Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 8.3e-216 753.4 383 100.0
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.8e-179 632.1 383 86.4
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.8e-138 496.5 399 69.9
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.7e-134 482.6 386 68.7
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.0e-133 479.2 386 68.4
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 8.2e-131 471.1 388 67.5
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 3.1e-130 469.2 386 66.6
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.5e-127 459.5 389 65.0
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.2e-127 458.8 374 67.4
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 7.2e-127 458.0 375 66.9
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 9.4e-127 457.6 379 65.4
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.2e-126 457.2 391 64.2
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.6e-126 455.7 392 64.3
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.0e-125 454.1 389 64.5
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.0e-125 454.1 395 64.8
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 8.8e-125 451.1 383 64.2
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 8.8e-125 451.1 380 65.3
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.5e-124 450.3 390 62.6
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.3e-124 449.1 390 63.1
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 4.4e-124 448.7 387 62.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.7e-123 446.8 388 63.1
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 2.8e-123 446.0 384 62.8
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 8.2e-123 444.5 391 62.4
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.1e-122 444.1 389 63.0
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 3.1e-122 442.6 389 62.0
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 7.0e-122 441.4 378 63.8
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 2.0e-121 439.9 391 61.9
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 3.5e-121 439.1 384 62.8
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 4.5e-121 438.7 389 61.2
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 5.9e-121 438.3 389 62.5
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.0e-120 437.6 383 62.4
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 1.3e-120 437.2 394 60.9
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.1e-119 434.1 390 60.5
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.5e-119 433.7 389 60.4
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.5e-119 433.0 383 62.4
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.2e-119 432.6 386 60.9
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.2e-118 430.6 386 60.6
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.2e-118 430.6 389 61.2
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.6e-118 430.3 388 60.3
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 2.7e-118 429.5 389 60.9
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 3.6e-118 429.1 381 60.9
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 3.6e-118 429.1 304 72.0
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.7e-118 428.7 385 59.0
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.7e-118 428.7 385 59.0
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.0e-118 427.9 388 60.1
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.0e-117 427.6 318 69.8
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 1.0e-117 427.6 318 69.8
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.0e-117 427.6 325 69.2
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.0e-117 427.6 382 62.3
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 1.0e-117 427.6 398 60.1
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.8e-117 426.8 389 61.2
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.3e-117 426.4 380 61.3
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 5.2e-117 425.2 383 61.4
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 5.2e-117 425.2 384 61.2
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 6.7e-117 424.9 399 60.4
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 8.8e-117 424.5 391 60.1
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 2.0e-116 423.3 388 60.8
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 3.3e-116 422.5 380 60.8
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.3e-116 422.5 394 60.4
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 3.3e-116 422.5 384 61.7
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 4.4e-116 422.2 367 61.9
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 5.7e-116 421.8 367 61.9
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 7.5e-116 421.4 386 59.6
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 7.5e-116 421.4 390 59.7
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.1e-114 417.5 387 60.2
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.1e-114 417.5 364 60.7
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.4e-114 417.2 390 60.8
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 1.4e-114 417.2 388 59.8
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 4.1e-114 415.6 368 62.8
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 5.3e-114 415.2 382 61.0
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 7.0e-114 414.8 318 66.4
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 7.0e-114 414.8 402 59.2
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 9.1e-114 414.5 381 60.9
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 1.3e-112 410.6 383 59.3
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.7e-112 410.2 371 60.4
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 8.5e-112 407.9 302 68.5
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 3.2e-111 406.0 386 59.3
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.6e-110 403.7 380 60.3
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.6e-110 403.7 302 67.9
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 4.7e-110 402.1 377 60.2
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 1.8e-109 400.2 381 58.0
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-107 394.0 310 67.1
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 2.2e-107 393.3 365 58.4
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 2.2e-107 393.3 365 58.4
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 4.8e-107 392.1 386 56.2
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 8.3e-107 391.3 346 60.1
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 8.3e-107 391.3 346 60.1
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 8.3e-107 391.3 374 58.3
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 8.3e-107 391.3 329 64.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 4.1e-106 389.0 359 57.9
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 3.5e-105 386.0 348 58.6
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 3.5e-105 386.0 464 49.6
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 6.5e-104 381.7 302 63.9
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 2.5e-103 379.8 377 55.7
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 4.2e-103 379.0 357 57.7
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 7.2e-103 378.3 378 55.0
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 9.4e-103 377.9 343 59.5
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.2e-102 377.5 302 66.6
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.7e-102 376.3 383 53.8
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.3e-101 373.2 304 61.8
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 4.0e-101 372.5 323 59.4
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.4e-100 369.0 376 54.0
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 7.5e-100 368.2 390 54.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.9e-99 365.5 302 62.6
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 9.2e-98 361.3 322 58.4
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 5.9e-97 358.6 376 51.3
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 2.1e-94 350.1 400 52.8
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 5.4e-90 335.5 372 49.2
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.2e-89 334.3 400 50.5
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 3.4e-84 316.2 334 50.0
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 6.4e-83 312.0 232 70.3
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 1.6e-81 307.4 384 50.3
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.9e-77 291.6 205 74.6
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 9.8e-76 288.1 211 74.4
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 4.1e-74 282.7 312 53.2
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.9e-67 260.0 211 65.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 3.5e-57 226.5 269 51.3
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.3e-56 223.8 207 58.9
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 3.3e-55 219.9 334 40.1
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 1.2e-52 211.5 288 41.0
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.5e-52 211.1 290 39.7
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 5.8e-52 209.1 202 55.9
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.4e-50 203.8 109 88.1
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.3e-48 198.0 306 36.6
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-48 197.2 181 61.3
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-48 197.2 181 61.3
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 8.1e-46 188.7 299 36.8
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.8e-45 187.6 222 51.4
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 4.9e-43 179.5 188 53.7
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 5.3e-37 159.5 311 31.2
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 5.5e-34 149.4 299 32.4
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.1e-33 147.5 93 79.6
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.7e-30 136.7 134 56.7
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.0e-28 131.0 103 66.0
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 2.6e-28 130.6 143 56.6
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 6.5e-27 125.9 105 61.9
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.9e-24 116.7 65 83.1
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.5e-23 114.8 65 81.5
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 3.3e-23 113.6 65 81.5
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 3.3e-23 113.6 267 28.1
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 5.3e-21 106.3 96 60.4
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 6.9e-21 105.9 106 55.7
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 6.9e-21 105.9 106 55.7
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.7e-19 101.3 70 70.0
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 2.1e-17 94.4 79 63.3
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 7.9e-17 92.4 80 57.5
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 3.0e-16 90.5 52 80.8
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 5.1e-16 89.7 142 41.5
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 5.1e-16 89.7 60 71.7
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 3.7e-14 83.6 47 83.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.1e-13 80.1 160 39.4
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.2e-10 70.5 46 71.7
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 1.3e-06 58.5 92 50.0


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