Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 1.5e-146 523.1 311 100.0
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 9.6e-122 440.7 255 87.1
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 2.8e-121 439.1 257 86.4
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 3.8e-118 428.7 256 85.2
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 1.2e-116 423.7 257 82.5
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 3.0e-115 419.1 252 82.5
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 3.9e-115 418.7 258 81.0
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 2.5e-114 416.0 254 81.9
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 3.7e-113 412.1 250 82.8
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 3.7e-113 412.1 250 82.8
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 3.7e-113 412.1 259 79.9
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 4.8e-113 411.8 255 82.7
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 8.5e-110 401.0 256 77.7
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 3.2e-109 399.1 257 78.2
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 4.2e-109 398.7 247 82.2
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 4.2e-109 398.7 247 81.8
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 5.5e-109 398.3 251 80.1
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 3.9e-107 392.1 254 79.5
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 5.1e-107 391.7 255 76.5
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 3.3e-106 389.0 247 80.6
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 4.3e-106 388.7 250 78.0
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 5.7e-106 388.3 256 75.8
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 1.3e-105 387.1 260 75.0
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 1.3e-105 387.1 260 75.0
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 2.2e-105 386.3 251 77.7
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 2.8e-105 386.0 251 76.9
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 6.3e-105 384.8 253 77.1
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 1.1e-104 384.0 250 77.2
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.1e-104 384.0 258 74.0
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.8e-104 383.3 250 76.8
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 3.1e-104 382.5 251 77.3
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 3.1e-104 382.5 258 74.0
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 4.1e-104 382.1 249 78.3
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 5.3e-104 381.7 251 78.5
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 6.9e-104 381.3 254 76.0
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.5e-103 380.2 254 76.8
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 7.7e-103 377.9 255 73.7
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.0e-102 377.5 255 74.1
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 2.9e-102 375.9 248 78.6
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 3.8e-102 375.6 253 76.3
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 2.5e-101 372.9 293 66.9
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 3.2e-101 372.5 249 76.3
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 5.5e-101 371.7 255 74.9
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 7.2e-101 371.3 252 75.8
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 7.2e-101 371.3 253 73.9
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 9.4e-101 370.9 256 71.5
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 9.4e-101 370.9 239 77.4
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.7e-100 369.4 239 77.0
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.0e-99 367.5 258 75.6
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 1.0e-99 367.5 244 77.5
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 2.3e-99 366.3 252 72.6
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.3e-99 366.3 239 79.1
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 3.0e-99 365.9 252 72.6
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 3.0e-99 365.9 249 77.1
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 3.0e-99 365.9 257 72.4
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 1.1e-98 364.0 258 74.0
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.5e-98 363.6 247 72.9
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 2.0e-98 363.2 239 77.4
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 3.3e-98 362.5 239 79.1
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 9.7e-98 360.9 255 72.9
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 9.7e-98 360.9 254 70.1
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 6.3e-97 358.2 225 80.0
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 1.1e-96 357.5 254 70.9
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 9.1e-96 354.4 231 76.2
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 1.2e-95 354.0 254 70.5
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 2.6e-95 352.8 261 69.3
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 3.5e-95 352.4 239 76.2
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 7.7e-95 351.3 255 68.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.0e-94 350.9 237 77.2
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.3e-94 350.5 255 70.6
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 2.9e-94 349.4 255 67.8
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 5.0e-94 348.6 296 61.8
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 2.5e-93 346.3 257 66.9
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 3.2e-93 345.9 297 59.9
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 5.5e-93 345.1 259 68.0
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.2e-92 344.0 235 74.9
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 2.1e-92 343.2 251 68.9
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 6.1e-92 341.7 259 66.4
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 6.1e-92 341.7 221 79.2
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 8.0e-92 341.3 227 76.7
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 1.0e-91 340.9 259 66.4
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 3.0e-91 339.3 255 67.1
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 3.9e-91 339.0 259 66.0
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 3.9e-91 339.0 252 67.1
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.5e-90 337.0 259 66.0
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 2.0e-90 336.7 247 68.0
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 4.4e-90 335.5 255 66.3
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 8.2e-89 331.3 249 65.9
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 2.4e-88 329.7 246 65.9
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 5.3e-88 328.6 259 64.9
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.7e-86 323.6 228 70.2
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 3.8e-86 322.4 255 65.5
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 5.5e-85 318.5 328 57.3
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 9.4e-85 317.8 378 48.4
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 6.3e-81 305.1 231 69.3
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 9.1e-80 301.2 277 58.5
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 5.9e-79 298.5 188 80.3
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 7.7e-79 298.1 189 78.8
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 2.5e-77 293.1 198 72.7
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 4.0e-75 285.8 190 78.4
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 4.9e-73 278.9 250 54.0
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.1e-72 277.7 199 70.4
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 9.1e-72 274.6 243 55.1
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.5e-69 267.3 242 55.8
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 7.2e-69 265.0 211 61.6
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 2.0e-66 256.9 252 56.0
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 4.1e-64 249.2 256 53.5
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 7.0e-64 248.4 258 54.3
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 7.3e-61 238.4 161 75.8
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 3.6e-60 236.1 233 52.8
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 7.5e-58 228.4 270 44.8
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.7e-55 219.9 152 72.4
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.3e-54 216.9 174 66.1
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.6e-52 210.7 167 68.9
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 8.1e-52 208.4 245 46.1
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 4.1e-48 196.1 142 66.2
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 2.1e-47 193.7 245 44.9
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 1.6e-44 184.1 248 43.1
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 1.3e-41 174.5 119 73.1
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 5.4e-40 169.1 206 47.6
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 7.8e-31 138.7 162 48.1
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 1.4e-24 117.9 79 70.9
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.1e-19 101.7 80 58.8
PGSC0003DMG400030254 Solanum tuberosum HOM05D000561 ORTHO05D008162 7.9e-07 58.9 36 80.6


User provided reference genes

Program Settings