Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036404 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.0e-231 806.6 471 100.0
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.2e-189 664.5 448 85.3
Actinidia01976 Actinidia chinensis HOM05D003021 ORTHO05D002235 3.9e-90 336.3 416 54.6
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.3e-65 253.4 371 49.9
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 1.1e-63 248.4 459 44.9
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 1.3e-58 231.5 464 47.8
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.3e-50 204.1 438 43.8
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 5.9e-46 189.5 431 41.8
TAR622G0013 Trochodendron aralioides HOM05D003021 ORTHO05D002235 6.5e-45 186.0 391 37.6
Rhsim09G0002000 Rhododendron simsii HOM05D001654 ORTHO05D002235 9.4e-44 182.2 335 44.2
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 2.7e-43 180.6 444 34.9
Cfa007625 Carpinus fangiana HOM05D003021 ORTHO05D002235 4.6e-43 179.9 559 32.0
Hma1.2p1_1813F.1_g303770 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 3.9e-42 176.8 516 36.0
Hma1.2p1_3044F.1_g332070 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 2.0e-41 174.5 516 36.8
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 1.5e-38 164.9 478 33.3
CiPaw.04G058300 Carya illinoinensis HOM05D003021 ORTHO05D002235 3.4e-38 163.7 579 31.1
Haze_14471 Corylus avellana HOM05D003021 ORTHO05D002235 3.4e-38 163.7 356 38.2
CiPaw.03G091400 Carya illinoinensis HOM05D003021 ORTHO05D002235 2.9e-37 160.6 520 32.3
TAR371G0449 Trochodendron aralioides HOM05D003021 ORTHO05D002235 9.4e-36 155.6 363 36.9
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 5.1e-34 149.8 572 30.1
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 2.6e-33 147.5 454 33.3
FAN09G3860 Fragaria x ananassa HOM05D003021 ORTHO05D002235 1.4e-31 141.7 424 33.5
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 5.3e-31 139.8 508 30.9
FAN05G2768 Fragaria x ananassa HOM05D003021 ORTHO05D002235 4.5e-30 136.7 457 32.8
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 7.7e-30 136.0 554 29.6
MD09G1061400 Malus domestica HOM05D003021 ORTHO05D002235 1.3e-29 135.2 507 30.6
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 6.5e-29 132.9 473 29.8
Atru.chr8.382 Acer truncatum HOM05D003021 ORTHO05D002235 8.5e-29 132.5 395 34.2
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 8.5e-29 132.5 293 39.2
Rhsim09G0190600 Rhododendron simsii HOM05D001654 ORTHO05D002235 8.5e-29 132.5 291 40.9
DCAR_011056 Daucus carota HOM05D003021 ORTHO05D002235 2.5e-28 131.0 390 31.8
FAN14G5480 Fragaria x ananassa HOM05D003021 ORTHO05D002235 8.0e-27 125.9 490 31.2
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 8.8e-26 122.5 325 35.4
FvH4_6g47500 Fragaria vesca HOM05D003021 ORTHO05D002235 5.7e-25 119.8 517 29.4
Prupe.3G258800 Prunus persica HOM05D003021 ORTHO05D002235 8.2e-24 115.9 557 28.4
Oeu000639.1 Olea europaea HOM05D003021 ORTHO05D002235 2.4e-23 114.4 289 36.3
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 2.4e-23 114.4 302 35.4
GSVIVG01011491001 Vitis vinifera HOM05D003021 ORTHO05D002235 2.4e-23 114.4 344 32.6
Glyma.19G027500 Glycine max HOM05D003021 ORTHO05D002235 1.3e-21 108.6 280 36.1
RcHm_v2.0_Chr2g0166531 Rosa chinensis HOM05D003021 ORTHO05D002235 2.2e-21 107.8 478 30.3
Rhsim09G0190800 Rhododendron simsii HOM05D001654 ORTHO05D002235 5.0e-21 106.7 154 50.6
VMungo0464G0637 Vigna mungo HOM05D003021 ORTHO05D002235 9.4e-20 102.4 244 36.5
Medtr6g013485 Medicago truncatula HOM05D003021 ORTHO05D002235 1.2e-19 102.1 261 37.2
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 1.2e-19 102.1 316 33.5
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 4.7e-19 100.1 277 40.1
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 6.1e-19 99.8 405 31.4
Phvul.004G033600 Phaseolus vulgaris HOM05D003021 ORTHO05D002235 8.0e-19 99.4 241 35.7
Cpa.g.sc14.145 Carica papaya HOM05D003021 ORTHO05D002235 1.0e-18 99.0 541 27.5
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 1.8e-18 98.2 443 29.6
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 2.3e-18 97.8 530 26.8
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 3.0e-18 97.4 298 34.2
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 6.8e-18 96.3 544 24.3
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 9.8e-17 92.4 295 33.6
Peaxi162Scf00166g00071 Petunia axillaris HOM05D003021 ORTHO05D002235 1.7e-16 91.7 291 33.7
THA.LOC104823896 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 6.3e-16 89.7 356 32.0
arahy.Tifrunner.gnm1.ann1.JN5ZJX Arachis hypogaea HOM05D003021 ORTHO05D002235 1.1e-15 89.0 258 34.9
Migut.H00652 Erythranthe guttata HOM05D003021 ORTHO05D002235 1.1e-15 89.0 308 34.7
Nitab4.5_0008213g0010 Nicotiana tabacum HOM05D003021 ORTHO05D002235 1.4e-15 88.6 320 31.6
PSO017G1133 Papaver somniferum HOM05D003021 ORTHO05D002235 2.4e-15 87.8 371 28.3
Glyma.13G058900 Glycine max HOM05D003021 ORTHO05D002235 3.1e-15 87.4 233 36.1
Nitab4.5_0000565g0110 Nicotiana tabacum HOM05D003021 ORTHO05D002235 3.1e-15 87.4 293 31.7
Ca_04869_v3 Cicer arietinum L. HOM05D003021 ORTHO05D002235 4.1e-15 87.0 401 30.4
Gohir.D04G045100 Gossypium hirsutum HOM05D003021 ORTHO05D002235 4.1e-15 87.0 289 36.7
Psat6g146680 Pisum sativum HOM05D003021 ORTHO05D002235 9.1e-15 85.9 240 34.6
QL10p018571 Quercus lobata HOM05D003021 ORTHO05D002235 2.7e-14 84.3 416 28.8
CAN.G289.53 Capsicum annuum HOM05D003021 ORTHO05D002235 1.3e-13 82.0 295 32.5
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 1.7e-13 81.6 280 35.0
Lj2g0010760 Lotus japonicus HOM05D003021 ORTHO05D002235 1.7e-13 81.6 164 40.2
Lalb_Chr06g0175101 Lupinus albus HOM05D003021 ORTHO05D002235 2.2e-13 81.3 189 35.4
CAN.G1627.8 Capsicum annuum HOM05D003021 ORTHO05D002065 3.8e-13 80.5 225 35.6
Actinidia09241 Actinidia chinensis HOM05D003021 ORTHO05D002235 1.9e-12 78.2 436 24.5
CAN.G289.54 Capsicum annuum HOM05D003021 ORTHO05D002235 1.6e-11 75.1 287 31.0
Nn4g23344 Nelumbo nucifera HOM05D003021 ORTHO05D002235 2.1e-11 74.7 410 26.6
THA.LOC104805496 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 2.1e-11 74.7 434 28.6
TPR.G26183 Trifolium pratense HOM05D003021 ORTHO05D002235 2.1e-11 74.7 231 34.6
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 1.0e-10 72.4 245 31.8
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 1.8e-10 71.6 595 23.4
HanXRQChr09g0264151 Helianthus annuus HOM05D003021 ORTHO05D002235 3.0e-10 70.9 251 34.3
PSO478G1157 Papaver somniferum HOM05D003021 ORTHO05D002235 4.0e-10 70.5 233 30.5
PGSC0003DMG400001352 Solanum tuberosum HOM05D003021 ORTHO05D002235 5.2e-10 70.1 290 27.9
Nitab4.5_0003145g0060 Nicotiana tabacum HOM05D003021 ORTHO05D002235 2.0e-09 68.2 232 32.3
Sed0010326 Sechium edule HOM05D003021 ORTHO05D002235 2.0e-09 68.2 278 29.5
A04p12060 Brassica napus HOM05D003021 ORTHO05D002235 2.6e-09 67.8 360 26.1
Thhalv10027728m.g Eutrema salsugineum HOM05D003021 ORTHO05D002235 1.3e-08 65.5 369 28.5
Lsat_1_v5_gn_4_170321 Lactuca sativa HOM05D003021 ORTHO05D002235 1.3e-08 65.5 368 29.1
Rhsim12G0153000 Rhododendron simsii HOM05D003021 ORTHO05D002235 2.2e-08 64.7 388 27.1
Solyc02g088580.1 Solanum lycopersicum HOM05D003021 ORTHO05D002235 4.9e-08 63.5 290 27.6
Sopen02g033310 Solanum pennellii HOM05D003021 ORTHO05D002235 4.9e-08 63.5 316 27.5
BraA04t16870Z Brassica rapa HOM05D003021 ORTHO05D002235 8.3e-08 62.8 362 26.2
Haze_07672 Corylus avellana HOM05D003021 ORTHO05D002235 1.4e-07 62.0 351 26.8
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 1.8e-07 61.6 311 28.3
HanXRQChr15g0488721 Helianthus annuus HOM05D003021 ORTHO05D002235 1.8e-07 61.6 263 31.6
Sc10g0003280 Simmondsia chinensis HOM05D003021 ORTHO05D002235 3.1e-07 60.8 414 26.1
Sp7g02590 Schrenkiella parvula HOM05D003021 ORTHO05D002235 5.4e-07 60.1 410 25.1
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 5.4e-07 60.1 342 28.1
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 1.2e-06 58.9 310 28.7
Dinv10680 Davidia involucrata HOM05D003021 ORTHO05D002235 1.2e-06 58.9 298 27.5
C04p45710 Brassica napus HOM05D003021 ORTHO05D002235 2.0e-06 58.2 363 27.0
BolC4t26155H Brassica oleracea HOM05D003021 ORTHO05D002235 2.0e-06 58.2 365 27.7
CAN.G411.102 Capsicum annuum HOM05D003021 ORTHO05D002235 2.0e-06 58.2 272 30.1
CAN.G206.199 Capsicum annuum HOM05D003021 ORTHO05D002235 2.7e-06 57.8 262 30.5
Ah.10g031940 Amaranthus hybridus HOM05D003021 ORTHO05D002235 3.5e-06 57.4 283 30.7
ECA238G3698 Erigeron canadensis HOM05D003021 ORTHO05D002235 3.5e-06 57.4 366 27.9
Nitab4.5_0000212g0140 Nicotiana tabacum HOM05D003021 ORTHO05D002235 7.7e-06 56.2 207 30.0


User provided reference genes

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