Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 0.0e+00 1592.8 848 100.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 0.0e+00 1261.5 862 79.7
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 0.0e+00 1112.4 773 76.8
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 0.0e+00 1103.2 859 71.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 5.7e-310 1067.4 780 73.6
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.7e-309 1065.8 856 67.4
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 7.0e-308 1060.4 864 67.5
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 2.7e-307 1058.5 835 68.6
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 2.9e-301 1038.5 924 63.9
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.7e-298 1029.2 848 67.3
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.5e-297 1026.2 865 65.4
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 5.6e-297 1024.2 850 66.4
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 1.5e-294 1016.1 774 71.2
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.2e-291 1006.5 850 66.8
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.9e-290 1001.5 853 65.8
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 3.3e-289 998.4 868 64.2
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 9.5e-289 996.9 869 66.7
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.3e-287 992.3 870 64.6
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 4.0e-287 991.5 869 65.0
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 5.2e-287 991.1 800 68.5
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 9.8e-286 986.9 855 64.1
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.3e-285 986.5 891 64.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 8.3e-285 983.8 801 67.8
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 2.7e-283 978.8 870 63.6
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.0e-282 976.9 867 63.8
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.5e-281 973.0 880 63.0
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 3.3e-281 971.8 820 64.3
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.1e-280 969.1 752 69.3
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.1e-280 969.1 858 64.2
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.1e-279 965.3 820 64.1
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 4.1e-276 954.9 854 62.9
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 5.4e-276 954.5 855 62.2
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 7.1e-276 954.1 870 63.9
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 5.6e-273 944.5 801 65.7
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.6e-272 943.0 781 65.8
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.1e-271 940.3 809 64.5
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 1.4e-268 929.9 800 64.9
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 7.1e-268 927.5 854 63.6
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.2e-267 926.8 861 61.6
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.7e-267 925.6 774 66.0
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 7.8e-267 924.1 806 64.3
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 7.3e-265 917.5 861 60.4
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 1.8e-263 912.9 856 60.3
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.4e-262 908.7 850 61.5
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.4e-262 908.7 843 61.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 8.4e-261 904.0 842 61.0
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 4.2e-260 901.7 722 67.7
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.2e-259 900.2 759 66.1
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 7.6e-254 880.9 861 58.8
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 7.6e-254 880.9 875 57.4
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.7e-253 879.8 876 57.6
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.1e-252 877.1 813 62.4
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.4e-252 876.7 862 57.5
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.9e-252 876.3 819 61.1
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.3e-252 874.0 854 61.0
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 7.9e-251 870.9 860 57.9
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 1.1e-249 867.1 810 60.5
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 1.8e-247 859.8 846 58.2
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.4e-247 859.4 776 61.6
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.5e-246 856.7 832 59.6
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 3.4e-246 855.5 815 59.4
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 8.4e-245 850.9 816 58.2
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 8.4e-245 850.9 813 60.6
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.1e-244 850.5 836 58.4
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 5.5e-244 848.2 850 58.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.5e-243 845.5 770 62.2
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 6.0e-243 844.7 816 58.6
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 1.1e-241 840.5 820 58.3
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.9e-241 839.7 756 62.7
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.5e-241 839.3 822 57.8
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.5e-241 839.3 820 58.0
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 4.3e-241 838.6 819 57.1
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 5.7e-241 838.2 822 57.8
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 7.4e-241 837.8 821 57.4
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.3e-240 837.0 828 58.8
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.3e-240 837.0 820 58.7
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 8.2e-240 834.3 915 53.8
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.4e-231 806.2 847 57.0
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 3.8e-229 798.9 695 64.3
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 6.5e-229 798.1 767 59.5
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.1e-228 797.3 857 54.6
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.4e-226 790.4 722 61.1
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 5.1e-218 761.9 856 55.7
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 7.4e-217 758.1 738 56.2
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.7e-208 730.3 490 78.0
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 4.2e-204 715.7 799 52.1
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 3.0e-202 709.5 817 51.8
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 5.4e-199 698.7 796 49.4
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.5e-196 690.6 557 68.2
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.8e-189 666.0 567 65.4
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.0e-182 643.7 587 62.0
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 9.5e-180 634.8 799 48.1
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 5.2e-178 629.0 720 52.5
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.0e-173 614.8 598 59.4
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 8.9e-170 601.7 589 60.1
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 4.6e-166 589.3 497 64.0
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 1.1e-164 584.7 636 54.4
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-160 571.2 633 53.1
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.3e-156 556.6 535 60.0
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 7.3e-156 555.4 535 60.2
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 7.1e-143 512.3 864 42.0
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.8e-112 410.2 789 35.5
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 4.6e-110 403.3 792 37.4
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.5e-108 398.3 282 76.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.5e-87 327.8 299 62.5
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 4.4e-84 317.0 394 45.4
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.8e-77 293.1 270 59.3
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 8.8e-77 292.7 263 62.7
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 7.5e-76 289.7 247 65.6
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 5.6e-71 273.5 205 70.2
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 7.3e-71 273.1 622 31.0
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 3.0e-69 267.7 864 29.9
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 1.6e-49 202.2 868 26.3
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 3.5e-25 121.3 156 48.7
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.6e-22 112.5 145 45.5
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 7.1e-18 97.1 118 50.8
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 2.3e-16 92.0 92 56.5
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 6.2e-14 84.0 68 63.2
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 3.1e-13 81.6 129 41.1
Sc12g0005410 Simmondsia chinensis HOM05D000215 ORTHO05D003454 7.4e-07 60.5 205 26.8
AUR62030985 Chenopodium quinoa HOM05D000215 ORTHO05D003454 2.8e-06 58.5 187 28.3
DCAR_025873 Daucus carota HOM05D001865 ORTHO05D001815 3.7e-06 58.2 196 30.1
AUR62008231 Chenopodium quinoa HOM05D000215 ORTHO05D003454 4.8e-06 57.8 138 30.4
Lsat_1_v5_gn_4_154640 Lactuca sativa HOM05D001865 ORTHO05D001815 6.3e-06 57.4 175 29.1


User provided reference genes

Program Settings