Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 9.4e-160 567.0 328 100.0
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 1.6e-143 513.1 328 87.8
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.6e-143 511.9 327 90.5
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.0e-142 510.4 328 90.5
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 6.3e-140 501.1 328 88.4
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.1e-139 500.4 327 73.1
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 9.2e-139 497.3 328 87.5
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 5.9e-138 494.6 329 87.8
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.3e-137 493.4 328 86.6
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.5e-136 490.0 328 85.1
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 3.3e-136 488.8 327 85.6
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 1.6e-135 486.5 326 85.0
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 2.8e-135 485.7 327 85.9
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 4.7e-135 485.0 325 71.7
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 4.7e-135 485.0 327 85.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.8e-134 483.0 329 86.3
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 2.3e-134 482.6 328 84.5
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 4.0e-134 481.9 328 84.5
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 4.0e-134 481.9 329 75.4
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 6.8e-134 481.1 329 84.8
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.5e-133 479.9 328 86.6
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 2.0e-133 479.6 328 84.1
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.0e-133 479.6 329 84.8
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.6e-133 479.2 325 69.5
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 2.6e-133 479.2 321 70.4
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 4.4e-133 478.4 325 81.2
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 4.4e-133 478.4 328 83.8
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 4.4e-133 478.4 328 82.9
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 7.5e-133 477.6 329 84.8
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 7.5e-133 477.6 324 86.7
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.9e-132 475.7 328 73.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 3.7e-132 475.3 328 82.0
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 3.7e-132 475.3 327 69.1
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 3.7e-132 475.3 325 68.9
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 6.4e-132 474.6 325 83.7
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 8.3e-132 474.2 328 68.3
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 8.3e-132 474.2 328 81.7
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 4.1e-131 471.9 325 80.3
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.1e-131 471.9 328 68.6
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 5.4e-131 471.5 328 83.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 5.4e-131 471.5 328 71.0
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 9.2e-131 470.7 330 83.0
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 9.2e-131 470.7 328 81.1
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.6e-130 469.9 328 82.0
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.6e-130 469.9 323 67.8
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.0e-130 469.5 326 68.1
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 2.7e-130 469.2 324 84.0
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 4.6e-130 468.4 326 69.0
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 4.6e-130 468.4 328 81.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 7.8e-130 467.6 328 68.3
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.0e-129 467.2 328 81.7
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.0e-129 467.2 328 84.1
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.3e-129 466.8 328 83.8
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.3e-129 466.8 328 82.6
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.7e-129 466.5 325 83.7
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.7e-129 466.5 328 74.4
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.9e-128 463.0 324 70.7
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 1.9e-128 463.0 328 66.5
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 2.5e-128 462.6 328 81.1
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.3e-128 462.2 328 67.7
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 4.3e-128 461.8 236 89.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.8e-126 456.4 330 67.0
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 5.2e-126 454.9 326 65.3
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.6e-125 452.6 328 66.2
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.6e-125 452.6 236 87.7
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.3e-124 450.3 324 65.4
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 6.4e-124 448.0 327 80.1
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.4e-123 446.8 325 65.5
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.4e-123 446.0 327 66.1
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.6e-122 441.8 324 79.0
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 7.8e-122 441.0 324 78.7
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.8e-122 441.0 324 71.9
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.3e-121 440.3 236 84.3
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.3e-121 440.3 324 78.7
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 7.3e-120 434.5 323 71.2
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.2e-119 433.7 322 76.7
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 3.1e-118 429.1 236 82.2
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 8.9e-118 427.6 323 77.4
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.5e-117 426.8 332 75.6
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.0e-117 426.4 322 77.3
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 3.4e-117 425.6 323 61.9
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 4.4e-117 425.2 369 57.5
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 5.8e-117 424.9 323 67.2
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 7.5e-117 424.5 329 74.8
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 2.2e-116 422.9 323 61.6
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.2e-116 422.9 323 61.9
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 3.7e-116 422.2 323 61.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 5.4e-115 418.3 323 60.7
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 1.6e-114 416.8 325 60.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.3e-113 413.7 327 60.6
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 2.3e-110 402.9 322 59.6
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 2.6e-109 399.4 317 74.4
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 3.2e-107 392.5 328 73.8
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 3.5e-106 389.0 231 74.0
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.5e-106 389.0 335 59.1
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.5e-104 383.6 311 73.3
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.7e-97 360.1 325 52.3
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.1e-96 357.5 279 83.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.5e-96 356.3 323 68.1
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 3.3e-96 355.9 323 68.7
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.1e-94 350.9 258 65.9
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.9e-92 342.8 263 81.7
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.3e-89 334.0 269 76.2
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 4.5e-85 318.9 249 64.7
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 6.0e-82 308.5 251 78.9
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 4.2e-75 285.8 247 75.3
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 4.3e-72 275.8 375 39.2
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 8.7e-65 251.5 247 67.2
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.1e-62 243.0 228 52.6
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 3.1e-62 243.0 138 80.4
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 5.3e-62 242.3 330 45.8
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.0e-60 238.0 191 61.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 6.1e-58 228.8 189 57.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 3.1e-54 216.5 126 77.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.2e-51 206.1 124 73.4
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.5e-43 180.3 94 86.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.2e-18 98.2 87 64.4
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 6.8e-17 92.4 85 49.4
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 7.3e-11 72.4 42 78.6
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.8e-09 65.9 41 73.2
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 2.2e-07 60.8 57 52.6
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-06 56.6 151 28.5


User provided reference genes

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