Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036543 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 1.1e-21 105.9 60 100.0
CSS0022323 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 9.5e-18 92.8 60 85.0
Thecc.01G412500 Theobroma cacao HOM05D005524 ORTHO05D005392 9.2e-13 76.3 60 66.7
CSS0011241 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 6.0e-12 73.6 60 66.7
CSS0022867 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 6.0e-12 73.6 60 66.7
CSS0036301 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 6.0e-12 73.6 60 66.7
Phvul.001G137100 Phaseolus vulgaris HOM05D005524 ORTHO05D005392 7.8e-12 73.2 57 68.4
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.3e-11 71.6 62 62.9
Potri.016G052001 Populus trichocarpa HOM05D005524 ORTHO05D005392 6.6e-11 70.1 62 64.5
Potri.009G063600 Populus trichocarpa HOM05D005524 ORTHO05D005392 1.9e-10 68.6 61 63.9
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 9.5e-10 66.2 61 60.7
Rhsim03G0011800 Rhododendron simsii HOM05D005524 ORTHO05D005392 1.6e-09 65.5 60 60.0
Sabra16G0164700 Salix brachista HOM05D005524 ORTHO05D005392 2.8e-09 64.7 61 60.7
Eucgr.H02490 Eucalyptus grandis HOM05D005524 ORTHO05D005392 4.7e-09 63.9 60 60.0
Dinv18091 Davidia involucrata HOM05D005524 ORTHO05D005392 8.1e-09 63.2 62 59.7
Duzib106G1083 Durio zibethinus HOM05D005524 ORTHO05D005392 1.1e-08 62.8 63 57.1
Eucgr.A02403 Eucalyptus grandis HOM05D005524 ORTHO05D005392 1.1e-08 62.8 62 61.3
Hma1.2p1_0293F.1_g116270 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 1.1e-08 62.8 64 60.9
Manes.07G004601 Manihot esculenta HOM05D005524 ORTHO05D005392 1.1e-08 62.8 63 57.1
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 1.4e-08 62.4 62 59.7
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 2.3e-08 61.6 62 58.1
Hma1.2p1_0621F.1_g190610 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 3.1e-08 61.2 60 58.3
CSS0022662 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 4.0e-08 60.8 60 56.7
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 5.2e-08 60.5 62 56.5
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 5.2e-08 60.5 62 56.5
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 5.2e-08 60.5 62 56.5
Duzib128G1940 Durio zibethinus HOM05D005524 ORTHO05D005392 5.2e-08 60.5 65 56.9
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 6.8e-08 60.1 62 56.5
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 6.8e-08 60.1 62 58.1
Duzib093G2098 Durio zibethinus HOM05D005524 ORTHO05D005392 6.8e-08 60.1 63 55.6
Atru.chr1.974 Acer truncatum HOM05D005524 ORTHO05D005392 8.9e-08 59.7 67 61.2
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 56.5
Ca_05436_v3 Cicer arietinum L. HOM05D005524 ORTHO05D005392 1.2e-07 59.3 58 53.4
SHI24452 Sapria himalayana HOM05D005524 ORTHO05D005392 1.2e-07 59.3 57 61.4
Sp4g24180 Schrenkiella parvula HOM05D005524 ORTHO05D005392 1.2e-07 59.3 62 61.3
AT2G41905 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 1.5e-07 58.9 62 59.7
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 1.5e-07 58.9 62 54.8
CARHR137000 Cardamine hirsuta HOM05D005524 ORTHO05D005392 1.5e-07 58.9 62 58.1
BcaC02g07275 Brassica carinata HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
A04p31910 Brassica napus HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
C04p69380 Brassica napus HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
BolC4t28440H Brassica oleracea HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
BraA04t18649Z Brassica rapa HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
Carub.0004s2422 Capsella rubella HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
ClCG10G012450 Citrullus lanatus HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 59.7
Atru.chr1.1006 Acer truncatum HOM05D005524 ORTHO05D005392 2.6e-07 58.2 67 59.7
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 2.6e-07 58.2 62 56.5
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 2.6e-07 58.2 62 56.5
Glyma.02G180200 Glycine max HOM05D005524 ORTHO05D005392 2.6e-07 58.2 57 57.9
Aa31LG10G12450 Aethionema arabicum HOM05D005524 ORTHO05D005392 3.4e-07 57.8 61 55.7
AL4G40250 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 3.4e-07 57.8 62 58.1
CSS0030443 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 3.4e-07 57.8 60 53.3
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 4.4e-07 57.4 63 57.1
BcaB06g29217 Brassica carinata HOM05D005524 ORTHO05D005392 4.4e-07 57.4 62 58.1
TWI73G1008 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 4.4e-07 57.4 61 57.4
BcaNung07196 Brassica carinata HOM05D005524 ORTHO05D005392 5.8e-07 57.0 62 58.1
BcaB01g03426 Brassica carinata HOM05D005524 ORTHO05D005392 7.6e-07 56.6 62 56.5
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 7.6e-07 56.6 62 56.5
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 7.6e-07 56.6 63 57.1
TWI09G0988 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 7.6e-07 56.6 61 57.4
Lalb_Chr01g0017541 Lupinus albus HOM05D005524 ORTHO05D005392 1.3e-06 55.8 59 57.6
COL.COLO4_23921 Corchorus olitorius HOM05D005524 ORTHO05D005392 2.2e-06 55.1 54 57.4
A03p23470 Brassica napus HOM05D005524 ORTHO05D005392 2.9e-06 54.7 62 56.5
BraA03t11563Z Brassica rapa HOM05D005524 ORTHO05D005392 2.9e-06 54.7 62 56.5
Lj1g0001667 Lotus japonicus HOM05D005524 ORTHO05D005392 3.7e-06 54.3 57 56.1
Sed0016248 Sechium edule HOM05D005524 ORTHO05D005392 3.7e-06 54.3 64 56.2
Thecc.05G164300 Theobroma cacao HOM05D005524 ORTHO05D005392 3.7e-06 54.3 59 55.9
CsaV3_3G032220 Cucumis sativus L. HOM05D005524 ORTHO05D005392 4.9e-06 53.9 59 59.3
BcaC01g05321 Brassica carinata HOM05D005524 ORTHO05D005392 6.4e-06 53.5 62 54.8
C03p27990 Brassica napus HOM05D005524 ORTHO05D005392 6.4e-06 53.5 62 54.8
BolC3t15170H Brassica oleracea HOM05D005524 ORTHO05D005392 6.4e-06 53.5 62 54.8
CiPaw.13G003600 Carya illinoinensis HOM05D005524 ORTHO05D005392 8.4e-06 53.1 65 55.4
Lalb_Chr12g0205751 Lupinus albus HOM05D005524 ORTHO05D005392 8.4e-06 53.1 62 56.5


User provided reference genes

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