Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.1e-89 332.4 173 100.0
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.3e-88 329.7 173 98.8
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 4.1e-53 211.8 143 79.7
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 1.2e-52 210.3 126 86.5
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 2.2e-51 206.1 128 83.6
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 1.1e-47 193.7 125 79.2
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 2.5e-47 192.6 128 76.6
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 4.3e-47 191.8 120 81.7
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 4.3e-47 191.8 128 75.0
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 9.7e-47 190.7 140 71.4
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 2.2e-46 189.5 127 77.2
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 2.2e-46 189.5 120 80.0
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 2.8e-46 189.1 125 77.6
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 2.8e-46 189.1 120 79.2
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 1.1e-45 187.2 125 78.4
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 1.4e-45 186.8 128 74.2
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 1.4e-45 186.8 143 67.8
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 1.8e-45 186.4 144 69.4
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 1.8e-45 186.4 128 76.6
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 4.1e-45 185.3 125 76.8
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 5.3e-45 184.9 125 76.0
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 6.9e-45 184.5 130 72.3
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 9.0e-45 184.1 128 74.2
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 5.9e-44 181.4 130 70.8
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 1.7e-43 179.9 120 74.2
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 1.7e-43 179.9 179 57.0
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.7e-43 179.9 120 75.0
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.2e-43 179.5 143 67.8
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 3.8e-43 178.7 127 72.4
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 3.8e-43 178.7 159 60.4
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 5.0e-43 178.3 128 71.9
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 6.5e-43 177.9 130 67.7
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 6.5e-43 177.9 130 69.2
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 8.5e-43 177.6 120 76.7
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 1.9e-42 176.4 125 72.8
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 1.9e-42 176.4 127 72.4
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 3.2e-42 175.6 143 65.0
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 3.2e-42 175.6 128 69.5
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 7.2e-42 174.5 125 73.6
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 9.4e-42 174.1 125 72.0
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 9.4e-42 174.1 129 69.8
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 1.2e-41 173.7 130 68.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 2.1e-41 172.9 130 70.8
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 2.1e-41 172.9 125 70.4
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 2.7e-41 172.6 128 70.3
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 2.7e-41 172.6 125 72.0
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 7.9e-41 171.0 125 71.2
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 1.0e-40 170.6 130 68.5
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 1.4e-40 170.2 108 78.7
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 8.8e-40 167.5 148 62.8
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.5e-39 166.8 165 58.2
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 2.0e-39 166.4 140 64.3
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 2.5e-39 166.0 142 64.8
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 4.3e-39 165.2 149 62.4
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 5.7e-39 164.9 120 70.8
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 7.4e-39 164.5 130 66.9
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 7.4e-39 164.5 142 64.8
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 1.3e-38 163.7 130 66.2
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 2.2e-38 162.9 120 70.8
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 2.8e-38 162.5 130 66.9
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 4.8e-38 161.8 120 69.2
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 5.3e-37 158.3 120 68.3
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 9.1e-37 157.5 120 67.5
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 1.0e-35 154.1 120 65.0
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 1.3e-35 153.7 89 84.3
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.9e-34 149.8 143 58.0
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 1.4e-32 143.7 120 60.0
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 2.3e-32 142.9 130 58.5
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 3.0e-32 142.5 132 59.8
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.3e-30 137.1 120 60.0
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 2.2e-30 136.3 89 74.2
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 9.1e-29 131.0 120 54.2
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 9.1e-29 131.0 121 56.2
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 5.9e-28 128.3 109 62.4
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 7.7e-28 127.9 88 70.5
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 7.2e-26 121.3 130 56.9
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 2.1e-25 119.8 120 49.2
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 4.0e-24 115.5 120 53.3
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 1.5e-23 113.6 96 64.6
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 6.3e-22 108.2 120 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.1e-21 107.5 120 52.5
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 1.8e-21 106.7 125 49.6
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 4.1e-21 105.5 77 74.0
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 2.0e-20 103.2 56 87.5
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 3.2e-18 95.9 119 49.6
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 3.1e-13 79.3 55 78.2
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 5.9e-12 75.1 85 52.9
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 7.7e-12 74.7 47 85.1
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 6.5e-11 71.6 85 51.8
Haze_15793 Corylus avellana HOM05D004910 ORTHO05D006864 2.6e-07 59.7 36 77.8


User provided reference genes

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