Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036245 Camellia sinensis var. sinensis HOM05D001232 ORTHO05D001073 3.3e-59 231.5 115 100.0
CSS0045061 Camellia sinensis var. sinensis HOM05D001232 ORTHO05D001073 2.1e-45 185.7 94 98.9
Dinv16008 Davidia involucrata HOM05D001232 ORTHO05D001073 2.5e-22 109.0 100 69.0
Dinv42599 Davidia involucrata HOM05D001232 ORTHO05D001073 5.5e-14 81.3 94 50.0
TAR376G1122 Trochodendron aralioides HOM05D001232 ORTHO05D001073 2.3e-12 75.9 100 51.0
MSTRG.5288 Avicennia marina HOM05D001232 ORTHO05D001073 5.1e-12 74.7 79 58.2
CSS0050427 Camellia sinensis var. sinensis HOM05D001232 ORTHO05D001073 6.7e-12 74.3 107 43.9
CANSAT25G3666 Cannabis sativa HOM05D001232 ORTHO05D001073 8.8e-12 73.9 99 49.5
CiPaw.07G163700 Carya illinoinensis HOM05D001232 ORTHO05D001073 8.8e-12 73.9 104 49.0
Nitab4.5_0001636g0100 Nicotiana tabacum HOM05D001232 ORTHO05D001073 2.0e-11 72.8 94 54.3
Nitab4.5_0001773g0050 Nicotiana tabacum HOM05D001232 ORTHO05D001073 2.0e-11 72.8 94 52.1
Dinv44872 Davidia involucrata HOM05D001232 ORTHO05D001073 2.5e-11 72.4 101 48.5
Haze_10500 Corylus avellana HOM05D001232 ORTHO05D001073 4.3e-11 71.6 95 50.5
Sed0027362 Sechium edule HOM05D001232 ORTHO05D001073 5.7e-11 71.2 99 46.5
Nn5g29834 Nelumbo nucifera HOM05D001232 ORTHO05D001073 7.4e-11 70.9 105 49.5
Haze_22480 Corylus avellana HOM05D001232 ORTHO05D001073 9.7e-11 70.5 105 48.6
Hma1.2p1_0010F.1_g006570 Hydrangea macrophylla HOM05D001232 ORTHO05D001073 9.7e-11 70.5 97 49.5
PGSC0003DMG400010684 Solanum tuberosum HOM05D001232 ORTHO05D001073 9.7e-11 70.5 89 56.2
Cpa.g.sc3189.2 Carica papaya HOM05D001232 ORTHO05D001073 1.3e-10 70.1 96 47.9
CAN.G504.85 Capsicum annuum HOM05D001232 ORTHO05D001073 2.2e-10 69.3 91 52.7
MELO3C011078.2 Cucumis melo HOM05D001232 ORTHO05D001073 2.2e-10 69.3 102 47.1
FAN18G0814 Fragaria x ananassa HOM05D001232 ORTHO05D001073 2.2e-10 69.3 102 47.1
CiPaw.06G158500 Carya illinoinensis HOM05D001232 ORTHO05D001073 2.8e-10 68.9 96 51.0
FvH4_5g34490 Fragaria vesca HOM05D001232 ORTHO05D001073 2.8e-10 68.9 102 47.1
Actinidia10272 Actinidia chinensis HOM05D001232 ORTHO05D001073 3.7e-10 68.6 98 44.9
Cfa013810 Carpinus fangiana HOM05D001232 ORTHO05D001073 3.7e-10 68.6 108 45.4
Duzib093G0806 Durio zibethinus HOM05D001232 ORTHO05D001073 3.7e-10 68.6 98 49.0
MD15G1387800 Malus domestica HOM05D001232 ORTHO05D001073 4.8e-10 68.2 104 50.0
ClCG08G011590 Citrullus lanatus HOM05D001232 ORTHO05D001073 6.3e-10 67.8 108 44.4
Cc02_g20800 Coffea canephora HOM05D001232 ORTHO05D001073 6.3e-10 67.8 81 51.9
Nn1g05619 Nelumbo nucifera HOM05D001232 ORTHO05D001073 6.3e-10 67.8 99 48.5
GSVIVG01012522001 Vitis vinifera HOM05D001232 ORTHO05D001073 6.3e-10 67.8 98 44.9
Manes.05G189500 Manihot esculenta HOM05D001232 ORTHO05D001073 8.2e-10 67.4 99 48.5
Prupe.1G534400 Prunus persica HOM05D001232 ORTHO05D001073 8.2e-10 67.4 103 47.6
TAR628G0070 Trochodendron aralioides HOM05D001232 ORTHO05D001073 8.2e-10 67.4 97 46.4
CANSAT54G0029 Cannabis sativa HOM05D001232 ORTHO05D001073 1.4e-09 66.6 105 42.9
CsaV3_2G030170 Cucumis sativus L. HOM05D001232 ORTHO05D001073 1.4e-09 66.6 102 45.1
Gohir.A06G031200 Gossypium hirsutum HOM05D001232 ORTHO05D001073 1.8e-09 66.2 100 49.0
Manes.18G056400 Manihot esculenta HOM05D001232 ORTHO05D001073 2.4e-09 65.9 104 46.2
Gorai.010G033400 Gossypium raimondii HOM05D001232 ORTHO05D001073 4.1e-09 65.1 100 48.0
TAR625G0997 Trochodendron aralioides HOM05D001232 ORTHO05D001073 4.1e-09 65.1 98 45.9
Gohir.D06G030400 Gossypium hirsutum HOM05D001232 ORTHO05D001073 5.3e-09 64.7 100 48.0
Duzib041G0009 Durio zibethinus HOM05D001232 ORTHO05D001073 6.9e-09 64.3 99 47.5
Solyc01g106040.3 Solanum lycopersicum HOM05D001232 ORTHO05D001073 9.1e-09 63.9 81 56.8
Sopen01g048420 Solanum pennellii HOM05D001232 ORTHO05D001073 9.1e-09 63.9 81 56.8
Migut.N01100 Erythranthe guttata HOM05D001232 ORTHO05D001073 2.0e-08 62.8 69 53.6
Sabra02G0087300 Salix brachista HOM05D001232 ORTHO05D001073 2.6e-08 62.4 104 43.3
QL11p025524 Quercus lobata HOM05D001232 ORTHO05D001073 3.4e-08 62.0 110 38.2
TWI56G0092 Tripterygium wilfordii HOM05D001232 ORTHO05D001073 3.4e-08 62.0 94 43.6
Thecc.08G073000 Theobroma cacao HOM05D001232 ORTHO05D001073 4.5e-08 61.6 106 43.4
Atru.chr13.990 Acer truncatum HOM05D001232 ORTHO05D001073 5.9e-08 61.2 115 42.6
Ciclev10001533m.g Citrus clementina HOM05D001232 ORTHO05D001073 5.9e-08 61.2 116 40.5
Potri.005G152500 Populus trichocarpa HOM05D001232 ORTHO05D001073 5.9e-08 61.2 101 45.5
Prupe.8G071300 Prunus persica HOM05D001232 ORTHO05D001073 1.3e-07 60.1 95 45.3
MD08G1200900 Malus domestica HOM05D001232 ORTHO05D001073 1.7e-07 59.7 106 43.4
Cfa004846 Carpinus fangiana HOM05D001232 ORTHO05D001073 2.2e-07 59.3 80 52.5
CiPaw.08G056900 Carya illinoinensis HOM05D001232 ORTHO05D001073 5.0e-07 58.2 99 46.5
FAN04G2961 Fragaria x ananassa HOM05D001232 ORTHO05D001073 5.0e-07 58.2 94 41.5
Nitab4.5_0000131g0070 Nicotiana tabacum HOM05D001232 ORTHO05D001073 5.0e-07 58.2 100 40.0
COL.COLO4_35268 Corchorus olitorius HOM05D001232 ORTHO05D001073 8.5e-07 57.4 102 44.1
Solyc04g076530.3 Solanum lycopersicum HOM05D001232 ORTHO05D001073 1.4e-06 56.6 112 39.3
Lj1g0022560 Lotus japonicus HOM05D001232 ORTHO05D001073 1.9e-06 56.2 95 44.2
Ciclev10028671m.g Citrus clementina HOM05D001232 ORTHO05D001073 2.5e-06 55.8 100 38.0
Phvul.009G035300 Phaseolus vulgaris HOM05D001232 ORTHO05D001073 2.5e-06 55.8 94 43.6
Gorai.002G138300 Gossypium raimondii HOM05D001232 ORTHO05D001073 4.2e-06 55.1 110 40.0
VMungo1309G0338 Vigna mungo HOM05D001232 ORTHO05D001073 4.2e-06 55.1 94 43.6
Gohir.A03G177600 Gossypium hirsutum HOM05D001232 ORTHO05D001073 5.5e-06 54.7 94 42.6
Gorai.005G226000 Gossypium raimondii HOM05D001232 ORTHO05D001073 5.5e-06 54.7 94 42.6
CSS0016802 Camellia sinensis var. sinensis HOM05D001232 ORTHO05D001073 7.2e-06 54.3 112 40.2
Glyma.06G098000 Glycine max HOM05D001232 ORTHO05D001073 7.2e-06 54.3 98 38.8
Gohir.D02G201300 Gossypium hirsutum HOM05D001232 ORTHO05D001073 7.2e-06 54.3 94 42.6
Oeu029682.2 Olea europaea HOM05D001232 ORTHO05D001073 7.2e-06 54.3 65 52.3
Psat5g047080 Pisum sativum HOM05D001232 ORTHO05D001073 7.2e-06 54.3 95 44.2
Gohir.A01G126000 Gossypium hirsutum HOM05D001232 ORTHO05D001073 9.4e-06 53.9 110 40.0
Sabra17G0028800 Salix brachista HOM05D001232 ORTHO05D001073 9.4e-06 53.9 88 40.9
Hund26820 Selenicereus undatus HOM05D001232 ORTHO05D001073 9.4e-06 53.9 107 41.1
THA.LOC104799857 Tarenaya hassleriana HOM05D001232 ORTHO05D001073 9.4e-06 53.9 76 48.7


User provided reference genes

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