Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.7e-244 848.6 520 100.0
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.5e-242 842.0 520 99.6
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 8.9e-147 524.6 527 58.8
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 8.6e-142 508.1 523 56.8
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 4.0e-131 472.6 504 54.8
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.4e-120 437.6 521 51.2
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 1.9e-117 427.2 663 44.5
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.2e-113 413.7 424 56.6
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 5.0e-97 359.4 389 54.8
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 8.5e-97 358.6 557 42.4
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.2e-95 354.8 461 50.5
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 3.6e-95 353.2 558 42.5
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 3.3e-93 346.7 538 44.4
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.2e-89 334.0 423 48.5
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.9e-89 333.6 425 48.5
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 5.5e-88 329.3 524 43.5
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.2e-87 328.2 520 43.1
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.7e-87 327.0 534 40.6
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.0e-86 325.1 522 44.4
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 3.0e-86 323.6 524 42.4
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.1e-85 321.6 517 39.8
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.5e-85 321.2 449 45.0
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 2.0e-85 320.9 530 41.3
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 9.7e-85 318.5 604 38.9
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.3e-84 318.2 418 48.3
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 1.1e-83 315.1 531 41.4
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 2.6e-82 310.5 532 41.4
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 4.5e-82 309.7 529 40.6
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 7.7e-82 308.9 530 41.1
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 1.7e-81 307.8 343 54.8
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.5e-80 304.7 549 47.2
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 9.4e-80 302.0 526 40.1
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 3.6e-79 300.1 518 39.0
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.0e-78 298.5 527 40.8
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.0e-78 298.5 519 39.9
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.8e-78 297.7 552 38.8
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.2e-77 295.0 560 39.3
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 2.0e-77 294.3 531 40.5
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.4e-77 293.1 487 41.7
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.8e-76 289.7 518 40.5
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 2.0e-74 284.3 434 43.8
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 1.3e-73 281.6 555 36.6
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 2.2e-73 280.8 325 50.5
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 5.0e-73 279.6 433 42.0
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.1e-72 278.5 443 44.0
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.2e-72 276.6 487 40.9
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.6e-71 274.6 427 42.4
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 3.6e-71 273.5 543 37.8
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.7e-68 264.6 432 45.1
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.8e-68 263.8 438 40.0
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 2.8e-68 263.8 380 42.6
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.4e-67 261.5 462 40.9
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 7.0e-67 259.2 425 42.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.7e-66 257.3 509 36.3
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 3.5e-66 256.9 531 39.7
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 5.9e-66 256.1 548 39.2
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.5e-64 251.5 464 40.1
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 3.2e-64 250.4 382 43.2
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 5.5e-64 249.6 554 39.5
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.2e-63 248.4 371 44.7
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.2e-63 248.4 445 39.6
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.8e-63 247.3 358 43.6
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 6.1e-63 246.1 505 38.2
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.4e-62 245.0 360 43.9
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.3e-62 244.2 606 33.5
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 6.8e-62 242.7 411 40.4
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 8.8e-62 242.3 436 42.2
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.2e-61 241.9 558 34.8
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 2.0e-61 241.1 520 36.2
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 3.4e-61 240.4 469 38.8
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 1.7e-60 238.0 575 34.4
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 6.3e-60 236.1 459 41.2
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.4e-59 235.0 522 34.9
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.5e-58 230.3 423 38.3
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 3.5e-58 230.3 527 34.7
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 3.5e-58 230.3 504 36.1
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 7.8e-58 229.2 420 37.6
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 2.3e-57 227.6 580 31.7
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 3.3e-56 223.8 545 36.0
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 9.5e-56 222.2 504 38.7
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 2.8e-55 220.7 392 40.1
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 6.1e-55 219.5 514 34.4
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 7.5e-53 212.6 451 33.5
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.7e-52 211.5 412 37.1
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.7e-52 210.3 460 36.1
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 3.7e-52 210.3 346 41.0
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 3.2e-51 207.2 505 36.6
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 7.0e-51 206.1 567 34.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 7.0e-51 206.1 488 34.4
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.3e-49 201.1 465 36.1
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.0e-49 200.7 460 35.0
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.3e-48 197.2 571 30.6
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 4.7e-47 193.4 427 34.4
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.3e-46 191.0 467 36.2
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 4.4e-45 186.8 497 35.4
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.3e-44 185.3 371 37.7
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 9.2e-43 179.1 374 36.1
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 5.0e-41 173.3 208 49.0
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.1e-40 172.2 526 31.6
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.1e-40 172.2 526 31.6
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 7.3e-40 169.5 527 33.2
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 1.2e-39 168.7 526 31.7
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 4.7e-39 166.8 527 29.4
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 1.5e-37 161.8 412 36.4
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 3.4e-37 160.6 399 33.1
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 4.4e-37 160.2 527 30.7
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.7e-36 158.3 223 44.8
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.2e-35 154.1 412 31.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 9.2e-35 152.5 579 28.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.7e-33 148.3 489 30.1
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 4.3e-32 143.7 533 30.0
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 6.2e-31 139.8 354 36.4
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 8.4e-28 129.4 222 38.3
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 4.0e-22 110.5 544 25.7
Rhsim03G0191000 Rhododendron simsii HOM05D006489 ORTHO05D007556 3.1e-14 84.3 201 36.8
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 9.0e-14 82.8 73 54.8
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 9.9e-13 79.3 60 63.3
Rhsim02G0082000 Rhododendron simsii HOM05D000432 ORTHO05D000320 6.9e-06 56.6 156 35.9


User provided reference genes

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