Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 4.6e-194 681.0 336 100.0
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 9.9e-165 583.6 341 84.2
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.0e-161 573.5 339 83.8
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.8e-161 572.8 344 84.0
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 2.5e-160 568.9 349 82.8
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 3.3e-160 568.5 345 83.2
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 7.1e-155 550.8 342 81.9
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 1.6e-154 549.7 352 77.6
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.0e-153 545.4 318 84.6
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 3.1e-150 535.4 349 78.5
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 2.6e-149 532.3 356 77.2
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 4.5e-149 531.6 351 78.3
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 5.9e-149 531.2 351 76.9
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.1e-147 526.9 353 75.9
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.4e-147 526.6 351 77.5
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 9.4e-147 523.9 349 75.6
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 6.1e-146 521.2 369 72.9
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.4e-145 520.0 348 75.6
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 3.0e-145 518.8 351 74.4
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 3.9e-145 518.5 348 75.3
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 8.8e-145 517.3 349 73.6
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 2.0e-144 516.2 360 71.9
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 2.0e-144 516.2 348 75.0
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 3.3e-144 515.4 337 76.3
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 3.3e-144 515.4 341 76.2
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 3.3e-144 515.4 358 73.2
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 7.4e-144 514.2 353 75.4
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 7.4e-144 514.2 355 73.5
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 9.7e-144 513.8 348 73.0
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.3e-143 513.5 362 72.9
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.8e-143 512.3 355 73.8
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.8e-143 512.3 348 73.0
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 3.7e-143 511.9 348 73.3
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 3.7e-143 511.9 355 74.9
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 4.8e-143 511.5 354 74.0
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.8e-143 511.5 354 74.0
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.8e-143 511.5 355 73.5
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 6.3e-143 511.1 346 76.0
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 8.2e-143 510.8 352 73.6
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 8.2e-143 510.8 354 74.0
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.8e-142 509.6 352 74.4
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 4.1e-142 508.4 336 75.6
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 4.1e-142 508.4 360 71.7
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 6.9e-142 507.7 344 75.6
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 2.0e-141 506.1 362 71.5
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 2.6e-141 505.8 347 74.6
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 2.6e-141 505.8 341 75.1
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 7.7e-141 504.2 342 73.7
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 2.9e-140 502.3 364 73.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.8e-140 501.9 355 71.5
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.1e-139 500.4 348 73.9
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 2.5e-139 499.2 361 72.0
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 4.2e-139 498.4 363 71.9
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 4.2e-139 498.4 363 71.9
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.2e-138 496.9 360 71.7
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 2.1e-138 496.1 375 69.9
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 2.1e-138 496.1 375 69.9
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 1.0e-137 493.8 363 71.9
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.4e-137 493.4 362 71.0
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.4e-137 493.4 351 71.2
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.4e-137 493.4 347 71.8
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 2.3e-137 492.7 360 70.3
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 3.0e-137 492.3 368 68.8
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 5.1e-137 491.5 355 68.5
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 1.1e-136 490.3 360 70.6
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 1.5e-136 490.0 347 71.5
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.0e-136 489.6 358 69.6
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 2.0e-136 489.6 348 73.3
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 2.6e-136 489.2 359 69.6
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 4.4e-136 488.4 358 69.8
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 1.7e-135 486.5 350 68.3
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 1.7e-135 486.5 357 70.9
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 1.7e-135 486.5 362 68.0
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 4.8e-135 485.0 345 71.0
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 6.3e-135 484.6 354 69.2
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.4e-134 483.4 360 68.9
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 1.8e-134 483.0 360 68.6
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 3.1e-134 482.3 360 67.2
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 5.3e-134 481.5 360 68.1
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 9.1e-134 480.7 347 72.3
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.5e-133 479.9 360 67.5
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 7.7e-133 477.6 353 66.9
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 1.0e-132 477.2 362 66.9
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 1.0e-132 477.2 362 66.9
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.7e-132 476.5 340 70.6
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 8.5e-132 474.2 343 70.6
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 5.5e-131 471.5 353 69.1
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 9.4e-131 470.7 345 70.7
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 5.2e-129 464.9 352 68.8
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 3.3e-128 462.2 319 74.0
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 4.4e-128 461.8 430 59.3
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.3e-127 460.3 346 66.8
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 8.2e-127 457.6 327 72.2
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 1.8e-126 456.4 354 66.9
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 5.3e-126 454.9 346 66.2
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 3.2e-123 445.7 350 66.6
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 5.5e-123 444.9 327 71.6
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 5.5e-123 444.9 317 75.4
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 9.4e-123 444.1 358 64.5
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 9.4e-123 444.1 361 64.3
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 4.7e-122 441.8 363 63.1
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 7.5e-120 434.5 349 64.8
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 9.7e-120 434.1 325 68.3
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.7e-119 433.3 344 64.2
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.5e-112 410.2 337 60.5
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 3.7e-111 405.6 359 57.9
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 8.3e-111 404.4 297 66.0
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 7.0e-110 401.4 348 60.3
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 8.6e-108 394.4 282 73.0
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 1.0e-105 387.5 280 71.4
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 4.0e-105 385.6 324 60.5
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 4.1e-102 375.6 318 62.9
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 5.4e-102 375.2 194 90.2
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 1.6e-101 373.6 194 91.2
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 2.7e-101 372.9 287 70.4
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.7e-100 370.2 194 89.7
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.3e-100 369.8 300 62.7
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 1.9e-99 366.7 298 60.1
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 4.7e-98 362.1 349 55.9
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 8.0e-98 361.3 228 77.6
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 4.0e-97 359.0 299 58.2
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.0e-96 356.7 316 59.2
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.0e-96 356.7 343 53.4
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.4e-94 350.5 348 55.2
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 1.2e-93 347.4 297 56.2
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 6.4e-71 271.9 153 82.4
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 7.3e-67 258.5 206 66.0
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.6e-64 248.4 126 90.5
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 6.4e-55 218.8 197 58.4
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 4.5e-48 196.1 173 63.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.9e-47 192.6 332 40.1
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.9e-46 190.7 100 88.0
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.9e-35 154.1 125 65.6
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.9e-35 154.1 136 61.0
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 3.1e-33 146.7 102 75.5
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 6.1e-29 132.5 134 57.5
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.4e-28 131.3 88 72.7
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 5.1e-28 129.4 73 76.7
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 8.8e-28 128.6 73 76.7
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.7e-26 124.4 234 41.5
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.1e-14 85.1 111 44.1
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 5.2e-12 76.3 41 85.4
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 1.1e-09 68.6 74 59.5


User provided reference genes

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