Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 5.0e-114 414.5 211 100.0
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.5e-53 211.5 217 58.5
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 4.1e-39 165.6 215 47.9
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.3e-37 160.6 184 52.7
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 5.0e-37 158.7 212 49.1
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 3.2e-36 156.0 191 50.8
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.0e-34 149.4 204 46.1
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.2e-29 133.3 230 40.4
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 5.0e-29 132.1 183 43.7
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 9.4e-28 127.9 195 42.1
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 1.4e-26 124.0 128 53.1
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 8.8e-26 121.3 195 39.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 2.8e-24 116.3 190 42.6
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 2.8e-24 116.3 190 42.6
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.8e-24 116.3 202 38.6
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.4e-23 113.2 206 36.9
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.1e-23 112.5 145 44.1
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 5.3e-23 112.1 178 38.8
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.5e-22 109.4 183 41.0
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.3e-21 107.5 182 37.4
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.3e-21 107.5 190 33.7
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.7e-21 107.1 146 41.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 5.0e-21 105.5 200 38.5
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 5.0e-21 105.5 202 35.6
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 8.5e-21 104.8 193 35.8
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.1e-20 104.4 208 39.9
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.1e-20 104.4 196 38.8
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.2e-20 101.7 191 34.0
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 2.1e-19 100.1 208 34.6
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 2.1e-19 100.1 195 34.9
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 2.7e-19 99.8 197 36.5
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 4.7e-19 99.0 203 36.0
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.4e-18 97.4 176 35.8
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.4e-18 97.4 217 33.2
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.8e-18 97.1 188 35.1
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 2.3e-18 96.7 198 34.3
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 6.7e-18 95.1 195 36.4
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 2.0e-17 93.6 191 33.5
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.6e-17 93.2 111 46.8
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.6e-17 93.2 218 33.5
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 3.3e-17 92.8 208 37.5
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.3e-17 92.8 208 37.5
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.7e-17 92.0 191 32.5
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 7.5e-17 91.7 205 37.1
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.5e-17 91.7 208 37.0
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 9.7e-17 91.3 136 41.9
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 9.7e-17 91.3 184 38.0
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.3e-16 90.9 195 34.9
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 1.3e-16 90.9 198 36.9
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 2.2e-16 90.1 178 37.6
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.8e-16 89.0 205 33.7
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 4.8e-16 89.0 147 38.1
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.1e-15 87.8 206 37.9
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.8e-15 87.0 195 38.5
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 2.4e-15 86.7 195 31.8
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.4e-15 86.7 211 32.7
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 2.4e-15 86.7 117 42.7
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 3.1e-15 86.3 119 43.7
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 3.1e-15 86.3 116 38.8
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 5.3e-15 85.5 200 31.0
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.3e-15 85.5 178 37.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 7.0e-15 85.1 203 37.9
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 9.1e-15 84.7 134 41.0
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 9.1e-15 84.7 134 41.8
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.6e-14 84.0 178 35.4
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.6e-14 83.2 107 38.3
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 3.5e-14 82.8 219 31.5
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.0e-13 81.3 150 36.0
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.0e-13 81.3 184 34.2
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.3e-13 80.9 184 33.7
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 2.9e-13 79.7 115 44.3
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 2.9e-13 79.7 117 44.4
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.8e-13 79.3 189 31.2
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.8e-13 79.3 189 30.2
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 6.5e-13 78.6 120 43.3
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 8.5e-13 78.2 188 30.9
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.5e-13 78.2 187 32.6
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 8.5e-13 78.2 190 32.6
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.1e-12 77.8 112 40.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.1e-12 77.8 184 33.2
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.5e-12 77.4 150 36.0
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.9e-12 77.0 190 32.1
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.9e-12 77.0 191 28.3
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.5e-12 76.6 171 35.7
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 4.2e-12 75.9 113 41.6
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 9.4e-12 74.7 111 36.9
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 9.4e-12 74.7 125 34.4
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 2.1e-11 73.6 143 32.2
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 4.7e-11 72.4 197 28.9
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.0e-10 71.2 171 32.2
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.4e-10 70.9 174 32.8
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 2.3e-10 70.1 209 31.6
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 3.0e-10 69.7 121 39.7
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 1.2e-09 67.8 205 25.9
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 1.5e-09 67.4 103 35.9
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 2.0e-09 67.0 71 46.5
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 2.0e-09 67.0 178 34.3
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 5.7e-09 65.5 119 43.7
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 9.8e-09 64.7 179 33.5
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.3e-08 64.3 150 35.3
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-08 63.9 200 29.0
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 4.8e-08 62.4 133 37.6
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 4.8e-08 62.4 201 28.9
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.1e-07 61.2 198 27.3
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.1e-07 59.7 119 39.5
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 2.0e-06 57.0 103 35.9


User provided reference genes

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