Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 8.7e-50 199.9 94 100.0
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 1.1e-28 129.8 98 63.3
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 1.9e-28 129.0 67 91.0
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 1.9e-28 129.0 69 85.5
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 1.6e-27 125.9 66 89.4
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 3.5e-27 124.8 67 85.1
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 4.6e-27 124.4 67 83.6
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 7.9e-27 123.6 67 83.6
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 1.0e-26 123.2 67 82.1
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 2.3e-26 122.1 67 80.6
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 2.3e-26 122.1 67 83.6
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 2.3e-26 122.1 67 82.1
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 3.0e-26 121.7 67 83.6
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.0e-26 121.7 67 82.1
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 3.0e-26 121.7 67 82.1
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 5.1e-26 120.9 67 85.1
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 6.7e-26 120.6 67 83.6
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 8.7e-26 120.2 67 82.1
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 8.7e-26 120.2 67 82.1
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 1.9e-25 119.0 67 79.1
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 1.9e-25 119.0 67 79.1
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 2.5e-25 118.6 67 83.6
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 3.3e-25 118.2 67 83.6
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 4.3e-25 117.9 67 82.1
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 5.6e-25 117.5 67 82.1
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 7.4e-25 117.1 80 66.2
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 9.6e-25 116.7 67 79.1
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 1.3e-24 116.3 67 82.1
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 2.1e-24 115.5 67 79.1
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 3.7e-24 114.8 67 80.6
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 4.8e-24 114.4 68 69.1
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 4.8e-24 114.4 67 79.1
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 6.2e-24 114.0 65 78.5
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 8.2e-24 113.6 67 73.1
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 8.2e-24 113.6 67 73.1
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 8.2e-24 113.6 67 77.6
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 8.2e-24 113.6 67 77.6
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 8.2e-24 113.6 67 77.6
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 8.2e-24 113.6 66 75.8
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.1e-23 113.2 67 70.1
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 1.1e-23 113.2 67 71.6
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.1e-23 113.2 67 76.1
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 1.4e-23 112.8 79 69.6
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 1.4e-23 112.8 66 74.2
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 1.4e-23 112.8 67 73.1
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 1.4e-23 112.8 67 73.1
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.4e-23 112.8 67 76.1
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 1.8e-23 112.5 66 74.2
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 1.8e-23 112.5 67 76.1
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 1.8e-23 112.5 67 74.6
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 2.4e-23 112.1 67 71.6
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 3.1e-23 111.7 67 77.6
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 3.1e-23 111.7 67 77.6
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 1.2e-22 109.8 74 71.6
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 1.2e-22 109.8 67 74.6
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 1.2e-22 109.8 67 74.6
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 2.6e-22 108.6 67 73.1
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 2.6e-22 108.6 67 73.1
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 2.6e-22 108.6 66 71.2
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 4.5e-22 107.8 67 71.6
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 5.8e-22 107.5 57 84.2
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 5.8e-22 107.5 67 73.1
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 7.6e-22 107.1 57 82.5
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 1.0e-21 106.7 66 69.7
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 1.0e-21 106.7 66 69.7
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 1.0e-21 106.7 66 69.7
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 1.0e-21 106.7 66 69.7
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 1.0e-21 106.7 67 70.1
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 1.0e-21 106.7 57 80.7
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.0e-21 106.7 67 71.6
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.3e-21 106.3 67 67.2
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 1.7e-21 105.9 67 70.1
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 1.7e-21 105.9 66 74.2
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 1.7e-21 105.9 67 67.2
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 1.7e-21 105.9 57 78.9
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.7e-21 105.9 65 70.8
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.7e-21 105.9 65 70.8
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 2.2e-21 105.5 66 68.2
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 2.2e-21 105.5 66 69.7
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 2.2e-21 105.5 66 72.7
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 2.2e-21 105.5 67 65.7
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 2.9e-21 105.1 67 67.2
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 2.9e-21 105.1 67 67.2
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 2.9e-21 105.1 67 67.2
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 4.9e-21 104.4 67 67.2
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 4.9e-21 104.4 67 67.2
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 4.9e-21 104.4 67 67.2
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 4.9e-21 104.4 67 67.2
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 6.5e-21 104.0 66 71.2
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 1.4e-20 102.8 65 72.3
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 1.4e-20 102.8 67 65.7
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 1.4e-20 102.8 57 77.2
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 1.9e-20 102.4 67 71.6
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 3.2e-20 101.7 67 64.2
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 3.2e-20 101.7 67 65.7
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 3.2e-20 101.7 66 68.2
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 4.2e-20 101.3 67 73.1
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 4.2e-20 101.3 67 73.1
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 4.2e-20 101.3 67 73.1
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 4.2e-20 101.3 67 73.1
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 5.5e-20 100.9 67 64.2
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 1.2e-19 99.8 57 78.9
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 1.2e-19 99.8 57 75.4
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 1.2e-19 99.8 58 79.3
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 3.5e-19 98.2 64 65.6
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 3.5e-19 98.2 67 71.6
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 4.6e-19 97.8 64 68.8
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 6.0e-19 97.4 57 73.7
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 7.9e-19 97.1 67 70.1
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 2.3e-18 95.5 57 75.4
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 6.7e-18 94.0 56 71.4
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 6.7e-18 94.0 57 75.4
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 6.7e-18 94.0 57 71.9
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 1.9e-17 92.4 57 68.4
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 3.3e-17 91.7 66 68.2
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 4.3e-17 91.3 57 68.4
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 6.9e-15 84.0 66 56.1
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 5.9e-14 80.9 70 58.6
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 3.6e-11 71.6 83 47.0
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 1.5e-09 66.2 83 42.2
SGA_v2.0_scaffold29G12256 Striga asiatica HOM05D005454 ORTHO05D006781 2.5e-09 65.5 46 65.2
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 2.6e-06 55.5 67 38.8


User provided reference genes

Program Settings