Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 4.8e-67 257.7 128 100.0
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.6e-65 251.9 128 97.7
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.0e-53 213.4 126 81.7
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.2e-49 199.9 123 77.2
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.5e-49 199.5 120 80.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 7.6e-49 197.2 123 75.6
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 8.4e-48 193.7 123 74.0
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.9e-47 192.6 118 75.4
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.9e-47 192.6 110 83.6
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 1.9e-47 192.6 120 75.0
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 4.2e-47 191.4 121 75.2
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 4.2e-47 191.4 125 74.4
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 4.2e-47 191.4 121 73.6
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 9.3e-47 190.3 130 73.1
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 9.3e-47 190.3 121 75.2
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.2e-46 189.9 127 72.4
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 2.1e-46 189.1 127 70.9
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 2.7e-46 188.7 118 76.3
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.7e-46 188.7 120 74.2
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 3.5e-46 188.3 130 72.3
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 4.6e-46 188.0 120 72.5
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.0e-45 186.8 128 69.5
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.3e-45 186.4 126 72.2
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 3.0e-45 185.3 120 74.2
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 3.9e-45 184.9 119 73.9
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.9e-45 184.9 117 74.4
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 3.9e-45 184.9 127 70.9
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 5.1e-45 184.5 119 73.1
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.7e-45 184.1 123 74.0
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.1e-44 183.3 120 70.0
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.5e-44 183.0 118 75.4
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.9e-44 182.6 120 70.0
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.9e-44 182.6 119 72.3
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 2.5e-44 182.2 121 71.9
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.5e-44 182.2 133 70.7
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 9.7e-44 180.3 122 68.0
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.3e-43 179.9 119 72.3
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 1.3e-43 179.9 126 69.0
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.3e-43 179.9 120 70.0
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.2e-43 179.1 118 72.9
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 3.7e-43 178.3 120 69.2
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 3.7e-43 178.3 122 69.7
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 3.7e-43 178.3 119 71.4
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 4.8e-43 177.9 130 68.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 4.8e-43 177.9 120 71.7
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 6.3e-43 177.6 110 77.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 6.3e-43 177.6 119 70.6
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.4e-42 176.4 126 67.5
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 1.4e-42 176.4 120 70.0
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 1.4e-42 176.4 120 72.5
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 3.1e-42 175.3 121 65.3
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 5.3e-42 174.5 120 66.7
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.2e-41 173.3 120 66.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 2.0e-41 172.6 116 69.0
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 2.6e-41 172.2 119 64.7
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 7.7e-41 170.6 141 61.7
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.0e-40 170.2 120 70.8
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.3e-40 169.9 128 63.3
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.3e-40 169.9 118 68.6
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.7e-40 169.5 150 60.7
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 2.2e-40 169.1 119 63.0
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 2.9e-40 168.7 120 63.3
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 2.9e-40 168.7 120 63.3
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 2.9e-40 168.7 119 63.0
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 2.9e-40 168.7 120 63.3
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 2.9e-40 168.7 122 63.1
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 3.8e-40 168.3 120 63.3
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 6.5e-40 167.5 120 65.0
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.1e-39 166.8 122 68.9
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.4e-39 166.4 120 62.5
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.4e-39 166.4 104 74.0
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.9e-39 166.0 128 60.9
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 2.5e-39 165.6 127 65.4
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 3.2e-39 165.2 120 61.7
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 7.9e-38 160.6 120 60.8
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 5.1e-37 157.9 120 60.0
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 8.8e-37 157.1 102 71.6
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.5e-36 155.6 130 56.9
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.3e-36 155.2 104 73.1
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.8e-34 149.4 116 59.5
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.2e-33 146.7 113 63.7
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.0e-32 143.7 130 59.2
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 3.0e-29 132.1 79 78.5
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 6.3e-27 124.4 80 76.2
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.2e-27 124.0 80 76.2
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 9.1e-26 120.6 115 50.4
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.5e-25 119.8 130 48.5
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 9.4e-23 110.5 111 48.6
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.6e-22 109.8 78 69.2
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.8e-21 106.3 59 84.7
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 2.2e-19 99.4 112 48.2
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.8e-18 96.3 79 62.0
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 3.0e-13 79.0 104 42.3
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.1e-10 70.5 51 66.7
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.4e-10 70.1 85 45.9
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 2.0e-09 66.2 101 42.6


User provided reference genes

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