Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.7e-119 432.6 207 100.0
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 3.9e-119 431.4 207 99.5
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 1.1e-92 343.6 204 81.4
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 8.8e-87 323.9 204 77.5
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 2.4e-84 315.8 204 75.0
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 1.5e-83 313.2 210 73.3
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 2.2e-82 309.3 204 74.5
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 2.9e-82 308.9 204 75.0
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 1.4e-81 306.6 206 72.8
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.2e-80 303.5 206 71.8
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 2.7e-80 302.4 205 72.7
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 8.8e-79 297.4 204 71.6
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 2.0e-78 296.2 203 71.4
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 2.6e-78 295.8 204 71.6
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 3.3e-78 295.4 200 71.0
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 5.7e-78 294.7 202 72.3
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 5.7e-78 294.7 207 70.0
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 2.8e-77 292.4 204 70.1
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 3.7e-77 292.0 205 71.7
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 6.3e-77 291.2 199 70.9
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 8.2e-77 290.8 205 70.7
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.1e-76 290.4 206 67.0
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 1.2e-75 287.0 208 66.3
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 1.2e-75 287.0 209 67.9
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 1.2e-75 287.0 211 70.1
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 2.6e-75 285.8 207 66.7
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 4.5e-75 285.0 206 67.5
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 4.5e-75 285.0 205 68.8
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 5.9e-75 284.6 207 68.1
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 7.7e-75 284.3 205 70.2
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 1.0e-74 283.9 209 67.9
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 1.3e-74 283.5 209 66.5
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 1.3e-74 283.5 200 67.5
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 2.9e-74 282.3 193 68.4
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 5.0e-74 281.6 206 67.0
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 8.5e-74 280.8 209 67.0
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 8.5e-74 280.8 209 67.0
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 1.1e-73 280.4 205 68.8
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 1.1e-73 280.4 205 67.8
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 1.9e-73 279.6 204 68.6
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 1.9e-73 279.6 208 65.9
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 3.2e-73 278.9 203 68.0
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 4.2e-73 278.5 205 67.3
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 9.4e-73 277.3 205 66.8
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 6.1e-72 274.6 211 64.9
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 6.1e-72 274.6 207 64.7
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 3.0e-71 272.3 198 67.2
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 5.2e-71 271.6 205 67.3
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 6.7e-71 271.2 213 65.3
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 8.8e-71 270.8 221 62.4
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 8.8e-71 270.8 221 62.0
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 1.5e-70 270.0 205 66.3
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 1.5e-70 270.0 192 68.8
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 2.0e-70 269.6 211 66.8
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 2.6e-70 269.2 205 67.3
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 4.4e-70 268.5 207 65.7
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 5.7e-70 268.1 205 65.4
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 7.4e-70 267.7 205 66.3
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 2.2e-69 266.2 204 65.2
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 1.4e-68 263.5 205 62.4
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 1.8e-68 263.1 205 62.4
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 2.4e-68 262.7 204 62.3
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 2.4e-68 262.7 204 62.3
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 2.4e-68 262.7 204 61.8
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 5.3e-68 261.5 202 63.4
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 7.0e-68 261.2 204 64.2
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 9.1e-68 260.8 202 62.4
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 9.1e-68 260.8 211 64.0
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 1.2e-67 260.4 201 61.7
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.6e-67 260.0 203 62.1
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 1.6e-67 260.0 216 61.1
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 2.6e-67 259.2 201 61.2
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 3.5e-67 258.8 205 62.0
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 1.0e-66 257.3 200 61.5
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 2.2e-66 256.1 206 61.7
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 6.5e-66 254.6 202 61.4
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 1.1e-65 253.8 202 63.9
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 1.5e-65 253.4 203 63.5
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 1.9e-65 253.1 200 62.0
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 2.5e-65 252.7 200 63.0
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 2.5e-65 252.7 216 59.7
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 4.2e-65 251.9 198 64.1
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 7.2e-65 251.1 212 61.3
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 8.0e-64 247.7 203 60.1
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 8.0e-64 247.7 203 60.1
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 8.8e-63 244.2 201 61.7
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 2.0e-62 243.0 210 60.0
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 5.7e-62 241.5 199 61.8
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 3.7e-61 238.8 187 65.2
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 4.8e-61 238.4 196 62.2
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 8.2e-61 237.7 199 59.8
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.8e-60 236.5 198 60.1
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 3.2e-57 225.7 166 69.9
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 5.5e-57 224.9 182 61.0
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 1.2e-56 223.8 219 55.3
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.8e-55 219.9 192 60.4
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 2.3e-55 219.5 209 54.1
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 8.8e-55 217.6 175 65.1
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 5.9e-51 204.9 158 63.9
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 2.1e-48 196.4 157 59.9
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 1.5e-46 190.3 160 61.2
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 3.7e-45 185.7 173 59.0
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 3.5e-43 179.1 117 73.5
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 1.7e-42 176.8 234 42.7
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 5.0e-42 175.3 202 46.5
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 8.6e-42 174.5 225 45.8
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 1.1e-41 174.1 157 56.1
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 1.9e-41 173.3 209 46.4
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.2e-38 164.1 119 70.6
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 1.7e-37 160.2 234 38.5
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 6.4e-37 158.3 154 52.6
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 2.4e-28 129.8 154 44.2
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.0e-26 124.4 127 52.0
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 6.6e-26 121.7 120 57.5
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 5.2e-23 112.1 128 49.2
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 6.4e-21 105.1 64 76.6
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 6.2e-16 88.6 58 74.1
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 2.9e-13 79.7 48 72.9
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 6.4e-13 78.6 159 34.6
Cre14.g615250 Chlamydomonas reinhardtii HOM05D006792 ORTHO05D008489 1.2e-08 64.3 84 42.9
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.8e-08 63.2 68 48.5
Cre17.g702150 Chlamydomonas reinhardtii HOM05D005776 ORTHO05D007333 9.0e-07 58.2 86 34.9


User provided reference genes

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