Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036549 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 2.1e-54 215.3 101 100.0
PGR083G1620 Punica granatum HOM05D002553 ORTHO05D002767 4.7e-17 91.3 79 54.4
Dinv22901 Davidia involucrata HOM05D002553 ORTHO05D002767 7.9e-17 90.5 79 55.7
Dinv23976 Davidia involucrata HOM05D002553 ORTHO05D002767 7.9e-17 90.5 79 55.7
CiPaw.07G014800 Carya illinoinensis HOM05D002553 ORTHO05D002767 1.8e-16 89.4 79 55.7
Glyma.19G237000 Glycine max HOM05D002553 ORTHO05D002767 2.3e-16 89.0 78 52.6
CANSAT54G1986 Cannabis sativa HOM05D002553 ORTHO05D002767 3.0e-16 88.6 83 53.0
VMungo0540G1597 Vigna mungo HOM05D002553 ORTHO05D002767 3.0e-16 88.6 78 51.3
MD12G1223700 Malus domestica HOM05D002553 ORTHO05D002767 6.7e-16 87.4 78 51.3
TPR.G3095 Trifolium pratense HOM05D002553 ORTHO05D002767 6.7e-16 87.4 78 53.8
Lalb_Chr18g0045531 Lupinus albus HOM05D002553 ORTHO05D002767 8.8e-16 87.0 78 51.3
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 8.8e-16 87.0 84 48.8
HanXRQChr02g0037091 Helianthus annuus HOM05D002553 ORTHO05D002767 1.1e-15 86.7 78 55.1
MD04G1209000 Malus domestica HOM05D002553 ORTHO05D002767 1.1e-15 86.7 79 50.6
QL03p004498 Quercus lobata HOM05D002553 ORTHO05D002767 1.1e-15 86.7 78 52.6
TAR362G0623 Trochodendron aralioides HOM05D002553 ORTHO05D002767 1.1e-15 86.7 78 55.1
arahy.Tifrunner.gnm1.ann1.7PL8A0 Arachis hypogaea HOM05D002553 ORTHO05D002767 1.5e-15 86.3 78 50.0
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 1.5e-15 86.3 78 51.3
Haze_04233 Corylus avellana HOM05D002553 ORTHO05D002767 1.5e-15 86.3 78 52.6
Glyma.03G240100 Glycine max HOM05D002553 ORTHO05D002767 2.0e-15 85.9 78 51.3
Lj5g0009152 Lotus japonicus HOM05D002553 ORTHO05D002767 2.0e-15 85.9 78 52.6
SGA_v2.0_scaffold43G16279 Striga asiatica HOM05D002553 ORTHO05D002767 2.0e-15 85.9 84 52.4
Eucgr.B02001 Eucalyptus grandis HOM05D002553 ORTHO05D002767 3.3e-15 85.1 79 50.6
Psat6g149240 Pisum sativum HOM05D002553 ORTHO05D002767 3.3e-15 85.1 78 48.7
AUR62005107 Chenopodium quinoa HOM05D002553 ORTHO05D002767 4.4e-15 84.7 78 50.0
Phvul.006G093911 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 4.4e-15 84.7 78 50.0
Atru.chr2.475 Acer truncatum HOM05D002553 ORTHO05D002767 5.7e-15 84.3 79 51.9
Solyc01g098700.4 Solanum lycopersicum HOM05D002553 ORTHO05D002767 5.7e-15 84.3 78 52.6
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 7.4e-15 84.0 78 50.0
Hma1.2p1_0666F.1_g199470 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 7.4e-15 84.0 79 50.6
Lsat_1_v5_gn_1_25020 Lactuca sativa HOM05D002553 ORTHO05D002767 9.7e-15 83.6 82 52.4
Ah.06g190110 Amaranthus hybridus HOM05D002553 ORTHO05D002767 1.3e-14 83.2 78 50.0
arahy.Tifrunner.gnm1.ann1.0VD1AP Arachis hypogaea HOM05D002553 ORTHO05D002767 1.3e-14 83.2 83 47.0
CAN.G1134.23 Capsicum annuum HOM05D002553 ORTHO05D002767 1.3e-14 83.2 78 51.3
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 1.3e-14 83.2 79 53.2
COL.COLO4_13515 Corchorus olitorius HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 51.3
Nn4g26152 Nelumbo nucifera HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 53.8
RcHm_v2.0_Chr3g0454121 Rosa chinensis HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 52.6
Sc09g0003340 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 48.7
Sopen01g042240 Solanum pennellii HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 51.3
PGSC0003DMG401028577 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 51.3
TWI12G0069 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 1.7e-14 82.8 78 51.3
Lj9C682T7 Lonicera japonica HOM05D002553 ORTHO05D002767 2.2e-14 82.4 79 51.9
Medtr1g083370 Medicago truncatula HOM05D002553 ORTHO05D002767 2.2e-14 82.4 83 48.2
vmacro19641 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 2.2e-14 82.4 79 50.6
Zm00001eb017520 Zea mays HOM05D002553 ORTHO05D002767 2.2e-14 82.4 78 50.0
AUR62000869 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.8e-14 82.0 75 50.7
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 2.8e-14 82.0 78 50.0
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 3.7e-14 81.6 84 47.6
PSO210G1325 Papaver somniferum HOM05D002553 ORTHO05D002767 3.7e-14 81.6 78 51.3
Sabra05G0037500 Salix brachista HOM05D002553 ORTHO05D002767 3.7e-14 81.6 83 48.2
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 4.8e-14 81.3 78 51.3
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 4.8e-14 81.3 78 47.4
Medtr1g082470 Medicago truncatula HOM05D002553 ORTHO05D002767 4.8e-14 81.3 76 48.7
HPP92_001339 Vanilla planifolia HOM05D002553 ORTHO05D002767 4.8e-14 81.3 79 48.1
ECA247G0575 Erigeron canadensis HOM05D002553 ORTHO05D002767 6.3e-14 80.9 77 50.6
DCAR_003314 Daucus carota HOM05D002553 ORTHO05D002767 8.2e-14 80.5 79 49.4
Glyma.10G156850 Glycine max HOM05D002553 ORTHO05D002767 8.2e-14 80.5 78 48.7
Peaxi162Scf00434g00216 Petunia axillaris HOM05D002553 ORTHO05D002767 8.2e-14 80.5 78 50.0
Potri.005G039100 Populus trichocarpa HOM05D002553 ORTHO05D002767 8.2e-14 80.5 83 47.0
TPR.G3038 Trifolium pratense HOM05D002553 ORTHO05D002767 8.2e-14 80.5 78 50.0
Aqoxy5G00545 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.1e-13 80.1 78 50.0
Prupe.6G330000 Prunus persica HOM05D002553 ORTHO05D002767 1.1e-13 80.1 78 48.7
FvH4_6g05350 Fragaria vesca HOM05D002553 ORTHO05D002767 1.4e-13 79.7 78 48.7
FAN14G5684 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.4e-13 79.7 78 48.7
Hund07047 Selenicereus undatus HOM05D002553 ORTHO05D002767 1.4e-13 79.7 78 47.4
MELO3C004297.2 Cucumis melo HOM05D002553 ORTHO05D002767 1.8e-13 79.3 78 47.4
FAN09G0499 Fragaria x ananassa HOM05D002553 ORTHO05D002767 3.1e-13 78.6 80 46.2
TAR636G3242 Trochodendron aralioides HOM05D002553 ORTHO05D002767 3.1e-13 78.6 80 51.2
Cpa.g.sc48.14 Carica papaya HOM05D002553 ORTHO05D002767 5.3e-13 77.8 79 46.8
CsaV3_2G004990 Cucumis sativus L. HOM05D002553 ORTHO05D002767 5.3e-13 77.8 78 46.2
Thecc.05G308000 Theobroma cacao HOM05D002553 ORTHO05D002767 5.3e-13 77.8 78 48.7
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 7.0e-13 77.4 84 44.0
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 7.0e-13 77.4 79 48.1
TPR.G2739 Trifolium pratense HOM05D002553 ORTHO05D002767 7.0e-13 77.4 78 46.2
TAR636G3134 Trochodendron aralioides HOM05D002553 ORTHO05D002767 7.0e-13 77.4 79 50.6
Migut.B01190 Erythranthe guttata HOM05D002553 ORTHO05D002767 9.1e-13 77.0 79 48.1
ATR0626G263 Amborella trichopoda HOM05D002553 ORTHO05D002767 1.2e-12 76.6 78 47.4
Gohir.A13G107100 Gossypium hirsutum HOM05D002553 ORTHO05D002767 1.2e-12 76.6 76 48.7
THA.LOC104802808 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 1.6e-12 76.3 78 44.9
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 2.0e-12 75.9 78 46.2
SalBow5G4087 Salvia bowleyana HOM05D002553 ORTHO05D002767 3.5e-12 75.1 79 45.6
AL6G39600 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 4.5e-12 74.7 78 44.9
CARHR079530 Cardamine hirsuta HOM05D002553 ORTHO05D002767 4.5e-12 74.7 78 44.9
Thhalv10020427m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 4.5e-12 74.7 78 44.9
Gohir.D13G110400 Gossypium hirsutum HOM05D002553 ORTHO05D002767 4.5e-12 74.7 76 47.4
Gorai.013G123700 Gossypium raimondii HOM05D002553 ORTHO05D002767 4.5e-12 74.7 76 47.4
Sp3g04040 Schrenkiella parvula HOM05D002553 ORTHO05D002767 4.5e-12 74.7 78 44.9
AL3G15610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 5.9e-12 74.3 78 44.9
AT3G05190 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 5.9e-12 74.3 78 44.9
BcaC04g23681 Brassica carinata HOM05D002553 ORTHO05D002767 5.9e-12 74.3 85 41.2
A09p05260 Brassica napus HOM05D002553 ORTHO05D002767 5.9e-12 74.3 85 42.4
BNapus_Darmor_BZH_scaffold_114p00250 Brassica napus HOM05D002553 ORTHO05D002767 5.9e-12 74.3 78 44.9
BcaB04g21368 Brassica carinata HOM05D002553 ORTHO05D002767 7.7e-12 73.9 78 44.9
BolC1t05708H Brassica oleracea HOM05D002553 ORTHO05D002767 7.7e-12 73.9 78 44.9
BraSC132t45517Z Brassica rapa HOM05D002553 ORTHO05D002767 1.0e-11 73.6 76 46.1
Ca_10093_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 1.3e-11 73.2 78 44.9
MSTRG.16977 Avicennia marina HOM05D002553 ORTHO05D002767 1.7e-11 72.8 79 45.6
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 1.7e-11 72.8 78 46.2
MSTRG.5079 Avicennia marina HOM05D002553 ORTHO05D002767 2.2e-11 72.4 79 44.3
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 2.2e-11 72.4 78 44.9
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 2.2e-11 72.4 78 44.9
CARHR186010 Cardamine hirsuta HOM05D002553 ORTHO05D002767 2.2e-11 72.4 77 45.5
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 2.9e-11 72.0 79 45.6
BcaNung04368 Brassica carinata HOM05D002553 ORTHO05D002767 3.8e-11 71.6 78 44.9
Aa31LG5G15560 Aethionema arabicum HOM05D002553 ORTHO05D002767 5.0e-11 71.2 78 43.6
Carub.0006s2513 Capsella rubella HOM05D002553 ORTHO05D002767 6.5e-11 70.9 78 43.6
Carub.0003s0444 Capsella rubella HOM05D002553 ORTHO05D002767 1.1e-10 70.1 78 43.6
Cc02_g32710 Coffea canephora HOM05D002553 ORTHO05D002767 1.9e-10 69.3 84 44.0
BcaNung02463 Brassica carinata HOM05D002553 ORTHO05D002767 2.5e-10 68.9 78 43.6
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 5.5e-10 67.8 78 42.3
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 5.5e-10 67.8 78 42.3
Oeu012095.1 Olea europaea HOM05D002553 ORTHO05D002767 8.0e-09 63.9 34 73.5
AagrBONN_evm.TU.Sc2ySwM_344.2814 Anthoceros agrestis HOM05D002553 ORTHO05D002767 1.0e-08 63.5 85 40.0
BraA09t36165Z Brassica rapa HOM05D002553 ORTHO05D002767 1.4e-08 63.2 87 36.8
Pp3c16_17790 Physcomitrium patens HOM05D002553 ORTHO05D002767 5.2e-08 61.2 71 40.8
Pp3c6_5420 Physcomitrium patens HOM05D002553 ORTHO05D002767 5.2e-08 61.2 71 40.8
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.8e-08 60.5 64 45.3
Oeu004302.1 Olea europaea HOM05D002553 ORTHO05D002767 1.1e-07 60.1 33 66.7
Mapoly0006s0260 Marchantia polymorpha HOM05D002553 ORTHO05D002767 3.3e-07 58.5 71 40.8
C09p05740 Brassica napus HOM05D002553 ORTHO05D002767 3.7e-06 55.1 40 50.0
BolC9t53501H Brassica oleracea HOM05D002553 ORTHO05D002767 3.7e-06 55.1 40 50.0
SMO356G0084 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 6.3e-06 54.3 78 37.2


User provided reference genes

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