Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.0e-90 336.7 160 100.0
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.2e-79 297.7 160 89.4
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 6.8e-79 297.4 160 90.0
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.0e-78 295.8 160 88.1
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.6e-78 295.4 160 88.8
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.3e-77 293.1 160 88.1
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.3e-77 293.1 160 88.1
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.2e-77 292.4 160 86.2
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.8e-77 292.0 160 87.5
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 3.7e-77 291.6 160 87.5
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-36 154.8 109 64.2
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 5.4e-36 154.8 109 64.2
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.1e-36 154.5 109 63.3
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.5e-35 152.1 109 63.3
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 7.8e-35 151.0 109 63.3
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.0e-34 150.6 206 43.2
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.9e-23 111.3 135 41.5
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.0e-22 109.8 180 38.3
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.4e-22 109.0 180 38.3
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 2.9e-21 105.9 130 40.8
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 8.4e-21 104.4 135 38.5
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 2.5e-20 102.8 133 39.1
CSS0045174 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.5e-20 101.7 109 47.7
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 9.3e-20 100.9 133 39.1
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.2e-19 100.5 133 38.3
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-18 96.3 108 45.4
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 9.6e-17 90.9 184 31.5
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.6e-16 90.1 135 36.3
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.6e-16 90.1 66 59.1
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-15 85.5 129 34.9
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-15 84.3 118 39.8
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-14 82.4 136 35.3
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.5e-14 82.0 75 52.0
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.3e-13 80.5 76 50.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-13 79.7 132 35.6
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-13 79.7 136 34.6
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.2e-13 79.7 65 53.8
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.2e-13 79.7 77 48.1
CSS0019622 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.9e-13 78.6 60 61.7
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.4e-12 77.0 78 46.2
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-12 76.3 143 34.3
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-12 76.3 70 50.0
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.5e-12 76.3 65 52.3
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-12 75.9 129 34.1
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-12 75.5 132 34.1
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-12 74.7 136 33.1
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-12 74.7 137 32.8
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-12 74.7 133 33.1
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 7.1e-12 74.7 65 52.3
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 135 33.3
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-11 73.2 135 32.6
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 72.8 133 33.8
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 72.8 137 33.6
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 72 48.6
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 72 48.6
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 72 48.6
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 72 48.6
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 4.6e-11 72.0 137 32.8
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.6e-11 72.0 67 47.8
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 4.6e-11 72.0 71 50.7
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 6.1e-11 71.6 127 32.3
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 6.1e-11 71.6 127 32.3
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 137 31.4
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 67 46.3
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 7.9e-11 71.2 130 34.6
CSS0000617 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-10 70.5 82 46.3
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 70.5 129 34.1
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.3e-10 70.5 130 34.6
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-10 70.1 136 32.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-10 69.3 69 50.7
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 3.0e-10 69.3 71 45.1
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 72 47.2
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 137 31.4
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-10 68.6 69 49.3
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-10 68.6 69 50.7
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 67.4 133 31.6
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 83 38.6
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 137 31.4
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-09 66.6 131 31.3
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-09 66.2 71 46.5
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 3.3e-09 65.9 69 53.6
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 71 45.1
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 7.4e-09 64.7 67 50.7
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-09 64.7 113 33.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.9 74 45.9
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-08 63.5 69 46.4
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 63.2 132 31.1
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-08 62.4 68 45.6
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-07 60.8 113 33.6
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 1.4e-07 60.5 68 48.5
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.8e-07 60.1 79 38.0
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-07 60.1 134 27.6
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.7 48 54.2
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.4e-07 59.7 65 44.6
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 3.1e-07 59.3 122 28.7
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-07 59.3 70 42.9
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 4.1e-07 58.9 133 26.3
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 58.9 71 42.3
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-07 58.5 70 41.4
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-07 58.2 47 59.6
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 1.2e-06 57.4 113 31.9
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 57.0 47 53.2
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 57.0 70 42.9
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 3.4e-06 55.8 80 37.5
Aqoxy7G02369 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 3.4e-06 55.8 91 37.4
Aqoxy7G02373 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 3.4e-06 55.8 91 37.4
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.4e-06 55.8 109 34.9
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.4e-06 55.8 109 34.9
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.4e-06 55.8 109 34.9
Lj1g0006892 Lotus japonicus HOM05D000176 ORTHO05D000106 5.9e-06 55.1 93 37.6
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.7e-06 54.7 109 34.9
Aqoxy3G01281 Aquilegia oxysepala HOM05D025411 ORTHO05D000140 1.0e-05 54.3 83 36.1
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 34.9
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 111 37.8
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 34.9
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 34.9


User provided reference genes

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