Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036272 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 1.2e-73 279.6 136 100.0
CSS0012367 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 9.6e-50 200.3 175 66.3
Migut.M01973 Erythranthe guttata HOM05D004878 ORTHO05D006497 2.2e-25 119.4 109 63.3
Rhsim13G0131200 Rhododendron simsii HOM05D004878 ORTHO05D006497 3.7e-25 118.6 109 64.2
GSVIVG01012083001 Vitis vinifera HOM05D004878 ORTHO05D006497 3.7e-25 118.6 109 64.2
CSS0029949 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 4.8e-25 118.2 109 65.1
Potri.012G120492 Populus trichocarpa HOM05D004878 ORTHO05D006497 4.8e-25 118.2 109 64.2
Potri.015G120400 Populus trichocarpa HOM05D004878 ORTHO05D006497 4.8e-25 118.2 109 64.2
PGR042G0940 Punica granatum HOM05D004878 ORTHO05D006497 4.8e-25 118.2 103 63.1
TAR624G0003 Trochodendron aralioides HOM05D004878 ORTHO05D006497 6.3e-25 117.9 109 62.4
CANSAT35G1110 Cannabis sativa HOM05D004878 ORTHO05D006497 8.2e-25 117.5 109 61.5
Thecc.06G141500 Theobroma cacao HOM05D004878 ORTHO05D006497 1.4e-24 116.7 109 62.4
FvH4_3g12170 Fragaria vesca HOM05D004878 ORTHO05D006497 1.8e-24 116.3 109 63.3
MD10G1234100 Malus domestica HOM05D004878 ORTHO05D006497 1.8e-24 116.3 109 63.3
PSO675G2265 Papaver somniferum HOM05D004878 ORTHO05D006497 1.8e-24 116.3 109 62.4
PSO675G3235 Papaver somniferum HOM05D004878 ORTHO05D006497 1.8e-24 116.3 109 62.4
ATR0763G188 Amborella trichopoda HOM05D004878 ORTHO05D006497 2.4e-24 115.9 109 61.5
Aqoxy3G04145 Aquilegia oxysepala HOM05D004878 ORTHO05D006497 2.4e-24 115.9 109 61.5
Ca_04469_v3 Cicer arietinum L. HOM05D004878 ORTHO05D006497 2.4e-24 115.9 109 62.4
Ciclev10015670m.g Citrus clementina HOM05D004878 ORTHO05D006497 2.4e-24 115.9 109 62.4
FAN16G2586 Fragaria x ananassa HOM05D004878 ORTHO05D006497 2.4e-24 115.9 109 63.3
FAN21G2052 Fragaria x ananassa HOM05D004878 ORTHO05D006497 2.4e-24 115.9 109 63.3
DCAR_003786 Daucus carota HOM05D004878 ORTHO05D006497 3.1e-24 115.5 109 62.4
Gohir.A05G144900 Gossypium hirsutum HOM05D004878 ORTHO05D006497 3.1e-24 115.5 109 61.5
Gohir.D05G147300 Gossypium hirsutum HOM05D004878 ORTHO05D006497 3.1e-24 115.5 109 61.5
Gorai.009G151300 Gossypium raimondii HOM05D004878 ORTHO05D006497 3.1e-24 115.5 109 61.5
SGA_v2.0_scaffold175G39366 Striga asiatica HOM05D004878 ORTHO05D006497 3.1e-24 115.5 107 61.7
RcHm_v2.0_Chr5g0019961 Rosa chinensis HOM05D004878 ORTHO05D006497 4.1e-24 115.2 109 62.4
SalBow8G2261 Salvia bowleyana HOM05D004878 ORTHO05D006497 4.1e-24 115.2 109 59.6
MBI01_g44876_MAGBIO Magnolia biondii HOM05D004878 ORTHO05D006497 5.3e-24 114.8 109 61.5
Atru.chr10.492 Acer truncatum HOM05D004878 ORTHO05D006497 6.9e-24 114.4 109 62.4
Sabra12G0088600 Salix brachista HOM05D004878 ORTHO05D006497 6.9e-24 114.4 109 62.4
Sabra12G0091900 Salix brachista HOM05D004878 ORTHO05D006497 6.9e-24 114.4 109 62.4
unitig_27.g24819 Utricularia gibba HOM05D004878 ORTHO05D006497 6.9e-24 114.4 109 58.7
Actinidia33655 Actinidia chinensis HOM05D004878 ORTHO05D006497 9.0e-24 114.0 109 61.5
CDE05G2830 Ceratophyllum demersum HOM05D004878 ORTHO05D006497 9.0e-24 114.0 109 60.6
FAN25G2275 Fragaria x ananassa HOM05D004878 ORTHO05D006497 9.0e-24 114.0 107 62.6
MD05G1253100 Malus domestica HOM05D004878 ORTHO05D006497 9.0e-24 114.0 109 62.4
COL.COLO4_30984 Corchorus olitorius HOM05D004878 ORTHO05D006497 1.2e-23 113.6 109 61.5
Peaxi162Scf00149g00811 Petunia axillaris HOM05D004878 ORTHO05D006497 1.2e-23 113.6 113 59.3
Sc10g0005320 Simmondsia chinensis HOM05D004878 ORTHO05D006497 1.2e-23 113.6 109 61.5
TWI63G1027 Tripterygium wilfordii HOM05D004878 ORTHO05D006497 1.2e-23 113.6 109 60.6
AT1G31190 Arabidopsis thaliana HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
BcaB07g32781 Brassica carinata HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
A09p35050 Brassica napus HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
BraA09t39036Z Brassica rapa HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
Carub.0001s2959 Capsella rubella HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
CARHR030660 Cardamine hirsuta HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
Duzib235G0192 Durio zibethinus HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 59.6
Thhalv10007962m.g Eutrema salsugineum HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
Sp1g27010 Schrenkiella parvula HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 60.6
Sed0019791 Sechium edule HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 62.4
VMungo1309G2006 Vigna mungo HOM05D004878 ORTHO05D006497 1.5e-23 113.2 109 61.5
ClCG01G010320 Citrullus lanatus HOM05D004878 ORTHO05D006497 2.0e-23 112.8 110 60.0
Lsat_1_v5_gn_5_36260 Lactuca sativa HOM05D004878 ORTHO05D006497 2.0e-23 112.8 113 57.5
Nn7g38129 Nelumbo nucifera HOM05D004878 ORTHO05D006497 2.0e-23 112.8 109 60.6
MSTRG.16341 Avicennia marina HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 58.7
BcaC05g27149 Brassica carinata HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 60.6
C05p30360 Brassica napus HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 60.6
BolC5t31775H Brassica oleracea HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 60.6
MELO3C025560.2 Cucumis melo HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 60.6
CsaV3_1G017150 Cucumis sativus L. HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 60.6
TPR.G9524 Trifolium pratense HOM05D004878 ORTHO05D006497 2.6e-23 112.5 109 61.5
AL1G49290 Arabidopsis lyrata HOM05D004878 ORTHO05D006497 3.4e-23 112.1 109 59.6
Lj1A1144T48 Lonicera japonica HOM05D004878 ORTHO05D006497 3.4e-23 112.1 109 59.6
Manes.16G059325 Manihot esculenta HOM05D004878 ORTHO05D006497 3.4e-23 112.1 109 59.6
Phvul.009G205700 Phaseolus vulgaris HOM05D004878 ORTHO05D006497 3.4e-23 112.1 109 60.6
CAN.G519.8 Capsicum annuum HOM05D004878 ORTHO05D006497 4.5e-23 111.7 109 60.6
ECA246G0899 Erigeron canadensis HOM05D004878 ORTHO05D006497 4.5e-23 111.7 109 59.6
Solyc02g069010.4 Solanum lycopersicum HOM05D004878 ORTHO05D006497 4.5e-23 111.7 109 60.6
Sopen02g018080 Solanum pennellii HOM05D004878 ORTHO05D006497 4.5e-23 111.7 109 60.6
Medtr0151s0030 Medicago truncatula HOM05D004878 ORTHO05D006497 5.9e-23 111.3 109 60.6
Cc09_g06230 Coffea canephora HOM05D004878 ORTHO05D006497 7.6e-23 110.9 109 59.6
Cpa.g.sc135.22 Carica papaya HOM05D004878 ORTHO05D006497 1.0e-22 110.5 136 50.0
Glyma.06G218300 Glycine max HOM05D004878 ORTHO05D006497 1.0e-22 110.5 109 59.6
Eucgr.E01881 Eucalyptus grandis HOM05D004878 ORTHO05D006497 1.3e-22 110.2 109 58.7
HanXRQChr12g0378221 Helianthus annuus HOM05D004878 ORTHO05D006497 1.3e-22 110.2 109 58.7
THA.LOC104798550 Tarenaya hassleriana HOM05D004878 ORTHO05D006497 1.3e-22 110.2 109 58.7
Aa31LG2G15140 Aethionema arabicum HOM05D004878 ORTHO05D006497 1.7e-22 109.8 109 57.8
Lalb_Chr11g0072281 Lupinus albus HOM05D004878 ORTHO05D006497 2.2e-22 109.4 109 58.7
Nitab4.5_0002056g0080 Nicotiana tabacum HOM05D004878 ORTHO05D006497 2.2e-22 109.4 109 58.7
QL11p017966 Quercus lobata HOM05D004878 ORTHO05D006497 2.2e-22 109.4 109 58.7
Lj6g0027572 Lotus japonicus HOM05D004878 ORTHO05D006497 2.9e-22 109.0 109 58.7
Psat1g023920 Pisum sativum HOM05D004878 ORTHO05D006497 2.9e-22 109.0 109 58.7
HPP92_028557 Vanilla planifolia HOM05D004878 ORTHO05D006497 2.9e-22 109.0 109 57.8
arahy.Tifrunner.gnm1.ann1.6I23D0 Arachis hypogaea HOM05D004878 ORTHO05D006497 3.8e-22 108.6 109 57.8
arahy.Tifrunner.gnm1.ann1.RY21T0 Arachis hypogaea HOM05D004878 ORTHO05D006497 3.8e-22 108.6 109 57.8
Cfa000720 Carpinus fangiana HOM05D004878 ORTHO05D006497 3.8e-22 108.6 109 59.6
Os02g0169900 Oryza sativa ssp. japonica HOM05D004878 ORTHO05D006497 3.8e-22 108.6 100 59.0
Zm00001eb207300 Zea mays HOM05D004878 ORTHO05D006497 3.8e-22 108.6 100 59.0
AUR62032164 Chenopodium quinoa HOM05D004878 ORTHO05D006497 5.0e-22 108.2 109 58.7
AUR62036922 Chenopodium quinoa HOM05D004878 ORTHO05D006497 5.0e-22 108.2 109 58.7
vmacro03511 Vaccinium macrocarpon HOM05D004878 ORTHO05D006497 5.0e-22 108.2 126 52.4
EL10Ac5g11219 Beta vulgaris HOM05D004878 ORTHO05D006497 1.1e-21 107.1 109 56.9
Ah.02g114390 Amaranthus hybridus HOM05D004878 ORTHO05D006497 1.4e-21 106.7 109 56.9
Thhalv10009483m.g Eutrema salsugineum HOM05D004878 ORTHO05D006497 1.4e-21 106.7 88 65.9
Gohir.A05G144800 Gossypium hirsutum HOM05D004878 ORTHO05D006497 2.5e-21 105.9 91 63.7
Mapoly0024s0023 Marchantia polymorpha HOM05D004878 ORTHO05D006497 4.2e-21 105.1 109 56.9
Gorai.009G151200 Gossypium raimondii HOM05D004878 ORTHO05D006497 5.5e-21 104.8 109 56.9
Gohir.D05G147200 Gossypium hirsutum HOM05D004878 ORTHO05D006497 1.6e-20 103.2 91 62.6
SEGI_01553 Sequoiadendron giganteum HOM05D004878 ORTHO05D006497 1.6e-20 103.2 88 60.2
Hund02535 Selenicereus undatus HOM05D004878 ORTHO05D006497 4.6e-20 101.7 88 61.4
Hma1.2p1_0185F.1_g081360 Hydrangea macrophylla HOM05D004878 ORTHO05D006497 7.9e-20 100.9 72 73.6
CBR_g30341 Chara braunii HOM05D004878 ORTHO05D006497 5.1e-19 98.2 88 60.2
SMO351G0334 Selaginella moellendorffii HOM05D004878 ORTHO05D006497 1.5e-18 96.7 88 59.1
CiPaw.09G078300 Carya illinoinensis HOM05D004878 ORTHO05D006497 5.7e-18 94.7 72 68.1
Pp3c21_18140 Physcomitrium patens HOM05D004878 ORTHO05D006497 5.7e-18 94.7 88 56.8
CSS0045199 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 7.4e-18 94.4 51 88.2
HPP92_027574 Vanilla planifolia HOM05D004878 ORTHO05D006497 9.7e-18 94.0 74 63.5
Prupe.4G110600 Prunus persica HOM05D004878 ORTHO05D006497 1.8e-16 89.7 83 60.2
AagrBONN_evm.TU.Sc2ySwM_228.275 Anthoceros agrestis HOM05D004878 ORTHO05D006497 4.1e-16 88.6 119 47.1
Cre02.g109600 Chlamydomonas reinhardtii HOM05D004878 ORTHO05D006497 6.9e-16 87.8 88 50.0
MD05G1355100 Malus domestica HOM05D004878 ORTHO05D006497 1.2e-15 87.0 72 63.9
RcHm_v2.0_Chr5g0019951 Rosa chinensis HOM05D004878 ORTHO05D006497 1.7e-14 83.2 82 59.8
PRCOL_00002057 Prasinoderma coloniale HOM05D004878 ORTHO05D006497 1.4e-13 80.1 75 53.3


User provided reference genes

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