Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.0e-41 172.9 87 100.0
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.0e-20 101.7 87 69.0
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.2e-16 89.7 97 58.8
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 2.0e-16 89.0 87 58.6
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 2.0e-16 89.0 103 54.4
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 2.6e-16 88.6 99 55.6
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 3.4e-16 88.2 86 55.8
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 5.8e-16 87.4 94 55.3
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 1.3e-15 86.3 93 54.8
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 2.9e-15 85.1 100 51.0
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 2.9e-15 85.1 85 55.3
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 3.8e-15 84.7 97 54.6
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 4.9e-15 84.3 92 54.3
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 4.9e-15 84.3 97 52.6
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 6.4e-15 84.0 86 55.8
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 8.4e-15 83.6 91 54.9
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.4e-14 82.8 90 54.4
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.4e-14 82.8 92 51.1
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 1.4e-14 82.8 85 54.1
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 1.9e-14 82.4 97 55.7
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 1.9e-14 82.4 89 56.2
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 2.4e-14 82.0 97 52.6
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 2.4e-14 82.0 90 55.6
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.4e-14 82.0 97 52.6
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 2.4e-14 82.0 96 55.2
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 4.2e-14 81.3 92 54.3
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 5.4e-14 80.9 92 52.2
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 9.2e-14 80.1 95 52.6
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 9.2e-14 80.1 90 52.2
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 1.2e-13 79.7 88 55.7
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 1.6e-13 79.3 93 48.4
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.1e-13 79.0 90 52.2
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 2.1e-13 79.0 95 53.7
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 2.7e-13 78.6 93 51.6
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 2.7e-13 78.6 91 51.6
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 2.7e-13 78.6 90 53.3
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.5e-13 78.2 93 54.8
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 4.6e-13 77.8 94 52.1
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 6.0e-13 77.4 98 52.0
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 7.8e-13 77.0 87 49.4
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.0e-12 76.6 95 52.6
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.0e-12 76.6 101 48.5
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 1.7e-12 75.9 90 53.3
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 3.0e-12 75.1 95 52.6
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 3.0e-12 75.1 95 52.6
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.1e-12 74.3 83 54.2
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.6e-12 73.9 95 51.6
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.6e-12 73.9 95 52.6
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.1e-11 73.2 83 54.2
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.1e-11 73.2 85 52.9
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 1.1e-11 73.2 88 56.8
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 1.9e-11 72.4 84 50.0
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.9e-11 72.4 85 52.9
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.5e-11 72.0 35 91.4
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.5e-11 72.0 35 91.4
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 2.5e-11 72.0 96 51.0
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.5e-11 72.0 94 46.8
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 3.3e-11 71.6 85 51.8
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 3.3e-11 71.6 90 51.1
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 5.6e-11 70.9 88 51.1
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.6e-11 70.9 83 53.0
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 7.3e-11 70.5 84 52.4
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 7.3e-11 70.5 84 45.2
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 9.6e-11 70.1 32 96.9
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 9.6e-11 70.1 83 53.0
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 9.6e-11 70.1 34 91.2
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 2.1e-10 68.9 88 48.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 2.8e-10 68.6 101 48.5
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 3.6e-10 68.2 89 50.6
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 4.8e-10 67.8 89 47.2
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 6.2e-10 67.4 96 50.0
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 8.1e-10 67.0 92 44.6
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 8.1e-10 67.0 88 45.5
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 8.1e-10 67.0 33 87.9
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 1.8e-09 65.9 86 47.7
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.8e-09 65.9 97 44.3
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 3.1e-09 65.1 91 49.5
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 3.1e-09 65.1 97 47.4
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 5.3e-09 64.3 34 79.4
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 5.3e-09 64.3 83 42.2
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 6.9e-09 63.9 97 46.4
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.2e-08 63.2 33 84.8
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 1.5e-08 62.8 88 43.2
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 2.0e-08 62.4 87 52.9
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 3.4e-08 61.6 88 42.0
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 3.4e-08 61.6 93 46.2
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 3.4e-08 61.6 93 41.9
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 4.4e-08 61.2 89 48.3
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 1.3e-07 59.7 88 42.0
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 1.3e-07 59.7 91 45.1
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 1.7e-07 59.3 88 40.9
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 3.8e-07 58.2 88 40.9
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 3.8e-07 58.2 88 40.9
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 4.9e-07 57.8 88 37.5
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 6.4e-07 57.4 85 37.6
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 6.4e-07 57.4 85 37.6
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 8.4e-07 57.0 85 37.6
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 8.4e-07 57.0 85 37.6
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 1.4e-06 56.2 32 68.8
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 1.9e-06 55.8 82 42.7
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 4.2e-06 54.7 103 38.8
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 5.4e-06 54.3 107 39.3
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 5.4e-06 54.3 35 68.6
BcaB03g11823 Brassica carinata HOM05D006691 ORTHO05D007620 7.1e-06 53.9 88 38.6
BolC1t00407H Brassica oleracea HOM05D006691 ORTHO05D007620 7.1e-06 53.9 91 36.3
CDE06G1180 Ceratophyllum demersum HOM05D006691 ORTHO05D007620 9.3e-06 53.5 51 51.0
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 9.3e-06 53.5 33 63.6


User provided reference genes

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