Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.6e-149 531.6 267 100.0
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.4e-148 529.6 267 99.6
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 1.3e-135 486.5 267 89.9
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 3.6e-133 478.4 267 88.4
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 3.6e-133 478.4 266 89.1
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.8e-132 476.1 267 89.1
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 8.8e-132 473.8 267 86.1
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.2e-131 473.4 268 88.4
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 7.5e-131 470.7 267 86.1
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 3.7e-130 468.4 267 85.8
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 2.4e-129 465.7 267 85.4
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 3.1e-129 465.3 267 86.5
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 3.1e-129 465.3 268 86.6
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 4.1e-129 464.9 267 85.8
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 5.4e-129 464.5 267 86.1
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 9.1e-129 463.8 267 85.4
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 2.0e-128 462.6 267 83.9
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 4.5e-128 461.5 267 84.6
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 1.7e-127 459.5 267 85.4
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 1.5e-126 456.4 268 85.1
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 1.9e-126 456.1 267 83.5
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 2.5e-126 455.7 267 83.1
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 5.5e-126 454.5 267 83.5
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 9.4e-126 453.8 264 83.3
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 9.4e-126 453.8 262 84.7
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 2.1e-125 452.6 268 84.3
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.1e-125 452.6 269 82.9
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 8.0e-125 450.7 267 84.3
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 8.0e-125 450.7 259 84.6
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 1.0e-124 450.3 267 81.6
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 1.0e-124 450.3 250 89.6
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 1.4e-124 449.9 267 83.1
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 3.0e-124 448.7 267 83.5
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 3.0e-124 448.7 264 84.1
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 4.0e-124 448.4 264 85.2
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 5.2e-124 448.0 269 84.8
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 8.8e-124 447.2 267 83.9
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.2e-123 446.8 265 84.9
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 1.5e-123 446.4 264 83.0
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.0e-123 446.0 255 88.6
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 2.0e-123 446.0 267 82.8
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 2.0e-123 446.0 262 82.8
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.4e-123 445.3 264 81.8
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 3.4e-123 445.3 262 82.8
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 4.4e-123 444.9 267 82.4
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.4e-123 444.9 267 81.6
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.4e-123 444.9 267 82.0
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 5.7e-123 444.5 267 82.0
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 2.2e-122 442.6 267 81.3
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 2.8e-122 442.2 274 81.8
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 3.7e-122 441.8 275 81.5
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 4.9e-122 441.4 268 83.6
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 1.1e-121 440.3 267 82.4
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 2.4e-121 439.1 267 82.8
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 3.1e-121 438.7 267 80.9
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 5.4e-121 438.0 259 82.6
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 5.4e-121 438.0 268 82.1
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 7.0e-121 437.6 267 81.3
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 7.0e-121 437.6 251 85.7
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.2e-120 436.8 268 80.6
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 3.5e-120 435.3 261 83.9
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 7.7e-120 434.1 270 81.1
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.7e-119 433.0 267 82.4
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 3.8e-119 431.8 266 82.0
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 8.6e-119 430.6 262 81.3
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 8.6e-119 430.6 265 81.1
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 1.5e-118 429.9 268 83.2
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 1.9e-118 429.5 267 81.3
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 3.3e-118 428.7 267 79.8
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 4.2e-118 428.3 267 79.8
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 7.2e-118 427.6 264 79.5
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 7.2e-118 427.6 267 79.8
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.2e-117 426.8 255 84.3
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 1.6e-117 426.4 267 79.4
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 1.6e-117 426.4 268 81.0
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 2.1e-117 426.0 267 80.9
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 2.8e-117 425.6 268 81.0
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 4.7e-117 424.9 267 80.9
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 8.0e-117 424.1 264 78.8
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 8.0e-117 424.1 261 80.5
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 1.4e-116 423.3 267 78.7
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 4.0e-116 421.8 267 79.4
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.5e-115 419.9 264 78.0
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 4.4e-115 418.3 250 82.4
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 1.3e-114 416.8 250 81.6
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 3.7e-114 415.2 294 74.1
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 1.4e-113 413.3 238 84.0
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 2.4e-113 412.5 267 77.9
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 7.0e-113 411.0 254 79.5
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 9.2e-113 410.6 291 74.2
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 9.2e-113 410.6 261 77.4
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 9.2e-113 410.6 308 70.8
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 1.2e-112 410.2 267 77.5
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.6e-112 408.3 264 77.3
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.7e-111 406.4 280 75.7
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 2.9e-111 405.6 284 75.7
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 1.1e-110 403.7 265 76.6
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 4.3e-110 401.7 259 77.6
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 7.3e-110 401.0 270 75.2
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 1.2e-109 400.2 320 67.5
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.1e-109 399.4 263 76.8
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 1.8e-108 396.4 269 75.1
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 9.8e-107 390.6 268 72.8
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 1.7e-106 389.8 252 77.8
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 3.7e-106 388.7 250 78.0
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 6.4e-106 387.9 256 76.6
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.4e-105 386.0 266 74.1
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 5.4e-105 384.8 260 74.6
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 3.5e-104 382.1 268 72.0
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.0e-103 380.6 257 73.5
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.0e-103 380.6 257 73.5
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 1.3e-103 380.2 275 73.1
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 9.5e-102 374.0 266 72.9
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 9.5e-102 374.0 265 70.9
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 3.1e-100 369.0 262 71.8
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 6.8e-100 367.9 257 72.4
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 8.9e-100 367.5 262 71.8
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.2e-99 367.1 262 71.8
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 1.5e-99 366.7 268 70.9
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 2.6e-99 365.9 262 71.0
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 3.4e-99 365.5 262 70.2
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 3.4e-99 365.5 262 71.4
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 9.8e-99 364.0 263 70.7
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 1.3e-98 363.6 262 70.6
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 1.7e-98 363.2 262 71.0
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 2.2e-98 362.8 262 71.8
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 2.2e-98 362.8 262 71.8
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 4.9e-98 361.7 227 79.7
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 1.4e-97 360.1 262 71.0
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 4.1e-97 358.6 257 71.2
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 5.4e-97 358.2 267 71.5
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 9.2e-97 357.5 262 72.5
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 6.0e-96 354.8 260 70.0
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 6.0e-96 354.8 281 67.6
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.3e-95 353.6 253 70.8
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 3.0e-95 352.4 262 70.2
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 3.9e-95 352.1 235 74.9
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 3.3e-94 349.0 261 68.6
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 4.1e-89 332.0 206 81.6
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.1e-88 329.7 261 65.9
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 7.8e-88 327.8 266 64.7
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 1.0e-87 327.4 199 81.4
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 1.0e-87 327.4 264 63.6
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 5.2e-84 315.1 266 62.8
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 6.8e-84 314.7 262 63.0
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 2.6e-83 312.8 198 78.3
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 7.6e-83 311.2 241 69.7
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 8.4e-82 307.8 263 62.0
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 7.1e-81 304.7 262 60.3
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 4.2e-73 278.9 189 74.6
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.6e-72 275.4 173 77.5
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.1e-68 264.2 144 88.9
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 2.7e-48 196.4 121 82.6
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 4.1e-44 182.6 212 50.5
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 4.6e-40 169.1 107 78.5
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 7.9e-40 168.3 242 43.4
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 3.9e-39 166.0 147 60.5
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 2.8e-37 159.8 193 45.1
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.8e-31 140.6 93 74.2
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.7e-29 134.0 74 90.5
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-27 125.6 236 39.4
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.0e-26 124.8 76 81.6
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 3.5e-19 99.8 92 57.6
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 3.5e-19 99.8 186 38.7
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 3.8e-18 96.3 150 36.7
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 1.6e-16 90.9 124 50.0
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 4.4e-14 82.8 40 97.5
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 7.0e-12 75.5 144 36.8
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.9e-10 70.1 41 75.6
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 8.5e-10 68.6 138 36.2
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 1.1e-09 68.2 43 67.4
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.8e-07 60.8 86 36.0


User provided reference genes

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