Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 5.2e-54 214.2 111 100.0
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 8.7e-25 117.1 100 67.0
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 1.1e-24 116.7 102 65.7
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 3.7e-23 111.7 95 64.2
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.1e-22 110.2 96 65.6
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 5.3e-22 107.8 100 66.0
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 9.0e-22 107.1 95 65.3
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.5e-21 106.3 98 65.3
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 2.0e-21 105.9 111 62.2
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 3.4e-21 105.1 95 67.4
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 3.4e-21 105.1 100 65.0
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 4.5e-21 104.8 98 66.3
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 5.8e-21 104.4 102 60.8
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 7.6e-21 104.0 95 66.3
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 1.0e-20 103.6 99 65.7
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 1.0e-20 103.6 102 62.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.7e-20 102.8 102 61.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 3.8e-20 101.7 94 66.0
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 6.5e-20 100.9 96 64.6
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 8.4e-20 100.5 102 59.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 3.2e-19 98.6 98 60.2
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 3.2e-19 98.6 98 61.2
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 5.5e-19 97.8 96 63.5
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 5.5e-19 97.8 102 58.8
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 7.1e-19 97.4 100 58.0
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 7.1e-19 97.4 96 58.3
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 1.6e-18 96.3 96 61.5
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 2.1e-18 95.9 102 55.9
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.7e-18 95.5 100 59.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.7e-18 95.5 96 54.2
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.7e-18 95.5 94 57.4
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 3.5e-18 95.1 99 62.6
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 3.5e-18 95.1 100 54.0
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.5e-18 95.1 100 55.0
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.6e-18 94.7 100 59.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 6.0e-18 94.4 100 55.0
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 6.0e-18 94.4 96 59.4
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 7.9e-18 94.0 96 61.5
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.0e-17 93.6 108 56.5
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.0e-17 93.6 95 61.1
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 1.3e-17 93.2 101 55.4
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 2.3e-17 92.4 102 54.9
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.3e-17 92.4 95 62.1
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 3.0e-17 92.0 100 55.0
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 5.1e-17 91.3 100 58.0
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 5.1e-17 91.3 98 56.1
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 6.7e-17 90.9 103 57.3
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 6.7e-17 90.9 97 54.6
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.1e-16 90.1 108 54.6
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.1e-16 90.1 108 54.6
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.1e-16 90.1 98 57.1
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.5e-16 89.7 102 55.9
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.5e-16 89.7 96 59.4
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 2.5e-16 89.0 97 59.8
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 2.5e-16 89.0 104 56.7
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 2.5e-16 89.0 95 56.8
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 7.4e-16 87.4 90 55.6
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.6e-15 86.3 107 57.9
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.8e-15 85.5 107 57.0
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 2.8e-15 85.5 107 57.0
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 3.7e-15 85.1 98 51.0
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 8.2e-15 84.0 100 50.0
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.4e-14 83.2 101 50.5
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 6.9e-14 80.9 99 55.6
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 6.9e-14 80.9 85 58.8
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 9.0e-14 80.5 101 48.5
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 5.9e-13 77.8 99 54.5
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 5.9e-13 77.8 94 53.2
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 2.2e-12 75.9 125 45.6
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 2.9e-12 75.5 97 54.6
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 2.9e-12 75.5 105 52.4
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 2.9e-12 75.5 125 45.6
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 5.0e-12 74.7 99 53.5
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 5.0e-12 74.7 79 59.5
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 5.0e-12 74.7 83 57.8
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 6.5e-12 74.3 97 53.6
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 6.5e-12 74.3 97 53.6
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 8.5e-12 73.9 72 63.9
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 8.5e-12 73.9 83 57.8
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 3.2e-11 72.0 96 49.0
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 7.2e-11 70.9 98 52.0
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.2e-11 70.9 97 46.4
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 9.4e-11 70.5 99 51.5
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 9.4e-11 70.5 97 51.5
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 2.1e-10 69.3 97 51.5
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.6e-10 68.2 98 44.9
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 4.6e-10 68.2 97 45.4
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.0e-09 67.0 96 43.8
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.0e-09 67.0 99 46.5
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.0e-09 67.0 99 46.5
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 3.0e-09 65.5 94 48.9
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.5e-08 63.2 95 42.1
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 1.9e-08 62.8 93 50.5
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 2.5e-08 62.4 100 48.0
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 6.3e-07 57.8 99 41.4
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 6.3e-07 57.8 39 74.4
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.1e-06 57.0 39 71.8
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.8e-06 56.2 95 42.1


User provided reference genes

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