Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 1.0e-193 679.9 340 100.0
CSS0023066 Camellia sinensis var. sinensis HOM05D000016 ORTHO05D000109 6.8e-12 75.9 113 42.5
CSS0004910 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D110427 3.4e-11 73.6 96 44.8
CSS0039050 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113140 3.4e-11 73.6 96 44.8
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 3.4e-11 73.6 79 54.4
CSS0014369 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D111829 5.8e-11 72.8 101 42.6
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 9.8e-11 72.0 124 39.5
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 4.9e-10 69.7 41 87.8
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 4.9e-10 69.7 41 87.8
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.4e-10 69.3 86 52.3
CSS0001713 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.9e-09 67.8 115 39.1
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-09 67.4 86 50.0
CSS0007125 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.2e-09 67.0 115 40.0
CSS0008378 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D109796 4.1e-09 66.6 80 47.5
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.1e-09 65.9 70 54.3
CSS0003407 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D109852 9.2e-09 65.5 96 41.7
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 9.2e-09 65.5 115 39.1
CSS0019089 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.2e-08 65.1 68 54.4
CSS0004875 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.6e-08 64.7 148 35.1
CSS0026582 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D112069 1.6e-08 64.7 87 43.7
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 2.1e-08 64.3 62 66.1
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 2.7e-08 63.9 62 62.9
CSS0036689 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.5e-08 63.5 86 50.0
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 3.5e-08 63.5 62 64.5
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 4.6e-08 63.2 70 51.4
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 4.6e-08 63.2 62 64.5
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 4.6e-08 63.2 62 64.5
CSS0023644 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D109120 6.0e-08 62.8 87 42.5
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 7.8e-08 62.4 106 39.6
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.0e-07 62.0 62 64.5
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 1.3e-07 61.6 55 67.3
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 1.7e-07 61.2 70 52.9
CSS0029947 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.7e-07 61.2 70 51.4
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.7e-07 61.2 63 65.1
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.7e-07 61.2 41 78.0
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 1.7e-07 61.2 62 64.5
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 1.7e-07 61.2 38 81.6
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 2.3e-07 60.8 62 62.9
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 5.1e-07 59.7 41 78.0
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 5.1e-07 59.7 63 63.5
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 5.1e-07 59.7 38 81.6
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 6.6e-07 59.3 70 51.4
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 8.6e-07 58.9 62 64.5
CSS0032039 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 8.6e-07 58.9 86 46.5
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 8.6e-07 58.9 63 60.3
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 8.6e-07 58.9 63 60.3
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 8.6e-07 58.9 49 63.3
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 8.6e-07 58.9 53 67.9
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.1e-06 58.5 38 78.9
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.1e-06 58.5 38 78.9
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.1e-06 58.5 38 78.9
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 1.1e-06 58.5 62 61.3
CSS0016074 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D109920 1.5e-06 58.2 96 37.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 1.5e-06 58.2 38 73.7
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 1.5e-06 58.2 39 82.1
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 2.5e-06 57.4 58 58.6
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 2.5e-06 57.4 38 76.3
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.5e-06 57.4 62 56.5
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.3e-06 57.0 79 48.1
CSS0027775 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.3e-06 57.0 100 42.0
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 3.3e-06 57.0 41 70.7
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 3.3e-06 57.0 53 66.0
CSS0036740 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.3e-06 56.6 107 36.4
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 4.3e-06 56.6 62 62.9
CSS0010281 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 5.6e-06 56.2 63 54.0
CSS0039815 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-06 56.2 151 33.8
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 9.5e-06 55.5 53 64.2


User provided reference genes

Program Settings