Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036658 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 1.7e-60 235.7 114 100.0
CSS0026438 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.3e-57 225.3 114 97.4
CSS0013715 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.0e-53 212.2 103 98.1
THA.LOC104815684 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 2.6e-48 195.3 118 82.2
Duzib213G0525 Durio zibethinus HOM05D004608 ORTHO05D006533 4.4e-48 194.5 112 83.0
Duzib268G0270 Durio zibethinus HOM05D004608 ORTHO05D006533 5.8e-48 194.1 107 86.0
Gohir.A13G130142 Gossypium hirsutum HOM05D004608 ORTHO05D006533 7.5e-48 193.7 107 86.9
Dinv40894 Davidia involucrata HOM05D004608 ORTHO05D006533 1.7e-47 192.6 103 88.3
Potri.011G166100 Populus trichocarpa HOM05D004608 ORTHO05D006533 2.9e-47 191.8 116 81.0
Lj1C897G12 Lonicera japonica HOM05D004608 ORTHO05D006533 3.7e-47 191.4 105 85.7
Lalb_Chr15g0082461 Lupinus albus HOM05D004608 ORTHO05D006533 3.7e-47 191.4 103 88.3
Nn1g07694 Nelumbo nucifera HOM05D004608 ORTHO05D006533 3.7e-47 191.4 113 79.6
Potri.001G469300 Populus trichocarpa HOM05D004608 ORTHO05D006533 3.7e-47 191.4 116 80.2
Rhsim06G0233900 Rhododendron simsii HOM05D004608 ORTHO05D006533 3.7e-47 191.4 105 86.7
Sabra11G0139800 Salix brachista HOM05D004608 ORTHO05D006533 3.7e-47 191.4 117 79.5
vmacro11628 Vaccinium macrocarpon HOM05D004608 ORTHO05D006533 3.7e-47 191.4 105 86.7
GSVIVG01014786001 Vitis vinifera HOM05D004608 ORTHO05D006533 3.7e-47 191.4 115 80.9
Ciclev10008478m.g Citrus clementina HOM05D004608 ORTHO05D006533 4.9e-47 191.0 112 81.2
COL.COLO4_07760 Corchorus olitorius HOM05D004608 ORTHO05D006533 4.9e-47 191.0 104 87.5
Eucgr.F03661 Eucalyptus grandis HOM05D004608 ORTHO05D006533 4.9e-47 191.0 104 87.5
Gohir.D13G133200 Gossypium hirsutum HOM05D004608 ORTHO05D006533 4.9e-47 191.0 115 82.6
Gorai.013G149500 Gossypium raimondii HOM05D004608 ORTHO05D006533 4.9e-47 191.0 115 82.6
Glyma.08G337500 Glycine max HOM05D004608 ORTHO05D006533 6.4e-47 190.7 112 80.4
Glyma.18G072500 Glycine max HOM05D004608 ORTHO05D006533 6.4e-47 190.7 112 80.4
Gohir.D05G386600 Gossypium hirsutum HOM05D004608 ORTHO05D006533 6.4e-47 190.7 103 87.4
Gorai.009G453300 Gossypium raimondii HOM05D004608 ORTHO05D006533 6.4e-47 190.7 103 87.4
Hund22995 Selenicereus undatus HOM05D004608 ORTHO05D006533 8.3e-47 190.3 112 81.2
Ca_14850_v3 Cicer arietinum L. HOM05D004608 ORTHO05D006533 1.1e-46 189.9 103 85.4
ClCG09G021670 Citrullus lanatus HOM05D004608 ORTHO05D006533 1.1e-46 189.9 108 83.3
Atru.chr2.3848 Acer truncatum HOM05D004608 ORTHO05D006533 1.4e-46 189.5 112 83.0
MD11G1040100 Malus domestica HOM05D004608 ORTHO05D006533 1.4e-46 189.5 104 85.6
Prupe.6G031700 Prunus persica HOM05D004608 ORTHO05D006533 1.4e-46 189.5 112 80.4
Sabra16G0318300 Salix brachista HOM05D004608 ORTHO05D006533 1.4e-46 189.5 116 79.3
arahy.Tifrunner.gnm1.ann1.EI2AUC Arachis hypogaea HOM05D004608 ORTHO05D006533 1.9e-46 189.1 111 81.1
arahy.Tifrunner.gnm1.ann1.R4UTE8 Arachis hypogaea HOM05D004608 ORTHO05D006533 1.9e-46 189.1 111 81.1
Cfa016939 Carpinus fangiana HOM05D004608 ORTHO05D006533 1.9e-46 189.1 104 85.6
QL08p001615 Quercus lobata HOM05D004608 ORTHO05D006533 1.9e-46 189.1 112 80.4
TPR.G17932 Trifolium pratense HOM05D004608 ORTHO05D006533 1.9e-46 189.1 104 83.7
Migut.M01599 Erythranthe guttata HOM05D004608 ORTHO05D006533 2.4e-46 188.7 105 84.8
Psat5g164640 Pisum sativum HOM05D004608 ORTHO05D006533 2.4e-46 188.7 103 84.5
TWI38G1265 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 2.4e-46 188.7 103 86.4
CiPaw.12G141700 Carya illinoinensis HOM05D004608 ORTHO05D006533 3.2e-46 188.3 104 85.6
Thhalv10020839m.g Eutrema salsugineum HOM05D004608 ORTHO05D006533 3.2e-46 188.3 104 87.5
MD03G1039600 Malus domestica HOM05D004608 ORTHO05D006533 3.2e-46 188.3 104 84.6
Thecc.07G005400 Theobroma cacao HOM05D004608 ORTHO05D006533 3.2e-46 188.3 101 87.1
VMungo0540G0162 Vigna mungo HOM05D004608 ORTHO05D006533 3.2e-46 188.3 112 79.5
AL3G25090 Arabidopsis lyrata HOM05D004608 ORTHO05D006533 4.1e-46 188.0 117 80.3
Peaxi162Scf00219g00158 Petunia axillaris HOM05D004608 ORTHO05D006533 4.1e-46 188.0 105 83.8
PGR031G2516 Punica granatum HOM05D004608 ORTHO05D006533 4.1e-46 188.0 104 84.6
Sp3g11470 Schrenkiella parvula HOM05D004608 ORTHO05D006533 4.1e-46 188.0 116 81.0
TWI38G2408 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 4.1e-46 188.0 103 86.4
Nitab4.5_0007214g0010 Nicotiana tabacum HOM05D004608 ORTHO05D006533 5.4e-46 187.6 115 80.0
Cc05_g15480 Coffea canephora HOM05D004608 ORTHO05D006533 7.0e-46 187.2 114 77.2
Haze_09894 Corylus avellana HOM05D004608 ORTHO05D006533 7.0e-46 187.2 104 84.6
CSS0047803 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 9.2e-46 186.8 105 82.9
Carub.0003s1265 Capsella rubella HOM05D004608 ORTHO05D006533 9.2e-46 186.8 116 80.2
THA.LOC104801910 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 9.2e-46 186.8 117 78.6
THA.LOC104810298 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 9.2e-46 186.8 117 78.6
AT3G13235 Arabidopsis thaliana HOM05D004608 ORTHO05D006533 1.2e-45 186.4 116 80.2
Lj6g0013957 Lotus japonicus HOM05D004608 ORTHO05D006533 1.2e-45 186.4 112 77.7
MBI14_g00953_MAGBIO Magnolia biondii HOM05D004608 ORTHO05D006533 1.2e-45 186.4 115 78.3
SGA_v2.0_scaffold168G38588 Striga asiatica HOM05D004608 ORTHO05D006533 1.2e-45 186.4 104 82.7
Actinidia30368 Actinidia chinensis HOM05D004608 ORTHO05D006533 1.6e-45 186.0 105 82.9
HanXRQChr11g0334621 Helianthus annuus HOM05D004608 ORTHO05D006533 1.6e-45 186.0 105 83.8
Gohir.A04G003100 Gossypium hirsutum HOM05D004608 ORTHO05D006533 2.7e-45 185.3 103 85.4
Ah.06g180960 Amaranthus hybridus HOM05D004608 ORTHO05D006533 3.5e-45 184.9 115 78.3
HanXRQChr05g0160221 Helianthus annuus HOM05D004608 ORTHO05D006533 3.5e-45 184.9 105 83.8
Manes.05G206400 Manihot esculenta HOM05D004608 ORTHO05D006533 3.5e-45 184.9 102 85.3
Nitab4.5_0001622g0040 Nicotiana tabacum HOM05D004608 ORTHO05D006533 3.5e-45 184.9 105 82.9
MSTRG.7029 Avicennia marina HOM05D004608 ORTHO05D006533 4.6e-45 184.5 105 82.9
EL10Ac4g07509 Beta vulgaris HOM05D004608 ORTHO05D006533 6.0e-45 184.1 105 83.8
A03p38110 Brassica napus HOM05D004608 ORTHO05D006533 6.0e-45 184.1 116 79.3
BraA03t12964Z Brassica rapa HOM05D004608 ORTHO05D006533 6.0e-45 184.1 116 79.3
CANSAT11G0422 Cannabis sativa HOM05D004608 ORTHO05D006533 6.0e-45 184.1 103 82.5
CARHR087890 Cardamine hirsuta HOM05D004608 ORTHO05D006533 6.0e-45 184.1 116 77.6
CsaV3_7G021370 Cucumis sativus L. HOM05D004608 ORTHO05D006533 6.0e-45 184.1 104 83.7
Sed0006020 Sechium edule HOM05D004608 ORTHO05D006533 6.0e-45 184.1 112 78.6
Cpa.g.sc12.91 Carica papaya HOM05D004608 ORTHO05D006533 7.8e-45 183.7 103 84.5
Phvul.006G060300 Phaseolus vulgaris HOM05D004608 ORTHO05D006533 1.0e-44 183.3 110 77.3
Solyc10g005890.3 Solanum lycopersicum HOM05D004608 ORTHO05D006533 1.0e-44 183.3 103 81.6
Sopen10g001840 Solanum pennellii HOM05D004608 ORTHO05D006533 1.0e-44 183.3 103 81.6
Sed0022757 Sechium edule HOM05D004608 ORTHO05D006533 1.3e-44 183.0 104 82.7
ECA236G2785 Erigeron canadensis HOM05D004608 ORTHO05D006533 1.7e-44 182.6 105 81.9
Lsat_1_v5_gn_7_116460 Lactuca sativa HOM05D004608 ORTHO05D006533 1.7e-44 182.6 103 83.5
Aqoxy4G02317 Aquilegia oxysepala HOM05D004608 ORTHO05D006533 2.3e-44 182.2 113 77.9
CAN.G492.45 Capsicum annuum HOM05D004608 ORTHO05D006533 3.0e-44 181.8 105 82.9
DCAR_017596 Daucus carota HOM05D004608 ORTHO05D006533 3.0e-44 181.8 105 79.0
FvH4_3g42010 Fragaria vesca HOM05D004608 ORTHO05D006533 3.0e-44 181.8 104 81.7
FAN11G3108 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.0e-44 181.8 104 81.7
FAN16G3187 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.0e-44 181.8 104 81.7
FAN21G2140 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.0e-44 181.8 104 81.7
FAN25G0703 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.0e-44 181.8 104 81.7
C01p51800 Brassica napus HOM05D004608 ORTHO05D006533 3.9e-44 181.4 116 77.6
PGSC0003DMG400014406 Solanum tuberosum HOM05D004608 ORTHO05D006533 3.9e-44 181.4 104 81.7
AUR62035639 Chenopodium quinoa HOM05D004608 ORTHO05D006533 1.5e-43 179.5 113 77.0
Oeu026626.2 Olea europaea HOM05D004608 ORTHO05D006533 1.9e-43 179.1 104 81.7
RcHm_v2.0_Chr5g0075221 Rosa chinensis HOM05D004608 ORTHO05D006533 1.9e-43 179.1 104 80.8
CDE05G1663 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 2.5e-43 178.7 101 83.2
ATR0587G001 Amborella trichopoda HOM05D004608 ORTHO05D006533 3.3e-43 178.3 117 75.2
PSO541G2325 Papaver somniferum HOM05D004608 ORTHO05D006533 4.3e-43 177.9 110 74.5
AUR62017165 Chenopodium quinoa HOM05D004608 ORTHO05D006533 1.6e-42 176.0 112 76.8
BolC3t16895H Brassica oleracea HOM05D004608 ORTHO05D006533 2.8e-42 175.3 110 80.0
HPP92_021912 Vanilla planifolia HOM05D004608 ORTHO05D006533 2.8e-42 175.3 101 79.2
C03p46240 Brassica napus HOM05D004608 ORTHO05D006533 3.6e-42 174.9 121 74.4
Os02g0198600 Oryza sativa ssp. japonica HOM05D004608 ORTHO05D006533 3.1e-41 171.8 102 79.4
A01p40280 Brassica napus HOM05D004608 ORTHO05D006533 8.9e-41 170.2 117 74.4
BraA01t04064Z Brassica rapa HOM05D004608 ORTHO05D006533 8.9e-41 170.2 117 74.4
AL5G25300 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 3.4e-40 168.3 104 80.8
Zm00001eb205890 Zea mays HOM05D004608 ORTHO05D006533 4.4e-40 167.9 92 81.5
MELO3C013214.2 Cucumis melo HOM05D004608 ORTHO05D006533 7.5e-40 167.2 104 78.8
Aa31LG8G500 Aethionema arabicum HOM05D004608 ORTHO05D006533 1.1e-38 163.3 128 68.0
TAR626G0684 Trochodendron aralioides HOM05D004608 ORTHO05D006533 2.7e-37 158.7 81 87.7
AagrBONN_evm.TU.Sc2ySwM_117.3155 Anthoceros agrestis HOM05D004608 ORTHO05D006533 1.3e-36 156.4 106 64.2
Pp3c4_20890 Physcomitrium patens HOM05D004608 ORTHO05D006533 2.5e-35 152.1 102 67.6
Mapoly0030s0110 Marchantia polymorpha HOM05D004608 ORTHO05D006533 3.3e-35 151.8 110 64.5
Oeu019695.1 Olea europaea HOM05D004608 ORTHO05D006533 3.3e-35 151.8 105 71.4
CDE05G0237 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 5.2e-33 144.4 134 57.5
CBR_g36902 Chara braunii HOM05D004608 ORTHO05D006533 8.9e-33 143.7 86 70.9
Actinidia10581 Actinidia chinensis HOM05D004608 ORTHO05D006533 2.2e-31 139.0 80 81.2
AL3G34310 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 4.3e-27 124.8 117 58.1
CSS0047513 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.4e-25 119.0 58 94.8
BolC1t05127H Brassica oleracea HOM05D004608 ORTHO05D006533 1.2e-24 116.7 116 56.9
unitig_699.g19599 Utricularia gibba HOM05D004608 ORTHO05D006533 8.4e-23 110.5 104 48.1
TAR624G0837 Trochodendron aralioides HOM05D004608 ORTHO05D006533 1.1e-22 110.2 117 54.7
Hma1.2p1_0193F.1_g084100 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 3.2e-22 108.6 102 59.8
Hma1.2p1_2995F.1_g331425 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 3.2e-22 108.6 102 59.8
Pp3c17_4800 Physcomitrium patens HOM05D004608 ORTHO05D006533 3.2e-22 108.6 72 61.1
MCO11G772 Micromonas commoda HOM05D004608 ORTHO05D006533 1.3e-20 103.2 89 51.7
PRCOL_00000426 Prasinoderma coloniale HOM05D004608 ORTHO05D006533 1.3e-20 103.2 110 46.4
Cre10.g447300 Chlamydomonas reinhardtii HOM05D004608 ORTHO05D006533 3.0e-20 102.1 94 52.1
Aa31LG10G470 Aethionema arabicum HOM05D004608 ORTHO05D006533 8.1e-18 94.0 109 45.9
Cfa022177 Carpinus fangiana HOM05D004608 ORTHO05D006533 1.8e-17 92.8 101 41.6
VMungo0954G0002 Vigna mungo HOM05D004608 ORTHO05D432787 9.0e-17 90.5 47 83.0
unitig_899.g15266 Utricularia gibba HOM05D004608 ORTHO05D006533 3.4e-16 88.6 47 78.7
Aa31LG10G450 Aethionema arabicum HOM05D004608 ORTHO05D006533 3.8e-15 85.1 82 51.2
Glyma.10G116100 Glycine max HOM05D004608 ORTHO05D021061 4.0e-09 65.1 50 56.0
Sc03g0011700 Simmondsia chinensis HOM05D004608 ORTHO05D006533 2.9e-07 58.9 37 75.7


User provided reference genes

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