Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036601 Camellia sinensis var. sinensis HOM05D007742 ORTHO05D004072 7.2e-251 870.2 455 100.0
CSS0018935 Camellia sinensis var. sinensis HOM05D007742 ORTHO05D004072 1.1e-185 653.7 519 73.4
Actinidia37712 Actinidia chinensis HOM05D007742 ORTHO05D004072 2.0e-104 383.6 528 47.9
Hma1.2p1_0868F.1_g230420 Hydrangea macrophylla HOM05D007742 ORTHO05D004072 2.3e-79 300.4 516 43.0
Rhsim08G0038200 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.1e-78 298.1 511 40.5
Dinv33270 Davidia involucrata HOM05D007742 ORTHO05D004072 2.2e-66 257.3 477 40.9
vmacro18397 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 4.8e-61 239.6 517 36.8
vmacro18395 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 1.1e-41 175.3 318 40.9
QL02p069032 Quercus lobata HOM05D007742 ORTHO05D004072 4.8e-37 159.8 507 32.3
Cc07_g01400 Coffea canephora HOM05D007742 ORTHO05D004072 8.2e-37 159.1 480 29.4
Prupe.3G314400 Prunus persica HOM05D007742 ORTHO05D004072 4.1e-36 156.8 512 30.9
QL02p069122 Quercus lobata HOM05D007742 ORTHO05D004072 6.5e-34 149.4 499 32.3
Haze_14967 Corylus avellana HOM05D007742 ORTHO05D004072 1.1e-33 148.7 517 30.6
QL02p068827 Quercus lobata HOM05D007742 ORTHO05D004072 4.2e-33 146.7 494 31.4
CiPaw.15G155500 Carya illinoinensis HOM05D007742 ORTHO05D004072 2.0e-30 137.9 502 29.3
Cfa007153 Carpinus fangiana HOM05D007742 ORTHO05D004072 3.7e-29 133.7 521 30.1
Ciclev10014656m.g Citrus clementina HOM05D007742 ORTHO05D004072 7.0e-28 129.4 494 30.0
Peaxi162Scf00420g00831 Petunia axillaris HOM05D007742 ORTHO05D004072 4.7e-24 116.7 490 29.8
Manes.04G094400 Manihot esculenta HOM05D007742 ORTHO05D004072 5.2e-23 113.2 291 31.6
Rhsim04G0137500 Rhododendron simsii HOM05D007742 ORTHO05D010160 1.8e-20 104.8 190 38.9
Atru.chr6.2712 Acer truncatum HOM05D007742 ORTHO05D004072 1.2e-19 102.1 506 28.3
Lj7A618T68 Lonicera japonica HOM05D007742 ORTHO05D004072 1.2e-19 102.1 359 30.6
QL09p009056 Quercus lobata HOM05D004225 ORTHO05D004728 1.6e-16 91.7 234 34.6
Lj1g0006134 Lotus japonicus HOM05D007742 ORTHO05D004072 4.7e-16 90.1 279 30.1
Duzib138G0881 Durio zibethinus HOM05D007742 ORTHO05D004072 1.0e-15 89.0 325 29.5
Ciclev10014788m.g Citrus clementina HOM05D007742 ORTHO05D004072 3.0e-15 87.4 452 26.3
VMungo1383G1777 Vigna mungo HOM05D007742 ORTHO05D004072 5.2e-15 86.7 282 28.0
Dinv08643 Davidia involucrata HOM05D004007 ORTHO05D005127 2.6e-14 84.3 147 42.9
VMungo0464G0864 Vigna mungo HOM05D007742 ORTHO05D004072 3.4e-14 84.0 286 27.6
Phvul.001G079300 Phaseolus vulgaris HOM05D007742 ORTHO05D004072 8.3e-13 79.3 284 26.8
QL02p069084 Quercus lobata HOM05D007742 ORTHO05D004072 1.8e-12 78.2 172 39.0
arahy.Tifrunner.gnm1.ann1.L07F2C Arachis hypogaea HOM05D007742 ORTHO05D004072 4.1e-12 77.0 470 24.9
arahy.Tifrunner.gnm1.ann1.H02ZFL Arachis hypogaea HOM05D007742 ORTHO05D004072 1.2e-11 75.5 473 24.9
Glyma.19G105400 Glycine max HOM05D007742 ORTHO05D004072 1.6e-11 75.1 288 26.4
PGR142G3827 Punica granatum HOM05D007742 ORTHO05D004072 5.9e-11 73.2 308 25.3
Potri.009G112676 Populus trichocarpa HOM05D007742 ORTHO05D004072 1.7e-10 71.6 119 39.5
Potri.T125604 Populus trichocarpa HOM05D007742 ORTHO05D004072 1.7e-10 71.6 119 39.5
Actinidia19545 Actinidia chinensis HOM05D007742 ORTHO05D004072 2.2e-10 71.2 68 54.4
Migut.A00628 Erythranthe guttata HOM05D007742 ORTHO05D004072 2.2e-10 71.2 496 25.6
Sabra09G0086000 Salix brachista HOM05D007742 ORTHO05D004072 5.0e-10 70.1 122 40.2
Sabra09G0085900 Salix brachista HOM05D007742 ORTHO05D004072 1.1e-09 68.9 118 41.5
Glyma.19G105500 Glycine max HOM05D007742 ORTHO05D004072 2.1e-08 64.7 275 29.1
Sabra09G0086100 Salix brachista HOM05D007742 ORTHO05D004072 2.1e-08 64.7 122 38.5
PGSC0003DMG400020235 Solanum tuberosum HOM05D007742 ORTHO05D004072 2.0e-06 58.2 194 33.5


User provided reference genes

Program Settings