Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 5.7e-36 153.7 75 100.0
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 8.0e-14 80.1 74 56.8
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 1.4e-10 69.3 39 84.6
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 3.1e-10 68.2 68 55.9
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 3.1e-10 68.2 73 52.1
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 5.3e-10 67.4 42 73.8
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 5.3e-10 67.4 39 82.1
Os05g0532800 Oryza sativa ssp. japonica HOM05D038576 ORTHO05D010489 5.3e-10 67.4 50 58.0
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 9.1e-10 66.6 70 52.9
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 9.1e-10 66.6 70 52.9
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 3.5e-09 64.7 42 73.8
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 3.5e-09 64.7 42 73.8
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 3.5e-09 64.7 61 55.7
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 4.5e-09 64.3 38 78.9
vmacro15316 Vaccinium macrocarpon HOM05D008368 ORTHO05D010489 4.5e-09 64.3 46 67.4
MD13G1185300 Malus domestica HOM05D008368 ORTHO05D010489 5.9e-09 63.9 51 66.7
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 1.0e-08 63.2 70 47.1
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 1.7e-08 62.4 63 54.0
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.7e-08 62.4 39 74.4
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.7e-08 62.4 39 74.4
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 1.7e-08 62.4 40 70.0
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 3.8e-08 61.2 44 63.6
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 6.5e-08 60.5 58 50.0
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 6.5e-08 60.5 52 55.8
FAN22G0200 Fragaria x ananassa HOM05D008368 ORTHO05D010489 8.5e-08 60.1 39 69.2
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 1.1e-07 59.7 39 71.8
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 1.5e-07 59.3 39 69.2
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 1.5e-07 59.3 36 72.2
Zm00001eb353800 Zea mays HOM05D038576 ORTHO05D010489 1.9e-07 58.9 38 63.2
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 2.5e-07 58.5 35 71.4
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 3.2e-07 58.2 66 47.0
THA.LOC104818801 Tarenaya hassleriana HOM05D008368 ORTHO05D010489 3.2e-07 58.2 49 59.2
Ah.13g074090 Amaranthus hybridus HOM05D008368 ORTHO05D010489 4.2e-07 57.8 36 72.2
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 5.5e-07 57.4 34 70.6
Migut.G00302 Erythranthe guttata HOM05D008368 ORTHO05D010489 5.5e-07 57.4 39 69.2
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 5.5e-07 57.4 43 58.1
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 5.5e-07 57.4 34 70.6
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 5.5e-07 57.4 34 70.6
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 5.5e-07 57.4 74 41.9
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 1.6e-06 55.8 56 46.4
Thecc.04G224200 Theobroma cacao HOM05D008368 ORTHO05D010489 2.7e-06 55.1 39 59.0
Ca_00655_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 3.6e-06 54.7 34 67.6
TPR.G40393 Trifolium pratense HOM05D008368 ORTHO05D010489 6.1e-06 53.9 34 67.6
RcHm_v2.0_Chr0c32g0501461 Rosa chinensis HOM05D008368 ORTHO05D010489 8.0e-06 53.5 30 80.0
RcHm_v2.0_Chr0c32g0501651 Rosa chinensis HOM05D008368 ORTHO05D010489 8.0e-06 53.5 30 80.0


User provided reference genes

Program Settings