Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036295 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 2.1e-80 302.4 158 100.0
CSS0034426 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 6.3e-69 264.2 157 88.5
CSS0043793 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 6.3e-69 264.2 157 88.5
Lsat_1_v5_gn_9_109600 Lactuca sativa HOM05D007015 ORTHO05D007679 2.0e-62 242.7 157 80.3
Duzib132G0398 Durio zibethinus HOM05D007015 ORTHO05D007679 1.7e-61 239.6 156 78.2
COL.COLO4_25926 Corchorus olitorius HOM05D007015 ORTHO05D007679 1.1e-60 236.9 156 77.6
Gohir.A13G034500 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.8e-60 236.1 156 76.9
SGA_v2.0_scaffold32G13158 Striga asiatica HOM05D007015 ORTHO05D007679 1.8e-60 236.1 156 78.2
ECA240G3875 Erigeron canadensis HOM05D007015 ORTHO05D007679 2.4e-60 235.7 157 77.7
Potri.004G154600 Populus trichocarpa HOM05D007015 ORTHO05D007679 4.1e-60 235.0 156 76.9
Gohir.D13G032901 Gossypium hirsutum HOM05D007015 ORTHO05D007679 5.3e-60 234.6 156 76.3
Gorai.013G037300 Gossypium raimondii HOM05D007015 ORTHO05D007679 5.3e-60 234.6 156 76.3
Dinv23523 Davidia involucrata HOM05D007015 ORTHO05D007679 7.0e-60 234.2 156 78.2
Nn1g04999 Nelumbo nucifera HOM05D007015 ORTHO05D007679 9.1e-60 233.8 157 75.8
Lj9C370G1 Lonicera japonica HOM05D007015 ORTHO05D007679 1.2e-59 233.4 156 77.6
Lj9C372G4 Lonicera japonica HOM05D007015 ORTHO05D007679 1.2e-59 233.4 156 77.6
Manes.15G163500 Manihot esculenta HOM05D007015 ORTHO05D007679 1.6e-59 233.0 156 75.6
Nn5g29599 Nelumbo nucifera HOM05D007015 ORTHO05D007679 2.0e-59 232.6 157 75.8
TAR625G0084 Trochodendron aralioides HOM05D007015 ORTHO05D007679 4.5e-59 231.5 156 76.9
TAR625G0285 Trochodendron aralioides HOM05D007015 ORTHO05D007679 4.5e-59 231.5 156 76.9
TWI79G1149 Tripterygium wilfordii HOM05D007015 ORTHO05D007679 1.3e-58 229.9 156 76.3
Duzib052G0472 Durio zibethinus HOM05D007015 ORTHO05D007679 2.2e-58 229.2 156 75.0
Haze_02382 Corylus avellana HOM05D007015 ORTHO05D007679 3.8e-58 228.4 156 73.1
Thecc.02G085800 Theobroma cacao HOM05D007015 ORTHO05D007679 3.8e-58 228.4 156 75.6
Cfa005006 Carpinus fangiana HOM05D007015 ORTHO05D007679 6.5e-58 227.6 156 72.4
MSTRG.27699 Avicennia marina HOM05D007015 ORTHO05D007679 1.1e-57 226.9 156 75.0
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 1.9e-57 226.1 156 73.7
PGR142G1975 Punica granatum HOM05D007015 ORTHO05D007679 4.2e-57 224.9 156 74.4
Sed0022084 Sechium edule HOM05D007015 ORTHO05D007679 5.5e-57 224.6 156 73.7
HanXRQChr03g0061181 Helianthus annuus HOM05D007015 ORTHO05D007679 7.2e-57 224.2 157 75.8
THA.LOC104807318 Tarenaya hassleriana HOM05D007015 ORTHO05D007679 9.4e-57 223.8 156 72.4
CiPaw.05G064200 Carya illinoinensis HOM05D007015 ORTHO05D007679 1.2e-56 223.4 156 70.5
CAN.G1412.4 Capsicum annuum HOM05D007015 ORTHO05D007679 1.6e-56 223.0 156 75.6
Sabra04G0102600 Salix brachista HOM05D007015 ORTHO05D007679 2.1e-56 222.6 156 72.4
MELO3C012524.2 Cucumis melo HOM05D007015 ORTHO05D007679 3.6e-56 221.9 155 72.9
MSTRG.20084 Avicennia marina HOM05D007015 ORTHO05D007679 6.1e-56 221.1 156 73.7
Nitab4.5_0000308g0060 Nicotiana tabacum HOM05D007015 ORTHO05D007679 6.1e-56 221.1 156 74.4
CsaV3_7G023540 Cucumis sativus L. HOM05D007015 ORTHO05D007679 1.0e-55 220.3 155 72.9
Migut.B00238 Erythranthe guttata HOM05D007015 ORTHO05D007679 1.0e-55 220.3 156 74.4
Ciclev10028323m.g Citrus clementina HOM05D007015 ORTHO05D007679 1.8e-55 219.5 156 71.8
Nitab4.5_0004172g0110 Nicotiana tabacum HOM05D007015 ORTHO05D007679 1.8e-55 219.5 156 73.7
CiPaw.06G135500 Carya illinoinensis HOM05D007015 ORTHO05D007679 2.3e-55 219.2 156 69.9
ClCG02G005030 Citrullus lanatus HOM05D007015 ORTHO05D007679 5.2e-55 218.0 155 72.3
Hund06231 Selenicereus undatus HOM05D007015 ORTHO05D007679 8.8e-55 217.2 156 72.4
EL10Ac9g21726 Beta vulgaris HOM05D007015 ORTHO05D007679 1.5e-54 216.5 156 72.4
Peaxi162Scf00016g00829 Petunia axillaris HOM05D007015 ORTHO05D007679 5.7e-54 214.5 156 71.8
Rhsim11G0176800 Rhododendron simsii HOM05D007015 ORTHO05D007679 5.7e-54 214.5 158 70.9
Ah.01g019410 Amaranthus hybridus HOM05D007015 ORTHO05D007679 7.5e-54 214.2 156 69.9
AUR62011326 Chenopodium quinoa HOM05D007015 ORTHO05D007679 9.7e-54 213.8 156 71.8
PGSC0003DMG400000706 Solanum tuberosum HOM05D007015 ORTHO05D007679 9.7e-54 213.8 156 72.4
Sc14g0002090 Simmondsia chinensis HOM05D007015 ORTHO05D007679 2.2e-53 212.6 156 71.8
AUR62016734 Chenopodium quinoa HOM05D007015 ORTHO05D007679 3.7e-53 211.8 156 70.5
Sed0027719 Sechium edule HOM05D007015 ORTHO05D007679 3.7e-53 211.8 156 68.6
Sopen01g051790 Solanum pennellii HOM05D007015 ORTHO05D007679 4.8e-53 211.5 156 71.8
Gohir.A12G028600 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.1e-52 210.3 156 69.2
Hund00268 Selenicereus undatus HOM05D007015 ORTHO05D007679 7.0e-52 207.6 158 68.4
Gorai.008G028700 Gossypium raimondii HOM05D007015 ORTHO05D007679 9.1e-52 207.2 156 68.6
CDE04G3710 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 4.5e-51 204.9 156 67.9
ATR0733G072 Amborella trichopoda HOM05D007015 ORTHO05D007679 7.7e-51 204.1 156 69.2
arahy.Tifrunner.gnm1.ann1.9AGX7Y Arachis hypogaea HOM05D007015 ORTHO05D007679 1.7e-50 203.0 156 67.3
unitig_744.g24247 Utricularia gibba HOM05D002700 ORTHO05D003228 2.9e-50 202.2 155 66.5
Lj3g0008828 Lotus japonicus HOM05D007015 ORTHO05D007679 5.0e-50 201.4 156 67.3
FvH4_2g08750 Fragaria vesca HOM05D007015 ORTHO05D007679 6.5e-50 201.1 156 67.9
arahy.Tifrunner.gnm1.ann1.VXY3NA Arachis hypogaea HOM05D007015 ORTHO05D007679 8.5e-50 200.7 156 67.3
PSO700G0017 Papaver somniferum HOM05D007015 ORTHO05D007679 1.1e-49 200.3 157 65.6
FAN24G0062 Fragaria x ananassa HOM05D007015 ORTHO05D007679 1.5e-49 199.9 156 67.9
FAN15G1974 Fragaria x ananassa HOM05D007015 ORTHO05D007679 1.9e-49 199.5 156 67.3
RcHm_v2.0_Chr6g0264211 Rosa chinensis HOM05D007015 ORTHO05D007679 3.2e-49 198.7 156 67.3
FAN20G1161 Fragaria x ananassa HOM05D007015 ORTHO05D007679 4.2e-49 198.4 156 67.3
CDE02G1906 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 7.2e-49 197.6 156 66.0
QL11p043649 Quercus lobata HOM05D007015 ORTHO05D007679 2.7e-48 195.7 156 66.0
TPR.G20759 Trifolium pratense HOM05D007015 ORTHO05D007679 3.6e-48 195.3 156 64.7
MBI16_g42991_MAGBIO Magnolia biondii HOM05D007015 ORTHO05D007679 4.7e-48 194.9 157 65.0
Oeu020759.1 Olea europaea HOM05D007015 ORTHO05D007679 4.7e-48 194.9 126 80.2
Lalb_Chr01g0002571 Lupinus albus HOM05D007015 ORTHO05D007679 8.0e-48 194.1 156 65.4
Glyma.11G118100 Glycine max HOM05D007015 ORTHO05D007679 1.0e-47 193.7 156 64.7
Phvul.011G045500 Phaseolus vulgaris HOM05D007015 ORTHO05D007679 1.0e-47 193.7 152 65.8
MD05G1066700 Malus domestica HOM05D007015 ORTHO05D007679 1.4e-47 193.4 156 64.7
Atru.chr5.3012 Acer truncatum HOM05D007015 ORTHO05D007679 1.8e-47 193.0 142 72.5
VMungo1127G1579 Vigna mungo HOM05D007015 ORTHO05D007679 2.3e-47 192.6 156 62.8
SEGI_27995 Sequoiadendron giganteum HOM05D007015 ORTHO05D007679 3.0e-47 192.2 156 64.1
Ca_20873_v3 Cicer arietinum L. HOM05D007015 ORTHO05D007679 5.2e-47 191.4 156 63.5
vmacro02110 Vaccinium macrocarpon HOM05D007015 ORTHO05D007679 6.8e-47 191.0 159 65.4
Prupe.8G097400 Prunus persica HOM05D007015 ORTHO05D007679 1.5e-46 189.9 156 63.5
Psat7g184640 Pisum sativum HOM05D007015 ORTHO05D007679 2.0e-46 189.5 156 62.8
MD10G1076600 Malus domestica HOM05D007015 ORTHO05D007679 2.6e-46 189.1 156 64.1
Gohir.D12G028100 Gossypium hirsutum HOM05D007015 ORTHO05D007679 9.8e-46 187.2 156 64.7
Glyma.12G043500 Glycine max HOM05D007015 ORTHO05D007679 1.3e-45 186.8 156 63.5
TAR381G1286 Trochodendron aralioides HOM05D007015 ORTHO05D007679 1.7e-45 186.4 156 66.0
MSTRG.5397 Avicennia marina HOM05D007015 ORTHO05D007679 3.1e-44 182.2 155 62.6
Medtr4g070010 Medicago truncatula HOM05D007015 ORTHO05D007679 1.6e-43 179.9 158 58.9
Aqoxy5G01645 Aquilegia oxysepala HOM05D007015 ORTHO05D007679 7.7e-43 177.6 169 59.2
Eucgr.I01267 Eucalyptus grandis HOM05D007015 ORTHO05D007679 2.9e-42 175.6 161 59.0
DCAR_028986 Daucus carota HOM05D007015 ORTHO05D007679 3.8e-42 175.3 157 59.2
SalBow3G2347 Salvia bowleyana HOM05D007015 ORTHO05D007679 1.5e-41 173.3 155 61.3
Actinidia00522 Actinidia chinensis HOM05D007015 ORTHO05D007679 8.8e-39 164.1 114 76.3
HPP92_013431 Vanilla planifolia HOM05D007015 ORTHO05D007679 9.8e-38 160.6 163 54.6
HPP92_027117 Vanilla planifolia HOM05D007015 ORTHO05D007679 9.8e-38 160.6 163 54.6
Nn1g01371 Nelumbo nucifera HOM05D007015 ORTHO05D007679 1.3e-37 160.2 110 73.6
SMO367G0892 Selaginella moellendorffii HOM05D007015 ORTHO05D007679 1.7e-37 159.8 155 53.5
Pp3c14_3730 Physcomitrium patens HOM05D007015 ORTHO05D007679 7.7e-35 151.0 155 52.3
Pp3c1_20790 Physcomitrium patens HOM05D007015 ORTHO05D007679 8.6e-34 147.5 155 51.0
AagrBONN_evm.TU.Sc2ySwM_117.322 Anthoceros agrestis HOM05D007015 ORTHO05D007679 3.3e-33 145.6 156 51.3
Os03g0723600 Oryza sativa ssp. japonica HOM05D007015 ORTHO05D007679 8.9e-31 137.5 168 48.2
Zm00001eb215850 Zea mays HOM05D007015 ORTHO05D007679 4.9e-29 131.7 168 47.6
CBR_g34278 Chara braunii HOM05D007015 ORTHO05D007679 1.6e-27 126.7 158 44.3
SGA_v2.0_scaffold64G21857 Striga asiatica HOM05D007015 ORTHO05D007679 2.0e-19 99.8 84 64.3
VMungo1080G1863 Vigna mungo HOM05D007015 ORTHO05D007679 3.4e-14 82.4 62 67.7


User provided reference genes

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