Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 7.0e-243 843.6 441 100.0
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 3.4e-181 638.6 454 76.0
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 3.7e-175 618.6 453 71.7
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 8.2e-175 617.5 446 75.1
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 2.2e-143 513.1 443 62.8
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 7.7e-141 504.6 452 62.2
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 2.9e-140 502.7 456 60.5
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 5.7e-136 488.4 458 57.9
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 6.3e-135 485.0 443 59.1
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 2.2e-132 476.5 457 57.3
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.5e-131 473.8 454 58.4
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 1.9e-131 473.4 439 59.5
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 3.2e-131 472.6 453 55.6
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 1.8e-129 466.8 440 56.4
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 6.8e-129 464.9 455 55.8
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 1.5e-128 463.8 455 58.0
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.6e-128 463.0 445 57.1
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 1.3e-127 460.7 445 56.4
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 1.3e-127 460.7 455 57.6
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 8.3e-127 458.0 455 57.6
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 3.1e-126 456.1 456 53.7
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 5.4e-126 455.3 444 56.5
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 1.6e-125 453.8 455 57.4
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 4.5e-125 452.2 444 56.8
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 1.3e-124 450.7 442 56.3
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 3.8e-124 449.1 456 52.9
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 6.6e-124 448.4 444 55.2
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 4.2e-123 445.7 453 54.5
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 5.5e-123 445.3 442 55.9
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 9.5e-123 444.5 462 55.2
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 1.2e-122 444.1 456 54.2
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 8.0e-122 441.4 455 54.7
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 1.0e-121 441.0 449 55.5
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 1.0e-121 441.0 457 54.9
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.4e-121 440.7 457 54.9
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 2.3e-121 439.9 446 54.9
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 5.2e-121 438.7 458 54.1
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 8.9e-121 438.0 442 56.6
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.0e-120 436.8 460 53.9
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 1.3e-119 434.1 437 56.5
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.7e-119 433.7 453 55.4
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 2.8e-119 433.0 445 53.0
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 3.7e-119 432.6 457 53.4
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.1e-118 431.0 445 54.4
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 2.4e-118 429.9 459 54.7
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 1.6e-117 427.2 456 52.9
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 1.6e-117 427.2 445 53.9
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 7.8e-117 424.9 457 53.4
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.5e-115 420.6 443 55.1
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.9e-115 420.2 444 53.8
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 6.1e-114 415.2 446 53.6
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.0e-113 414.5 457 52.3
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 4.0e-113 412.5 457 53.4
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 3.4e-112 409.5 455 53.0
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 7.5e-112 408.3 291 73.5
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 9.8e-112 407.9 433 52.9
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 2.2e-111 406.8 442 52.7
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 3.7e-111 406.0 430 53.0
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.1e-110 404.4 451 51.2
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 1.0e-108 397.9 449 51.0
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 1.1e-107 394.4 456 51.5
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 3.3e-107 392.9 488 47.1
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.6e-107 392.1 420 51.9
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 7.3e-107 391.7 454 49.6
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 6.2e-106 388.7 445 50.3
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.0e-104 383.6 436 49.3
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 4.4e-104 382.5 393 53.7
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 8.3e-103 378.3 442 50.2
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 1.6e-101 374.0 447 49.2
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 3.3e-99 366.3 442 47.7
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 1.6e-98 364.0 435 48.3
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 8.9e-97 358.2 440 48.0
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 1.7e-95 354.0 433 47.3
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 1.7e-95 354.0 441 47.2
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 2.9e-95 353.2 444 46.6
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.7e-95 352.8 440 47.0
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 8.3e-95 351.7 434 48.6
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 2.4e-94 350.1 441 46.3
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 7.1e-94 348.6 444 46.4
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 7.1e-94 348.6 441 46.3
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 7.1e-94 348.6 441 46.3
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 2.7e-93 346.7 441 46.5
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 8.1e-90 335.1 441 45.1
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.4e-89 334.3 397 48.9
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.4e-89 334.3 446 45.5
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.8e-89 334.0 441 42.0
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 4.0e-89 332.8 428 47.7
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 6.8e-89 332.0 430 46.3
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 1.9e-86 323.9 365 49.3
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 4.2e-86 322.8 360 51.1
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.1e-85 320.5 360 50.8
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 3.6e-82 309.7 443 41.5
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.1e-77 293.9 350 47.7
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 7.9e-77 292.0 357 46.5
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 9.0e-73 278.5 318 48.1
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 6.0e-69 265.8 287 53.3
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 3.7e-66 256.5 207 64.3
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.8e-57 227.6 295 46.1
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.2e-53 214.9 319 42.9
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 4.6e-53 213.0 442 32.6
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.7e-45 187.2 214 48.1
Sabra03G0029200 Salix brachista HOM05D002451 ORTHO05D005601 2.0e-43 181.0 193 51.3
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 3.7e-42 176.8 471 29.3
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 4.1e-41 173.3 476 30.3
HPP92_007773 Vanilla planifolia HOM05D002451 ORTHO05D005601 2.7e-37 160.6 165 48.5
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 1.8e-36 157.9 433 29.3
TAR624G0921 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.3e-33 146.4 145 54.5
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 7.0e-33 146.0 355 31.3
unitig_88.g27602 Utricularia gibba HOM05D002451 ORTHO05D005601 1.5e-32 144.8 132 58.3
SEGI_23779 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 2.3e-28 131.0 119 54.6
EL10Ac9g21205 Beta vulgaris HOM05D002451 ORTHO05D005601 4.4e-27 126.7 178 42.7
Aa31LG9G10320 Aethionema arabicum HOM05D002451 ORTHO05D005601 9.7e-27 125.6 122 53.3
Lj1g0017121 Lotus japonicus HOM05D002451 ORTHO05D005601 2.9e-23 114.0 93 62.4
HPP92_007804 Vanilla planifolia HOM05D002451 ORTHO05D005601 9.4e-22 109.0 168 38.7
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 9.8e-19 99.0 285 27.7
Zm00001eb029900 Zea mays HOM05D002451 ORTHO05D005601 3.5e-16 90.5 100 46.0
Peaxi162Scf00038g01031 Petunia axillaris HOM05D002451 ORTHO05D005601 2.9e-15 87.4 55 78.2
TPR.G18835 Trifolium pratense HOM05D002451 ORTHO05D005601 1.9e-14 84.7 62 66.1
TPR.G18837 Trifolium pratense HOM05D002451 ORTHO05D005601 1.3e-10 72.0 82 50.0
Zm00001eb105150 Zea mays HOM05D002451 ORTHO05D005601 5.6e-06 56.6 46 54.3


User provided reference genes

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