Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036814 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D002328 1.0e-24 115.9 59 100.0
CSS0040299 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D002328 1.6e-17 92.0 69 75.4
CSS0030326 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D002328 3.9e-16 87.4 83 65.1
CSS0032578 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D002328 1.7e-14 82.0 83 63.9
Rhsim10G0099000 Rhododendron simsii HOM05D002156 ORTHO05D002328 3.2e-10 67.8 82 53.7
Actinidia34534 Actinidia chinensis HOM05D002156 ORTHO05D002328 9.4e-10 66.2 82 53.7
CSS0028846 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D002328 4.7e-09 63.9 78 57.7
Dinv26941 Davidia involucrata HOM05D002156 ORTHO05D002328 6.1e-09 63.5 82 51.2
Haze_15273 Corylus avellana HOM05D002156 ORTHO05D002328 1.0e-08 62.8 82 48.8
CiPaw.02G001800 Carya illinoinensis HOM05D002156 ORTHO05D002328 3.0e-08 61.2 82 48.8
PGR102G2375 Punica granatum HOM05D002156 ORTHO05D002328 1.1e-07 59.3 82 47.6
Duzib147G1396 Durio zibethinus HOM05D002156 ORTHO05D002328 1.5e-07 58.9 82 45.1
TAR381G0066 Trochodendron aralioides HOM05D002156 ORTHO05D002328 2.6e-07 58.2 79 48.1
Thecc.01G073700 Theobroma cacao HOM05D002156 ORTHO05D002328 4.4e-07 57.4 82 47.6
Lj7A108T18 Lonicera japonica HOM05D002156 ORTHO05D002328 5.7e-07 57.0 64 57.8
Gohir.A12G077600 Gossypium hirsutum HOM05D002156 ORTHO05D002328 7.4e-07 56.6 82 42.7
Gohir.D12G075800 Gossypium hirsutum HOM05D002156 ORTHO05D002328 7.4e-07 56.6 82 42.7
GSVIVG01002631001 Vitis vinifera HOM05D002156 ORTHO05D002328 9.7e-07 56.2 84 45.2
arahy.Tifrunner.gnm1.ann1.WVVG4E Arachis hypogaea HOM05D002156 ORTHO05D002328 1.3e-06 55.8 80 46.2
COL.COLO4_11588 Corchorus olitorius HOM05D002156 ORTHO05D002328 1.3e-06 55.8 79 45.6
Manes.12G115600 Manihot esculenta HOM05D002156 ORTHO05D002328 1.7e-06 55.5 82 45.1
Cc07_g07180 Coffea canephora HOM05D002156 ORTHO05D002328 2.2e-06 55.1 82 46.3
Eucgr.H02313 Eucalyptus grandis HOM05D002156 ORTHO05D002328 2.2e-06 55.1 82 45.1
Gorai.008G083300 Gossypium raimondii HOM05D002156 ORTHO05D002328 2.2e-06 55.1 82 41.5
THA.LOC104821209 Tarenaya hassleriana HOM05D002156 ORTHO05D002328 2.2e-06 55.1 82 42.7
TWI74G0945 Tripterygium wilfordii HOM05D002156 ORTHO05D002328 2.8e-06 54.7 82 42.7
Migut.H00340 Erythranthe guttata HOM05D002156 ORTHO05D002328 3.7e-06 54.3 81 46.9
EL10Ac6g15612 Beta vulgaris HOM05D002156 ORTHO05D002328 4.8e-06 53.9 82 42.7
AUR62004015 Chenopodium quinoa HOM05D002156 ORTHO05D002328 4.8e-06 53.9 82 43.9
arahy.Tifrunner.gnm1.ann1.DXU8TV Arachis hypogaea HOM05D002156 ORTHO05D002328 6.3e-06 53.5 80 45.0
AUR62007524 Chenopodium quinoa HOM05D002156 ORTHO05D002328 6.3e-06 53.5 82 42.7


User provided reference genes

Program Settings