Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036664 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 5.7e-77 290.8 143 100.0
CSS0011845 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 4.8e-76 287.7 143 98.6
vmacro16896 Vaccinium macrocarpon HOM05D005464 ORTHO05D006803 1.2e-55 219.9 130 82.3
Actinidia15983 Actinidia chinensis HOM05D005464 ORTHO05D006803 1.6e-55 219.5 129 79.1
Rhsim12G0191100 Rhododendron simsii HOM05D005464 ORTHO05D006803 7.5e-53 210.7 127 81.9
Lsat_1_v5_gn_4_89921 Lactuca sativa HOM05D005464 ORTHO05D006803 7.7e-50 200.7 141 71.6
PGR031G2541 Punica granatum HOM05D005464 ORTHO05D006803 7.7e-50 200.7 131 75.6
TAR383G0924 Trochodendron aralioides HOM05D005464 ORTHO05D006803 7.7e-50 200.7 140 73.6
Cfa001959 Carpinus fangiana HOM05D005464 ORTHO05D006803 1.7e-49 199.5 137 75.2
CANSAT56G0380 Cannabis sativa HOM05D005464 ORTHO05D006803 5.0e-49 198.0 146 68.5
RcHm_v2.0_Chr2g0135251 Rosa chinensis HOM05D005464 ORTHO05D006803 1.1e-48 196.8 149 67.8
Haze_16562 Corylus avellana HOM05D005464 ORTHO05D006803 1.5e-48 196.4 142 71.1
Manes.11G057000 Manihot esculenta HOM05D005464 ORTHO05D006803 2.5e-48 195.7 141 70.2
MSTRG.22747 Avicennia marina HOM05D005464 ORTHO05D006803 5.5e-48 194.5 132 76.5
ECA232G3027 Erigeron canadensis HOM05D005464 ORTHO05D006803 1.2e-47 193.4 136 73.5
Migut.I00762 Erythranthe guttata HOM05D005464 ORTHO05D006803 1.2e-47 193.4 130 75.4
FAN09G2673 Fragaria x ananassa HOM05D005464 ORTHO05D006803 1.2e-47 193.4 150 66.0
FAN14G5059 Fragaria x ananassa HOM05D005464 ORTHO05D006803 1.2e-47 193.4 150 66.0
TWI12G0099 Tripterygium wilfordii HOM05D005464 ORTHO05D006803 1.2e-47 193.4 143 66.4
Atru.chr1.2934 Acer truncatum HOM05D005464 ORTHO05D006803 2.1e-47 192.6 146 66.4
Eucgr.J03066 Eucalyptus grandis HOM05D005464 ORTHO05D006803 2.7e-47 192.2 130 74.6
Lj3g0027830 Lotus japonicus HOM05D005464 ORTHO05D006803 2.7e-47 192.2 136 69.9
Prupe.3G087600 Prunus persica HOM05D005464 ORTHO05D006803 3.6e-47 191.8 133 72.2
FvH4_6g29660 Fragaria vesca HOM05D005464 ORTHO05D006803 4.7e-47 191.4 149 65.1
Medtr2g103910 Medicago truncatula HOM05D005464 ORTHO05D006803 1.4e-46 189.9 143 67.8
Sc06g0005900 Simmondsia chinensis HOM05D005464 ORTHO05D006803 1.4e-46 189.9 135 70.4
PGSC0003DMG400028509 Solanum tuberosum HOM05D005464 ORTHO05D006803 1.4e-46 189.9 136 69.9
Solyc06g068160.3 Solanum lycopersicum HOM05D005464 ORTHO05D006803 1.8e-46 189.5 131 71.8
DCAR_021346 Daucus carota HOM05D005464 ORTHO05D006803 2.3e-46 189.1 133 71.4
CiPaw.02G157400 Carya illinoinensis HOM05D005464 ORTHO05D006803 4.0e-46 188.3 142 69.7
Sopen06g025430 Solanum pennellii HOM05D005464 ORTHO05D006803 5.2e-46 188.0 131 71.0
Hund06557 Selenicereus undatus HOM05D005464 ORTHO05D006803 6.8e-46 187.6 128 72.7
SGA_v2.0_scaffold5G02698 Striga asiatica HOM05D005464 ORTHO05D006803 6.8e-46 187.6 132 71.2
MD17G1212300 Malus domestica HOM05D005464 ORTHO05D006803 1.2e-45 186.8 142 66.9
Ca_01055_v3 Cicer arietinum L. HOM05D005464 ORTHO05D006803 1.5e-45 186.4 133 69.9
HanXRQChr16g0500301 Helianthus annuus HOM05D005464 ORTHO05D006803 1.5e-45 186.4 142 69.0
Nn8g39510 Nelumbo nucifera HOM05D005464 ORTHO05D006803 2.0e-45 186.0 124 72.6
Ciclev10026304m.g Citrus clementina HOM05D005464 ORTHO05D006803 2.6e-45 185.7 134 70.9
Nitab4.5_0006769g0010 Nicotiana tabacum HOM05D005464 ORTHO05D006803 3.4e-45 185.3 137 68.6
Cpa.g.sc10.270 Carica papaya HOM05D005464 ORTHO05D006803 4.4e-45 184.9 133 71.4
FAN05G5161 Fragaria x ananassa HOM05D005464 ORTHO05D006803 4.4e-45 184.9 149 64.4
TPR.G37199 Trifolium pratense HOM05D005464 ORTHO05D006803 4.4e-45 184.9 147 66.0
VMungo1080G0510 Vigna mungo HOM05D005464 ORTHO05D006803 5.7e-45 184.5 130 70.0
Psat5g302720 Pisum sativum HOM05D005464 ORTHO05D006803 9.8e-45 183.7 130 69.2
Glyma.15G007300 Glycine max HOM05D005464 ORTHO05D006803 1.3e-44 183.3 130 70.0
CAN.G1503.8 Capsicum annuum HOM05D005464 ORTHO05D006803 1.7e-44 183.0 127 70.9
Glyma.13G365800 Glycine max HOM05D005464 ORTHO05D006803 2.8e-44 182.2 134 69.4
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 2.8e-44 182.2 129 70.5
Nitab4.5_0000373g0080 Nicotiana tabacum HOM05D005464 ORTHO05D006803 3.7e-44 181.8 129 70.5
GSVIVG01017342001 Vitis vinifera HOM05D005464 ORTHO05D006803 3.7e-44 181.8 129 71.3
Phvul.005G178300 Phaseolus vulgaris HOM05D005464 ORTHO05D006803 4.8e-44 181.4 133 69.9
ClCG07G012450 Citrullus lanatus HOM05D005464 ORTHO05D006803 6.3e-44 181.0 133 70.7
THA.LOC104812511 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 8.3e-44 180.6 140 66.4
Aqoxy7G02293 Aquilegia oxysepala HOM05D005464 ORTHO05D006803 1.1e-43 180.3 142 66.2
EL10Ac9g21898 Beta vulgaris HOM05D005464 ORTHO05D006803 4.1e-43 178.3 136 67.6
CsaV3_4G001710 Cucumis sativus L. HOM05D005464 ORTHO05D006803 5.4e-43 177.9 128 71.9
Lalb_Chr14g0373811 Lupinus albus HOM05D005464 ORTHO05D006803 5.4e-43 177.9 147 61.9
MELO3C017863.2 Cucumis melo HOM05D005464 ORTHO05D006803 7.0e-43 177.6 128 71.9
Dinv30606 Davidia involucrata HOM05D005464 ORTHO05D006803 9.1e-43 177.2 131 74.8
PSO017G6540 Papaver somniferum HOM05D005464 ORTHO05D006803 1.2e-42 176.8 149 62.4
COL.COLO4_11947 Corchorus olitorius HOM05D005464 ORTHO05D006803 1.6e-42 176.4 128 69.5
AUR62016335 Chenopodium quinoa HOM05D005464 ORTHO05D006803 2.0e-42 176.0 127 68.5
Gohir.A05G123300 Gossypium hirsutum HOM05D005464 ORTHO05D006803 5.9e-42 174.5 130 67.7
Thecc.06G025100 Theobroma cacao HOM05D000467 ORTHO05D000379 7.7e-42 174.1 126 68.3
MBI14_g16402_MAGBIO Magnolia biondii HOM05D005464 ORTHO05D006803 1.0e-41 173.7 126 70.6
Sp1g13650 Schrenkiella parvula HOM05D005464 ORTHO05D006803 1.0e-41 173.7 132 65.2
unitig_0.g1114 Utricularia gibba HOM05D005464 ORTHO05D006803 1.0e-41 173.7 143 64.3
Gorai.009G128200 Gossypium raimondii HOM05D005464 ORTHO05D006803 3.8e-41 171.8 130 66.9
AL1G27420 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 6.5e-41 171.0 141 60.3
AT1G15330 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 7.2e-40 167.5 129 65.1
Carub.0001s1508 Capsella rubella HOM05D005464 ORTHO05D006803 9.5e-40 167.2 129 65.1
Lalb_Chr22g0350841 Lupinus albus HOM05D005464 ORTHO05D006803 9.5e-40 167.2 139 60.4
Zm00001eb232620 Zea mays HOM05D005464 ORTHO05D006803 1.2e-39 166.8 125 68.0
PSO170G0224 Papaver somniferum HOM05D005464 ORTHO05D006803 1.6e-39 166.4 151 58.9
BcaC05g25470 Brassica carinata HOM05D005464 ORTHO05D006803 3.6e-39 165.2 139 61.9
PGR102G0885 Punica granatum HOM05D005464 ORTHO05D006803 4.7e-39 164.9 128 64.1
Eucgr.F03878 Eucalyptus grandis HOM05D005464 ORTHO05D006803 6.1e-39 164.5 144 60.4
THA.LOC104812509 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 1.0e-38 163.7 127 67.7
Os02g0158900 Oryza sativa ssp. japonica HOM05D005464 ORTHO05D006803 1.4e-38 163.3 134 64.2
A06p11340 Brassica napus HOM05D005464 ORTHO05D006803 1.8e-38 162.9 136 61.8
BraA06t24313Z Brassica rapa HOM05D005464 ORTHO05D006803 1.8e-38 162.9 136 61.8
CARHR015860 Cardamine hirsuta HOM05D005464 ORTHO05D006803 3.0e-38 162.2 129 62.8
Thhalv10008048m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 4.0e-38 161.8 129 61.2
BolC5t30083H Brassica oleracea HOM05D005464 ORTHO05D006803 6.8e-38 161.0 146 58.2
Peaxi162Scf00207g00638 Petunia axillaris HOM05D005464 ORTHO05D006803 6.8e-38 161.0 117 69.2
AT1G80090 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 1.5e-37 159.8 126 65.1
Aa31LG7G100 Aethionema arabicum HOM05D005464 ORTHO05D006803 2.6e-37 159.1 143 57.3
C05p13460 Brassica napus HOM05D005464 ORTHO05D006803 3.4e-37 158.7 146 57.5
HPP92_016981 Vanilla planifolia HOM05D005464 ORTHO05D006803 9.8e-37 157.1 130 63.1
Gohir.D05G124200 Gossypium hirsutum HOM05D005464 ORTHO05D006803 2.8e-36 155.6 130 63.1
AUR62011516 Chenopodium quinoa HOM05D005464 ORTHO05D006803 4.9e-36 154.8 99 72.7
ATR0800G035 Amborella trichopoda HOM05D005464 ORTHO05D006803 4.1e-35 151.8 121 63.6
SHI11227 Sapria himalayana HOM05D005464 ORTHO05D006803 4.1e-35 151.8 121 63.6
AL2G41450 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.0e-33 147.1 134 59.0
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea HOM05D005464 ORTHO05D006803 2.3e-33 146.0 122 64.8
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea HOM05D005464 ORTHO05D006803 2.3e-33 146.0 122 64.8
Thhalv10019455m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 2.9e-33 145.6 126 61.9
BcaB02g08721 Brassica carinata HOM05D005464 ORTHO05D006803 5.0e-33 144.8 139 56.8
BcaC08g47570 Brassica carinata HOM05D005464 ORTHO05D006803 1.1e-32 143.7 146 57.5
C06p54250 Brassica napus HOM05D005464 ORTHO05D006803 1.1e-32 143.7 146 57.5
BolC6t40438H Brassica oleracea HOM05D005464 ORTHO05D006803 1.1e-32 143.7 146 57.5
A07p45420 Brassica napus HOM05D005464 ORTHO05D006803 1.9e-32 142.9 146 55.5
BraA07t32046Z Brassica rapa HOM05D005464 ORTHO05D006803 1.9e-32 142.9 146 55.5
AagrBONN_evm.TU.Sc2ySwM_344.2189 Anthoceros agrestis HOM05D005464 ORTHO05D006803 4.7e-31 138.3 129 51.2
SMO201G0050 Selaginella moellendorffii HOM05D005464 ORTHO05D006803 1.8e-30 136.3 125 54.4
Mapoly0007s0086 Marchantia polymorpha HOM05D005464 ORTHO05D006803 5.2e-30 134.8 113 54.9
Psat1g035880 Pisum sativum HOM05D005464 ORTHO05D006803 8.9e-30 134.0 102 65.7
AagrBONN_evm.TU.Sc2ySwM_368.1642 Anthoceros agrestis HOM05D005464 ORTHO05D006803 1.3e-28 130.2 116 49.1
CARHR074410 Cardamine hirsuta HOM05D005464 ORTHO05D006803 1.1e-27 127.1 92 66.3
Sp5g35710 Schrenkiella parvula HOM05D005464 ORTHO05D006803 1.1e-27 127.1 92 66.3
Pp3c3_23830 Physcomitrium patens HOM05D005464 ORTHO05D006803 3.2e-27 125.6 112 53.6
QL05p029759 Quercus lobata HOM05D005464 ORTHO05D006803 1.1e-22 110.5 131 51.9
QL05p030118 Quercus lobata HOM05D005464 ORTHO05D006803 1.1e-22 110.5 131 51.9
Hma1.2p1_1144F.1_g261310 Hydrangea macrophylla HOM05D005464 ORTHO05D006803 2.9e-20 102.4 85 63.5
Duzib160G0683 Durio zibethinus HOM05D005464 ORTHO05D006803 2.4e-19 99.4 77 63.6
Carub.0002s2743 Capsella rubella HOM05D005464 ORTHO05D006803 7.8e-18 94.4 70 65.7
PGR102G1999 Punica granatum HOM05D005464 ORTHO05D006803 7.3e-16 87.8 70 61.4
CBR_g24374 Chara braunii HOM05D005464 ORTHO05D006803 1.2e-15 87.0 125 35.2
Aa31LG4G370 Aethionema arabicum HOM05D005464 ORTHO05D006803 3.1e-14 82.4 68 54.4
Psat6g211360 Pisum sativum HOM05D005464 ORTHO05D006803 1.9e-08 63.2 95 44.2
Hma1.2p1_0090F.1_g046010 Hydrangea macrophylla HOM05D005464 ORTHO05D048341 8.9e-06 54.3 29 75.9
Hma1.2p1_0090F.1_g046015 Hydrangea macrophylla HOM05D005464 ORTHO05D048341 8.9e-06 54.3 29 75.9


User provided reference genes

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