Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036466 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 3.2e-50 201.4 100 100.0
Dinv34475 Davidia involucrata HOM05D003873 ORTHO05D004127 3.0e-16 88.6 60 78.3
CSS0018140 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 1.1e-13 80.1 60 75.0
Cc02_g05430 Coffea canephora HOM05D003873 ORTHO05D004127 2.0e-12 75.9 60 66.7
Hma1.2p1_0292F.1_g115910 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 3.4e-12 75.1 56 69.6
TAR369G0800 Trochodendron aralioides HOM05D003873 ORTHO05D004127 2.9e-11 72.0 63 68.3
vmacro09968 Vaccinium macrocarpon HOM05D003873 ORTHO05D004127 1.9e-10 69.3 60 65.0
Oeu027748.1 Olea europaea HOM05D003873 ORTHO05D004127 1.6e-09 66.2 56 66.1
Lj8A55T86 Lonicera japonica HOM05D003873 ORTHO05D004127 4.6e-09 64.7 65 58.5
Nn2g10324 Nelumbo nucifera HOM05D003873 ORTHO05D004127 4.6e-09 64.7 58 62.1
Oeu004079.1 Olea europaea HOM05D003873 ORTHO05D004127 4.6e-09 64.7 60 63.3
MD01G1164200 Malus domestica HOM05D003873 ORTHO05D004127 6.0e-09 64.3 44 70.5
Rhsim09G0185200 Rhododendron simsii HOM05D003873 ORTHO05D004127 6.0e-09 64.3 54 64.8
Actinidia31621 Actinidia chinensis HOM05D003873 ORTHO05D004127 7.9e-09 63.9 63 58.7
Ca_12777_v3 Cicer arietinum L. HOM05D003873 ORTHO05D004127 1.0e-08 63.5 46 71.7
Hma1.2p1_0292F.1_g115900 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 1.0e-08 63.5 53 64.2
Hund15823 Selenicereus undatus HOM05D003873 ORTHO05D004127 2.3e-08 62.4 42 73.8
VMungo0647G2356 Vigna mungo HOM05D003873 ORTHO05D004127 3.0e-08 62.0 46 65.2
Prupe.2G262000 Prunus persica HOM05D003873 ORTHO05D004127 3.9e-08 61.6 44 65.9
RcHm_v2.0_Chr1g0371921 Rosa chinensis HOM05D003873 ORTHO05D004127 2.5e-07 58.9 43 67.4
Glyma.14G145000 Glycine max HOM05D003873 ORTHO05D004127 4.3e-07 58.2 56 55.4
Haze_17340 Corylus avellana HOM05D003873 ORTHO05D004127 9.6e-07 57.0 47 63.8
Nitab4.5_0002279g0070 Nicotiana tabacum HOM05D003873 ORTHO05D004127 9.6e-07 57.0 52 65.4
Phvul.001G074800 Phaseolus vulgaris HOM05D003873 ORTHO05D004127 9.6e-07 57.0 45 66.7
Lj5g0010993 Lotus japonicus HOM05D003873 ORTHO05D004127 1.3e-06 56.6 56 55.4
Nitab4.5_0000375g0180 Nicotiana tabacum HOM05D003873 ORTHO05D004127 1.3e-06 56.6 58 63.8
Solyc05g052260.3 Solanum lycopersicum HOM05D003873 ORTHO05D004127 1.3e-06 56.6 57 61.4
Hma1.2p1_0292F.1_g115890 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 1.6e-06 56.2 38 76.3
EL10Ac2g02628 Beta vulgaris HOM05D003873 ORTHO05D004127 2.1e-06 55.8 52 61.5
Cfa001222 Carpinus fangiana HOM05D003873 ORTHO05D004127 2.1e-06 55.8 47 63.8
Medtr1g007640 Medicago truncatula HOM05D003873 ORTHO05D004127 2.1e-06 55.8 46 65.2
Sopen05g030800 Solanum pennellii HOM05D003873 ORTHO05D004127 2.1e-06 55.8 57 59.6
TPR.G24518 Trifolium pratense HOM05D003873 ORTHO05D004127 2.1e-06 55.8 55 58.2
Sc11g0005790 Simmondsia chinensis HOM05D003873 ORTHO05D004127 2.8e-06 55.5 55 58.2
unitig_747.g21397 Utricularia gibba HOM05D003873 ORTHO05D004127 2.8e-06 55.5 40 70.0
AUR62024920 Chenopodium quinoa HOM05D003873 ORTHO05D004127 3.7e-06 55.1 48 66.7
arahy.Tifrunner.gnm1.ann1.HNCJ3C Arachis hypogaea HOM05D003873 ORTHO05D004127 4.8e-06 54.7 38 73.7
Carub.0004s2288 Capsella rubella HOM05D003873 ORTHO05D004127 4.8e-06 54.7 46 63.0
Lj1g0013289 Lotus japonicus HOM05D003873 ORTHO05D004127 4.8e-06 54.7 43 67.4
Aqoxy4G02389 Aquilegia oxysepala HOM05D003873 ORTHO05D004127 6.2e-06 54.3 46 65.2
Aqoxy4G02390 Aquilegia oxysepala HOM05D003873 ORTHO05D004127 6.2e-06 54.3 34 70.6
Migut.F00602 Erythranthe guttata HOM05D003873 ORTHO05D004127 6.2e-06 54.3 53 56.6
FAN03G1281 Fragaria x ananassa HOM05D003873 ORTHO05D004127 8.2e-06 53.9 52 53.8
Lj1C966G3 Lonicera japonica HOM05D003873 ORTHO05D004127 8.2e-06 53.9 38 71.1


User provided reference genes

Program Settings