Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036167 Camellia sinensis var. sinensis HOM05D048853 ORTHO05D109450 1.3e-31 139.0 66 100.0
CSS0013892 Camellia sinensis var. sinensis HOM05D048853 ORTHO05D111948 1.1e-22 109.4 66 83.3
DCAR_022902 Daucus carota HOM05D000961 ORTHO05D000841 7.5e-08 60.1 38 71.1
CSS0022528 Camellia sinensis var. sinensis HOM05D000961 ORTHO05D000841 4.9e-07 57.4 31 83.9
ATR0332G113 Amborella trichopoda HOM05D000961 ORTHO05D000841 1.1e-06 56.2 31 80.6
ATR0743G173 Amborella trichopoda HOM05D000961 ORTHO05D000841 1.1e-06 56.2 31 80.6
Sc25g0002380 Simmondsia chinensis HOM05D000961 ORTHO05D000841 1.1e-06 56.2 31 80.6
TAR362G0468 Trochodendron aralioides HOM05D000961 ORTHO05D000841 1.1e-06 56.2 31 80.6
GSVIVG01010751001 Vitis vinifera HOM05D000961 ORTHO05D000841 1.1e-06 56.2 31 80.6
Cc03_g13250 Coffea canephora HOM05D000961 ORTHO05D000841 1.9e-06 55.5 31 77.4
Dinv22728 Davidia involucrata HOM05D000961 ORTHO05D000841 1.9e-06 55.5 31 77.4
Dinv44194 Davidia involucrata HOM05D000961 ORTHO05D000841 1.9e-06 55.5 31 77.4
Prupe.7G063500 Prunus persica HOM05D000961 ORTHO05D000841 1.9e-06 55.5 32 71.9
QL04p008116 Quercus lobata HOM05D000961 ORTHO05D000841 1.9e-06 55.5 32 78.1
QL04p008531 Quercus lobata HOM05D000961 ORTHO05D000841 1.9e-06 55.5 32 78.1
Cpa.g.sc9.268 Carica papaya HOM05D000961 ORTHO05D000841 2.4e-06 55.1 31 77.4
COL.COLO4_07657 Corchorus olitorius HOM05D000961 ORTHO05D000841 2.4e-06 55.1 31 77.4
CANSAT78G2526 Cannabis sativa HOM05D000961 ORTHO05D000841 3.2e-06 54.7 31 71.0
MELO3C011652.2 Cucumis melo HOM05D000961 ORTHO05D000841 3.2e-06 54.7 35 65.7
Nitab4.5_0004046g0010 Nicotiana tabacum HOM05D000961 ORTHO05D000841 3.2e-06 54.7 31 77.4
TPR.G3714 Trifolium pratense HOM05D000961 ORTHO05D000841 3.2e-06 54.7 39 64.1
vmacro22358 Vaccinium macrocarpon HOM05D000961 ORTHO05D000841 3.2e-06 54.7 48 52.1
arahy.Tifrunner.gnm1.ann1.2959SN Arachis hypogaea HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
arahy.Tifrunner.gnm1.ann1.FB3Z2N Arachis hypogaea HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
CDE02G3948 Ceratophyllum demersum HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
AUR62015393 Chenopodium quinoa HOM05D000961 ORTHO05D000841 4.1e-06 54.3 36 63.9
Duzib151G0135 Durio zibethinus HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
Nn1g09882 Nelumbo nucifera HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
Phvul.001G134832 Phaseolus vulgaris HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
Psat0s3543g0040 Pisum sativum HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
Thecc.04G180300 Theobroma cacao HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
TWI53G1548 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 4.1e-06 54.3 31 74.2
Aqoxy2G04098 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 5.4e-06 53.9 31 74.2
ClCG09G004020 Citrullus lanatus HOM05D000961 ORTHO05D000841 5.4e-06 53.9 31 74.2
Gohir.D09G204300 Gossypium hirsutum HOM05D000961 ORTHO05D000841 5.4e-06 53.9 31 74.2
Gorai.006G228200 Gossypium raimondii HOM05D000961 ORTHO05D000841 5.4e-06 53.9 31 74.2
TWI77G0571 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 5.4e-06 53.9 31 74.2
EL10Ac3g05927 Beta vulgaris HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
BcaC07g42096 Brassica carinata HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
CDE09G1085 Ceratophyllum demersum HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
Ciclev10018680m.g Citrus clementina HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 71.0
Migut.J01764 Erythranthe guttata HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 71.0
HanXRQChr03g0091141 Helianthus annuus HOM05D000961 ORTHO05D000841 7.0e-06 53.5 33 69.7
Lsat_1_v5_gn_3_115281 Lactuca sativa HOM05D000961 ORTHO05D000841 7.0e-06 53.5 33 69.7
Manes.04G042800 Manihot esculenta HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
Nn7g36249 Nelumbo nucifera HOM05D000961 ORTHO05D000841 7.0e-06 53.5 33 66.7
Oeu033146.1 Olea europaea HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 71.0
PSO170G6058 Papaver somniferum HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
PSO357G0095 Papaver somniferum HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
RcHm_v2.0_Chr4g0406851 Rosa chinensis HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
TWI38G1188 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
TAR633G0091 Trochodendron aralioides HOM05D000961 ORTHO05D000841 7.0e-06 53.5 33 72.7
HPP92_010413 Vanilla planifolia HOM05D000961 ORTHO05D000841 7.0e-06 53.5 31 74.2
VMungo1080G0334 Vigna mungo HOM05D000961 ORTHO05D000841 7.0e-06 53.5 33 69.7
Ah.13g076420 Amaranthus hybridus HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 71.0
Aqoxy2G00162 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 9.2e-06 53.1 30 76.7
CiPaw.09G037400 Carya illinoinensis HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 71.0
CiPaw.10G032800 Carya illinoinensis HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 71.0
FvH4_4g10730 Fragaria vesca HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 74.2
FAN22G1340 Fragaria x ananassa HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 74.2
MD12G1077200 Malus domestica HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 71.0
MD14G1070800 Malus domestica HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 71.0
Peaxi162Scf00297g01125 Petunia axillaris HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 74.2
Solyc11g044480.2 Solanum lycopersicum HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 74.2
Sopen11g020050 Solanum pennellii HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 74.2
TAR623G1550 Trochodendron aralioides HOM05D000961 ORTHO05D000841 9.2e-06 53.1 31 71.0


User provided reference genes

Program Settings