Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.9e-212 742.7 769 100.0
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.8e-201 706.8 768 95.4
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 9.1e-113 412.1 771 51.5
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 5.0e-87 326.6 771 64.1
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.9e-78 298.1 739 58.3
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.5e-75 288.5 771 55.4
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 4.4e-75 287.0 765 57.4
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 9.2e-73 279.3 732 52.2
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 2.8e-69 267.7 770 47.7
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 2.8e-69 267.7 772 47.3
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 6.2e-69 266.5 770 50.4
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 1.4e-68 265.4 769 43.8
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.2e-67 262.3 769 53.2
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.6e-67 261.2 770 50.3
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 6.0e-64 250.0 770 51.3
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 7.8e-64 249.6 767 52.7
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 8.6e-63 246.1 754 50.9
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 3.6e-61 240.7 755 46.2
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.4e-60 238.8 760 52.4
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.8e-59 233.4 768 51.4
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 7.1e-57 226.5 763 58.6
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-56 225.7 761 46.1
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.6e-56 225.3 767 50.3
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.5e-56 224.2 753 55.8
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.6e-56 223.8 755 40.0
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 6.0e-56 223.4 776 53.5
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.5e-54 218.0 778 40.1
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 3.3e-54 217.6 770 52.9
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 4.3e-54 217.2 687 62.2
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 4.3e-54 217.2 767 40.2
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.2e-53 215.7 754 49.2
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 6.2e-53 213.4 771 51.8
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 6.2e-53 213.4 768 52.3
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.8e-52 211.8 761 47.4
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.8e-52 211.8 752 42.4
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.4e-52 211.5 744 56.2
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.0e-52 210.7 752 41.0
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 4.0e-52 210.7 758 43.4
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 5.2e-52 210.3 744 40.3
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 3.4e-51 207.6 770 46.4
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 3.4e-51 207.6 767 46.9
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 9.9e-51 206.1 771 54.6
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 3.2e-49 201.1 729 46.5
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 5.4e-49 200.3 382 55.2
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 7.8e-48 196.4 247 55.9
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.0e-47 194.5 717 64.7
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 6.6e-47 193.4 326 58.0
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.4e-44 185.7 380 62.1
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.3e-44 183.7 203 58.1
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 9.0e-44 183.0 739 42.9
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 7.6e-43 179.9 774 49.5
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.7e-42 178.7 236 54.2
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 3.2e-41 174.5 742 47.4
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 1.6e-40 172.2 250 57.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.6e-40 172.2 347 48.1
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.0e-39 169.5 243 44.4
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 6.6e-39 166.8 348 54.6
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.1e-38 166.0 384 46.9
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 9.6e-38 162.9 342 59.9
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.3e-37 162.5 239 44.8
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.6e-37 162.2 349 48.4
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 2.1e-37 161.8 381 47.2
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.1e-36 159.5 371 51.5
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 1.8e-36 158.7 767 38.2
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 5.3e-36 157.1 749 45.3
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 9.0e-36 156.4 380 48.4
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 2.6e-35 154.8 377 43.0
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 5.8e-35 153.7 771 40.9
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 9.9e-35 152.9 768 43.2
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.9e-33 148.7 217 63.6
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 3.2e-33 147.9 341 44.3
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 3.2e-33 147.9 384 45.1
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 2.1e-32 145.2 372 45.4
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.7e-32 144.8 236 48.3
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 2.7e-32 144.8 744 40.5
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 3.5e-32 144.4 246 51.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.3e-31 141.7 379 48.5
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 5.1e-31 140.6 777 45.9
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 1.5e-30 139.0 773 43.9
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 5.6e-30 137.1 309 52.1
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.6e-29 135.6 391 55.2
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 6.2e-29 133.7 199 57.8
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 2.6e-27 128.3 369 43.1
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 7.6e-27 126.7 245 38.0
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 9.9e-27 126.3 318 55.0
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 1.4e-25 122.5 238 38.2
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 1.4e-25 122.5 238 38.2
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 3.2e-25 121.3 224 40.6
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.6e-24 119.0 382 46.1
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 2.1e-24 118.6 237 36.7
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 3.5e-24 117.9 237 33.8
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 6.0e-24 117.1 304 48.0
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 8.7e-23 113.2 246 37.0
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.9e-22 112.1 141 48.9
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 4.3e-22 110.9 379 46.7
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.3e-21 109.4 161 44.1
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 8.2e-21 106.7 124 50.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.8e-20 105.5 143 47.6
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 9.0e-20 103.2 171 45.6
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 3.4e-19 101.3 165 46.1
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-17 96.3 182 39.0
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.7e-16 91.7 147 47.6
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.8e-15 89.0 232 40.9
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.5e-14 85.9 91 57.1
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.9e-14 85.5 373 38.1
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.6e-13 82.4 324 29.0
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 3.1e-12 78.2 102 51.0
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 1.5e-11 75.9 99 46.5
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.3e-10 72.8 125 40.8
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.0e-10 70.9 68 60.3
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 3.2e-09 68.2 116 38.8
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 6.7e-07 60.5 312 38.5


User provided reference genes

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