Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.1e-85 320.1 180 100.0
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 3.0e-75 285.4 180 90.0
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 7.2e-69 264.2 183 78.7
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 1.9e-61 239.6 185 72.4
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.1e-53 213.8 185 67.6
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 3.0e-51 205.7 181 59.7
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.7e-50 201.4 184 62.0
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.7e-49 198.7 181 61.9
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 6.3e-49 198.0 184 60.9
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 6.3e-49 198.0 184 61.4
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.4e-48 196.8 182 62.1
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.4e-48 196.8 183 58.5
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 3.5e-47 192.2 181 57.5
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.7e-46 189.9 183 60.7
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 6.5e-46 188.0 181 60.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 8.5e-46 187.6 184 56.5
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 2.5e-45 186.0 182 59.9
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 3.2e-45 185.7 184 58.7
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 3.2e-45 185.7 181 62.4
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.1e-44 183.0 183 61.7
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 2.7e-44 182.6 183 53.0
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 4.7e-44 181.8 182 55.5
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 6.1e-44 181.4 179 60.3
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 8.0e-44 181.0 180 56.1
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 2.3e-43 179.5 182 58.8
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 8.8e-43 177.6 184 56.5
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.5e-42 176.8 183 55.2
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 3.3e-42 175.6 183 56.3
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 7.5e-42 174.5 183 54.1
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 9.7e-42 174.1 182 54.9
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 1.3e-41 173.7 182 54.4
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.3e-41 173.7 183 54.6
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.4e-40 170.2 180 56.1
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.8e-40 169.9 179 57.0
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.8e-40 169.9 179 58.7
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.8e-40 169.9 184 56.0
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.4e-40 169.5 183 51.9
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 3.1e-40 169.1 179 58.1
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 4.1e-40 168.7 183 54.1
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.2e-39 167.2 182 53.8
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 2.0e-39 166.4 180 56.1
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.7e-39 166.0 177 54.8
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 4.5e-39 165.2 192 51.0
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.3e-38 163.7 191 54.5
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 1.7e-38 163.3 182 56.6
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 2.2e-38 162.9 192 53.6
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.9e-38 162.5 180 51.7
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.5e-37 160.2 182 56.0
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.5e-37 160.2 182 51.1
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.5e-37 160.2 127 66.1
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.9e-37 159.8 182 54.4
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 2.5e-37 159.5 112 75.0
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 4.2e-37 158.7 127 64.6
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 4.2e-37 158.7 181 59.7
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 2.7e-36 156.0 122 65.6
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 1.4e-35 153.7 182 50.0
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.8e-35 153.3 182 53.3
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.8e-35 153.3 181 56.9
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 4.4e-34 148.7 196 50.5
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 4.4e-34 148.7 185 51.9
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 7.5e-34 147.9 190 50.5
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 1.1e-32 144.1 181 51.4
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.8e-32 143.3 190 49.5
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 2.0e-31 139.8 127 55.1
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 2.7e-31 139.4 192 49.0
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 4.5e-31 138.7 122 58.2
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 7.7e-31 137.9 134 59.7
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 7.7e-31 137.9 164 53.0
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.0e-30 137.5 124 54.8
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.3e-30 137.1 183 50.3
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.7e-30 136.7 122 60.7
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 2.3e-30 136.3 190 48.9
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.9e-30 136.0 132 55.3
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 2.5e-29 132.9 125 54.4
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 5.5e-29 131.7 131 51.1
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 7.2e-29 131.3 180 45.0
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.2e-28 130.6 133 50.4
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 1.2e-28 130.6 131 51.1
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.2e-28 130.6 133 50.4
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.2e-28 130.6 133 50.4
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 1.2e-28 130.6 131 51.1
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.2e-28 130.6 133 50.4
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.6e-28 130.2 134 51.5
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 3.6e-28 129.0 125 53.6
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 3.6e-28 129.0 134 51.5
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 1.3e-25 120.6 183 51.9
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 6.3e-25 118.2 145 57.2
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 8.3e-25 117.9 190 42.6
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 1.8e-24 116.7 198 48.5
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.1e-24 115.9 194 49.5
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 2.0e-23 113.2 181 46.4
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.0e-23 113.2 141 53.2
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 4.5e-23 112.1 181 49.2
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.8e-22 109.0 193 43.0
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 4.3e-21 105.5 179 49.2
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 4.7e-20 102.1 188 44.1
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 6.1e-20 101.7 195 44.1
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 5.2e-19 98.6 195 44.1
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 5.2e-19 98.6 125 46.4
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.6e-18 96.3 178 38.2
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 9.8e-18 94.4 181 46.4
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 7.0e-16 88.2 120 44.2
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.5e-13 80.5 125 48.0
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 2.1e-12 76.6 148 41.2
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 1.1e-11 74.3 92 48.9
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 4.0e-11 72.4 185 37.3
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 7.0e-08 61.6 90 42.2
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 5.0e-06 55.5 128 33.6


User provided reference genes

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