Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036496 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D011734 2.3e-27 124.8 60 100.0
CSS0013088 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001212 2.1e-09 65.1 33 93.9
Sabra01G0150200 Salix brachista HOM05D000152 ORTHO05D001212 1.8e-08 62.0 33 87.9
Nn8g39002 Nelumbo nucifera HOM05D000152 ORTHO05D001212 2.3e-08 61.6 33 84.8
MD17G1180300 Malus domestica HOM05D000152 ORTHO05D001212 3.1e-08 61.2 33 84.8
Prupe.3G056200 Prunus persica HOM05D000152 ORTHO05D001212 3.1e-08 61.2 33 84.8
Dinv37960 Davidia involucrata HOM05D000152 ORTHO05D001212 4.0e-08 60.8 33 84.8
PSO210G4676 Papaver somniferum HOM05D000152 ORTHO05D001212 4.0e-08 60.8 33 84.8
PSO210G6308 Papaver somniferum HOM05D000152 ORTHO05D001212 4.0e-08 60.8 33 84.8
GSVIVG01016949001 Vitis vinifera HOM05D000152 ORTHO05D001212 5.2e-08 60.5 33 84.8
Gohir.A10G064400 Gossypium hirsutum HOM05D000152 ORTHO05D001212 6.8e-08 60.1 33 84.8
MD09G1199700 Malus domestica HOM05D000152 ORTHO05D001212 6.8e-08 60.1 33 84.8
Medtr2g100620 Medicago truncatula HOM05D000152 ORTHO05D001212 6.8e-08 60.1 33 81.8
Ah.01g017230 Amaranthus hybridus HOM05D000152 ORTHO05D001212 8.9e-08 59.7 33 81.8
CSS0005730 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001212 8.9e-08 59.7 33 81.8
CSS0035100 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001212 8.9e-08 59.7 33 81.8
Lj3g0015072 Lotus japonicus HOM05D000152 ORTHO05D001212 8.9e-08 59.7 33 81.8
Cc04_g02390 Coffea canephora HOM05D000152 ORTHO05D001212 1.2e-07 59.3 48 62.5
Hma1.2p1_0430F.1_g151200 Hydrangea macrophylla HOM05D000152 ORTHO05D001212 1.2e-07 59.3 33 81.8
Lj9C515T3 Lonicera japonica HOM05D000152 ORTHO05D011734 1.2e-07 59.3 33 81.8
Cc04_g02380 Coffea canephora HOM05D000152 ORTHO05D001212 1.5e-07 58.9 33 81.8
Glyma.07G014100 Glycine max HOM05D000152 ORTHO05D001212 1.5e-07 58.9 31 83.9
Glyma.08G199500 Glycine max HOM05D000152 ORTHO05D001212 1.5e-07 58.9 31 83.9
Nitab4.5_0003489g0010 Nicotiana tabacum HOM05D000152 ORTHO05D001212 1.5e-07 58.9 33 78.8
Peaxi162Scf00038g01135 Petunia axillaris HOM05D000152 ORTHO05D001212 1.5e-07 58.9 33 78.8
Solyc03g121180.4 Solanum lycopersicum HOM05D000152 ORTHO05D001212 1.5e-07 58.9 33 78.8
Sopen03g039990 Solanum pennellii HOM05D000152 ORTHO05D001212 1.5e-07 58.9 33 78.8
PGSC0003DMG400002519 Solanum tuberosum HOM05D000152 ORTHO05D001212 1.5e-07 58.9 33 78.8
Aqoxy7G03952 Aquilegia oxysepala HOM05D000152 ORTHO05D001212 2.0e-07 58.5 33 75.8
CiPaw.01G229700 Carya illinoinensis HOM05D000152 ORTHO05D001212 2.0e-07 58.5 33 78.8
HanXRQChr09g0276071 Helianthus annuus HOM05D000152 ORTHO05D001212 2.0e-07 58.5 33 81.8
Phvul.010G143600 Phaseolus vulgaris HOM05D000152 ORTHO05D001212 2.0e-07 58.5 31 83.9
Actinidia09012 Actinidia chinensis HOM05D000152 ORTHO05D001212 2.6e-07 58.2 33 78.8
Actinidia21727 Actinidia chinensis HOM05D000152 ORTHO05D001212 2.6e-07 58.2 33 78.8
Actinidia32116 Actinidia chinensis HOM05D000152 ORTHO05D001212 2.6e-07 58.2 33 78.8
Cfa003627 Carpinus fangiana HOM05D000152 ORTHO05D001212 2.6e-07 58.2 31 83.9
Ca_01175_v3 Cicer arietinum L. HOM05D000152 ORTHO05D001212 2.6e-07 58.2 33 81.8
Duzib235G0697 Durio zibethinus HOM05D000152 ORTHO05D001212 2.6e-07 58.2 31 83.9
Gohir.D05G134600 Gossypium hirsutum HOM05D000152 ORTHO05D001212 2.6e-07 58.2 31 83.9
Lj5C51T8 Lonicera japonica HOM05D000152 ORTHO05D001212 2.6e-07 58.2 33 78.8
Phvul.005G164800 Phaseolus vulgaris HOM05D000152 ORTHO05D001212 2.6e-07 58.2 31 83.9
Psat5g295040 Pisum sativum HOM05D000152 ORTHO05D001212 2.6e-07 58.2 33 81.8
VMungo1080G0871 Vigna mungo HOM05D000152 ORTHO05D001212 2.6e-07 58.2 31 83.9
arahy.Tifrunner.gnm1.ann1.8LN5UZ Arachis hypogaea HOM05D000152 ORTHO05D001212 3.4e-07 57.8 33 78.8
arahy.Tifrunner.gnm1.ann1.S7XZ9Q Arachis hypogaea HOM05D000152 ORTHO05D001212 3.4e-07 57.8 33 78.8
CAN.G1143.29 Capsicum annuum HOM05D000152 ORTHO05D001212 3.4e-07 57.8 33 75.8
Lalb_Chr25g0280461 Lupinus albus HOM05D000152 ORTHO05D001212 3.4e-07 57.8 33 78.8
Nitab4.5_0005085g0010 Nicotiana tabacum HOM05D000152 ORTHO05D001212 3.4e-07 57.8 33 75.8
Ah.01g005930 Amaranthus hybridus HOM05D000152 ORTHO05D001212 4.4e-07 57.4 33 78.8
arahy.Tifrunner.gnm1.ann1.CDL3P0 Arachis hypogaea HOM05D000152 ORTHO05D001212 4.4e-07 57.4 33 78.8
arahy.Tifrunner.gnm1.ann1.D0T0UQ Arachis hypogaea HOM05D000152 ORTHO05D001212 4.4e-07 57.4 33 78.8
VMungo0331G1044 Vigna mungo HOM05D000152 ORTHO05D001212 4.4e-07 57.4 31 80.6
ATR0026G049 Amborella trichopoda HOM05D000152 ORTHO05D001212 5.8e-07 57.0 31 80.6
COL.COLO4_30538 Corchorus olitorius HOM05D000152 ORTHO05D001212 5.8e-07 57.0 31 80.6
DCAR_007594 Daucus carota HOM05D000152 ORTHO05D001212 5.8e-07 57.0 33 72.7
Duzib192G0774 Durio zibethinus HOM05D000152 ORTHO05D001212 5.8e-07 57.0 31 80.6
FAN02G4540 Fragaria x ananassa HOM05D000152 ORTHO05D001212 5.8e-07 57.0 31 80.6
Glyma.13G353100 Glycine max HOM05D000152 ORTHO05D001212 5.8e-07 57.0 31 80.6
Rhsim12G0203800 Rhododendron simsii HOM05D000152 ORTHO05D001212 5.8e-07 57.0 33 75.8
SGA_v2.0_scaffold265G46054 Striga asiatica HOM05D000152 ORTHO05D001212 5.8e-07 57.0 33 75.8
Atru.chr1.3564 Acer truncatum HOM05D000152 ORTHO05D001212 7.6e-07 56.6 31 77.4
Ca_23281_v3 Cicer arietinum L. HOM05D000152 ORTHO05D001212 7.6e-07 56.6 33 75.8
Haze_15876 Corylus avellana HOM05D000152 ORTHO05D001212 7.6e-07 56.6 31 80.6
QL02p056197 Quercus lobata HOM05D000152 ORTHO05D001212 7.6e-07 56.6 31 80.6
QL05p018762 Quercus lobata HOM05D000152 ORTHO05D001212 7.6e-07 56.6 31 80.6
TWI79G1434 Tripterygium wilfordii HOM05D000152 ORTHO05D001212 7.6e-07 56.6 33 75.8
Dinv37961 Davidia involucrata HOM05D000152 ORTHO05D001212 9.9e-07 56.2 32 71.9
THA.LOC104817958 Tarenaya hassleriana HOM05D000152 ORTHO05D001212 9.9e-07 56.2 33 75.8
AUR62022244 Chenopodium quinoa HOM05D000152 ORTHO05D001212 1.3e-06 55.8 33 75.8
AUR62031957 Chenopodium quinoa HOM05D000152 ORTHO05D001212 1.3e-06 55.8 33 75.8
ClCG07G013430 Citrullus lanatus HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
ClCG07G013470 Citrullus lanatus HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
CsaV3_3G023420 Cucumis sativus L. HOM05D001428 ORTHO05D001306 1.3e-06 55.8 31 77.4
Eucgr.F03090 Eucalyptus grandis HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
FvH4_6g32640 Fragaria vesca HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
FAN05G0699 Fragaria x ananassa HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
FAN05G1632 Fragaria x ananassa HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
FAN14G4153 Fragaria x ananassa HOM05D000152 ORTHO05D001212 1.3e-06 55.8 31 77.4
Hund07631 Selenicereus undatus HOM05D000152 ORTHO05D001212 1.3e-06 55.8 33 75.8
THA.LOC104810621 Tarenaya hassleriana HOM05D000152 ORTHO05D001212 1.3e-06 55.8 33 78.8
MSTRG.22620 Avicennia marina HOM05D000152 ORTHO05D001212 1.7e-06 55.5 33 75.8
EL10Ac9g21177 Beta vulgaris HOM05D000152 ORTHO05D001212 1.7e-06 55.5 33 75.8
Ca_01176_v3 Cicer arietinum L. HOM05D000152 ORTHO05D001212 1.7e-06 55.5 33 75.8
Migut.I00965 Erythranthe guttata HOM05D000152 ORTHO05D001212 1.7e-06 55.5 33 72.7
Gohir.A05G132650 Gossypium hirsutum HOM05D000152 ORTHO05D001212 1.7e-06 55.5 31 80.6
Manes.04G135900 Manihot esculenta HOM05D000152 ORTHO05D001212 1.7e-06 55.5 31 77.4
Potri.001G191600 Populus trichocarpa HOM05D000152 ORTHO05D001212 1.7e-06 55.5 33 69.7
Sp3g14750 Schrenkiella parvula HOM05D000152 ORTHO05D001212 1.7e-06 55.5 33 75.8
TPR.G15147 Trifolium pratense HOM05D000152 ORTHO05D001212 1.7e-06 55.5 31 74.2
BcaB06g25730 Brassica carinata HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 75.8
BcaC05g28886 Brassica carinata HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 75.8
C05p50080 Brassica napus HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 75.8
BolC5t33761H Brassica oleracea HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 75.8
ECA232G2230 Erigeron canadensis HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 72.7
Gohir.A10G064500 Gossypium hirsutum HOM05D000152 ORTHO05D001212 2.2e-06 55.1 31 77.4
Gohir.D10G066000 Gossypium hirsutum HOM05D000152 ORTHO05D001212 2.2e-06 55.1 31 77.4
Gorai.011G070000 Gossypium raimondii HOM05D000152 ORTHO05D001212 2.2e-06 55.1 31 77.4
Psat4g196720 Pisum sativum HOM05D000152 ORTHO05D001212 2.2e-06 55.1 31 74.2
RcHm_v2.0_Chr2g0141171 Rosa chinensis HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 72.7
SalBow2G1537 Salvia bowleyana HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 72.7
TAR624G1032 Trochodendron aralioides HOM05D000152 ORTHO05D001212 2.2e-06 55.1 33 69.7
Carub.0003s1612 Capsella rubella HOM05D000152 ORTHO05D001212 2.9e-06 54.7 33 72.7
CARHR091580 Cardamine hirsuta HOM05D000152 ORTHO05D001212 2.9e-06 54.7 33 66.7
MELO3C013013.2 Cucumis melo HOM05D000152 ORTHO05D001212 2.9e-06 54.7 31 74.2
Lalb_Chr22g0351631 Lupinus albus HOM05D000152 ORTHO05D001212 2.9e-06 54.7 31 77.4
Manes.11G031200 Manihot esculenta HOM05D000152 ORTHO05D001212 2.9e-06 54.7 31 74.2
RcHm_v2.0_Chr2g0141141 Rosa chinensis HOM05D000152 ORTHO05D001212 2.9e-06 54.7 33 72.7
Sed0000057 Sechium edule HOM05D001428 ORTHO05D001212 2.9e-06 54.7 31 74.2
Sc12g0010090 Simmondsia chinensis HOM05D000152 ORTHO05D001212 2.9e-06 54.7 31 71.0
TWI79G0667 Tripterygium wilfordii HOM05D000152 ORTHO05D001212 2.9e-06 54.7 33 72.7
AL3G29150 Arabidopsis lyrata HOM05D000152 ORTHO05D001212 3.7e-06 54.3 33 72.7
AT3G16370 Arabidopsis thaliana HOM05D000152 ORTHO05D001212 3.7e-06 54.3 33 72.7
CAN.G1143.28 Capsicum annuum HOM05D000152 ORTHO05D001212 3.7e-06 54.3 33 72.7
CiPaw.02G144600 Carya illinoinensis HOM05D000152 ORTHO05D001212 3.7e-06 54.3 31 71.0
Thhalv10021008m.g Eutrema salsugineum HOM05D000152 ORTHO05D001212 3.7e-06 54.3 33 72.7
Thecc.06G102500 Theobroma cacao HOM05D000152 ORTHO05D001212 3.7e-06 54.3 31 74.2
vmacro18838 Vaccinium macrocarpon HOM05D000152 ORTHO05D001212 3.7e-06 54.3 33 69.7
MSTRG.11015 Avicennia marina HOM05D000152 ORTHO05D001212 4.9e-06 53.9 33 69.7
A05p33140 Brassica napus HOM05D000152 ORTHO05D001212 4.9e-06 53.9 33 72.7
BraA05t22138Z Brassica rapa HOM05D000152 ORTHO05D001212 4.9e-06 53.9 33 72.7
Cpa.g.sc25.31 Carica papaya HOM05D000152 ORTHO05D001212 4.9e-06 53.9 31 71.0
ClCG09G000290 Citrullus lanatus HOM05D000152 ORTHO05D001212 4.9e-06 53.9 31 71.0
MELO3C024430.2 Cucumis melo HOM05D000106 ORTHO05D000160 4.9e-06 53.9 31 71.0
Hma1.2p1_0679F.1_g202190 Hydrangea macrophylla HOM05D000152 ORTHO05D001212 4.9e-06 53.9 33 69.7
Hma1.2p1_1621F.1_g294045 Hydrangea macrophylla HOM05D000152 ORTHO05D001212 4.9e-06 53.9 33 69.7
TPR.G6506 Trifolium pratense HOM05D000152 ORTHO05D023777 4.9e-06 53.9 33 75.8
Aa31LG8G3510 Aethionema arabicum HOM05D000152 ORTHO05D001212 6.4e-06 53.5 33 69.7
SEGI_09200 Sequoiadendron giganteum HOM05D000152 ORTHO05D001212 6.4e-06 53.5 31 74.2
CARHR091590 Cardamine hirsuta HOM05D000152 ORTHO05D001212 8.4e-06 53.1 33 69.7
Ciclev10025938m.g Citrus clementina HOM05D000152 ORTHO05D001212 8.4e-06 53.1 31 71.0
Lalb_Chr01g0013221 Lupinus albus HOM05D000152 ORTHO05D001212 8.4e-06 53.1 33 69.7


User provided reference genes

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