Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 3.0e-63 245.0 120 100.0
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 5.3e-28 127.9 127 57.5
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 9.7e-22 107.1 105 59.0
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 2.4e-20 102.4 82 64.6
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 1.3e-18 96.7 87 62.1
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.3e-18 96.7 138 49.3
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 1.7e-18 96.3 106 54.7
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 2.9e-18 95.5 122 49.2
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 5.0e-18 94.7 120 51.7
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 8.5e-18 94.0 99 53.5
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 8.5e-18 94.0 94 56.4
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 3.2e-17 92.0 98 58.2
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 5.5e-17 91.3 108 59.3
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 7.2e-17 90.9 104 54.8
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 9.4e-17 90.5 116 48.3
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.7e-16 89.0 93 57.0
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.6e-16 88.6 93 57.0
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.3e-15 85.9 93 54.8
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 4.0e-15 85.1 109 51.4
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 1.2e-14 83.6 117 47.9
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.2e-14 83.6 128 46.1
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.2e-14 83.6 108 51.9
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.0e-14 82.8 95 54.7
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 2.0e-14 82.8 106 51.9
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 3.4e-14 82.0 96 54.2
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 4.4e-14 81.6 76 56.6
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 4.4e-14 81.6 76 56.6
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 4.4e-14 81.6 76 56.6
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 4.4e-14 81.6 121 49.6
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 4.4e-14 81.6 100 53.0
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 4.4e-14 81.6 80 61.2
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 5.7e-14 81.3 64 56.2
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 7.5e-14 80.9 95 52.6
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 1.3e-13 80.1 94 54.3
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.3e-13 80.1 94 54.3
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.3e-13 80.1 119 47.9
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.7e-13 79.7 103 46.6
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.7e-13 79.7 92 54.3
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 2.2e-13 79.3 117 48.7
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 2.8e-13 79.0 117 48.7
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 6.3e-13 77.8 100 53.0
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 8.3e-13 77.4 124 44.4
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.1e-12 77.0 114 48.2
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 1.4e-12 76.6 56 64.3
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 1.8e-12 76.3 109 49.5
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 1.8e-12 76.3 71 57.7
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 3.1e-12 75.5 66 65.2
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 3.1e-12 75.5 101 49.5
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 3.1e-12 75.5 64 57.8
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 4.1e-12 75.1 143 41.3
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 7.0e-12 74.3 107 48.6
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 7.0e-12 74.3 94 46.8
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 1.6e-11 73.2 73 54.8
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 1.6e-11 73.2 40 80.0
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 7.7e-11 70.9 80 53.8
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 7.7e-11 70.9 80 53.8
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.0e-10 70.5 78 53.8
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 1.0e-10 70.5 75 49.3
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 1.3e-10 70.1 77 50.6
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 1.7e-10 69.7 85 54.1
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.3e-10 69.3 74 48.6
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 2.3e-10 69.3 92 47.8
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 2.9e-10 68.9 99 43.4
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 2.9e-10 68.9 111 45.0
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 6.6e-10 67.8 103 47.6
Actinidia15990 Actinidia chinensis HOM05D007722 ORTHO05D009730 8.6e-10 67.4 119 45.4
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 1.5e-09 66.6 119 43.7
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 1.9e-09 66.2 75 52.0
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.5e-09 65.9 74 51.4
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 5.5e-09 64.7 119 39.5
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 9.5e-09 63.9 77 49.4
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 9.5e-09 63.9 71 54.9
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 4.7e-08 61.6 54 50.0
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.0e-07 60.5 115 40.9
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 1.4e-07 60.1 122 39.3
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 3.0e-07 58.9 121 36.4
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 6.8e-07 57.8 70 47.1
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 8.9e-07 57.4 54 46.3
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 8.9e-07 57.4 54 46.3
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 1.5e-06 56.6 106 41.5
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 7.5e-06 54.3 123 38.2


User provided reference genes

Program Settings