Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036226 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 4.3e-40 167.5 84 100.0
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 3.6e-15 84.7 49 85.7
Actinidia19627 Actinidia chinensis HOM05D003319 ORTHO05D003739 5.2e-14 80.9 49 81.6
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 6.8e-14 80.5 66 63.6
Actinidia19629 Actinidia chinensis HOM05D003319 ORTHO05D003739 9.9e-13 76.6 49 75.5
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 4.9e-12 74.3 67 58.2
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 1.4e-11 72.8 50 72.0
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 2.4e-11 72.0 54 74.1
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.1e-11 71.2 57 68.4
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 4.1e-11 71.2 56 71.4
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 5.4e-11 70.9 53 71.7
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 3.5e-10 68.2 53 66.0
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 3.5e-10 68.2 51 64.7
Lj4A717G27 Lonicera japonica HOM05D003319 ORTHO05D003739 3.5e-10 68.2 55 65.5
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 3.5e-10 68.2 55 65.5
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.3e-09 66.2 48 72.9
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 3.9e-09 64.7 59 62.7
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 5.1e-09 64.3 56 60.7
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 1.5e-08 62.8 55 63.6
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 3.3e-08 61.6 53 64.2
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 4.3e-08 61.2 53 66.0
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 5.6e-08 60.8 60 56.7
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 1.2e-07 59.7 51 58.8
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 1.6e-07 59.3 56 62.5
Gohir.A01G126500 Gossypium hirsutum HOM05D003319 ORTHO05D003739 1.6e-07 59.3 56 60.7
Gohir.D01G114100 Gossypium hirsutum HOM05D003319 ORTHO05D003739 1.6e-07 59.3 56 60.7
Gorai.002G139000 Gossypium raimondii HOM05D003319 ORTHO05D003739 1.6e-07 59.3 56 60.7
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 2.1e-07 58.9 53 60.4
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 3.6e-07 58.2 56 60.7
DCAR_012853 Daucus carota HOM05D003319 ORTHO05D003739 4.7e-07 57.8 68 48.5
PSO170G3999 Papaver somniferum HOM05D003319 ORTHO05D003739 4.7e-07 57.8 54 61.1
PSO210G3859 Papaver somniferum HOM05D003319 ORTHO05D003739 4.7e-07 57.8 54 61.1
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 6.2e-07 57.4 54 61.1
DCAR_012854 Daucus carota HOM05D003319 ORTHO05D003739 1.1e-06 56.6 72 47.2
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 1.1e-06 56.6 51 56.9
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 1.8e-06 55.8 51 54.9
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 4.0e-06 54.7 61 50.8
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 5.2e-06 54.3 57 52.6
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 5.2e-06 54.3 48 66.7
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 5.2e-06 54.3 55 56.4
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 5.2e-06 54.3 51 62.7
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 6.9e-06 53.9 48 66.7
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 9.0e-06 53.5 61 49.2
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 9.0e-06 53.5 50 64.0
HanXRQChr15g0484821 Helianthus annuus HOM05D003319 ORTHO05D003739 9.0e-06 53.5 52 53.8


User provided reference genes

Program Settings