Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.1e-187 659.8 325 100.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.7e-185 652.5 325 99.1
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.3e-148 530.0 330 79.1
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.3e-142 509.2 326 76.7
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.3e-142 509.2 326 76.7
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 2.1e-135 486.1 325 70.8
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 2.3e-134 482.6 321 74.5
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 5.7e-133 478.0 300 78.7
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 4.5e-130 468.4 341 67.7
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 3.8e-129 465.3 330 68.5
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 6.5e-129 464.5 330 67.9
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.2e-127 460.3 333 67.6
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 1.4e-126 456.8 330 66.1
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 4.0e-126 455.3 325 68.3
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.6e-125 452.6 327 66.1
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 2.6e-125 452.6 323 67.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 5.7e-125 451.4 330 67.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.8e-123 446.4 329 66.0
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 7.0e-123 444.5 325 66.2
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 2.7e-122 442.6 329 65.7
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 4.5e-122 441.8 323 64.1
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 7.7e-122 441.0 329 65.3
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 7.7e-122 441.0 329 66.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 7.7e-122 441.0 329 65.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.0e-121 440.7 327 63.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.7e-121 439.9 328 64.3
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 8.5e-121 437.6 325 64.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 3.2e-120 435.6 329 63.8
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.2e-120 435.3 327 62.4
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 7.2e-120 434.5 327 62.7
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 1.6e-119 433.3 328 64.6
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 4.7e-119 431.8 326 64.7
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 8.0e-119 431.0 330 64.2
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.4e-118 430.3 329 65.3
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.8e-118 429.9 325 64.3
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 5.2e-118 428.3 325 63.4
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 5.2e-118 428.3 329 64.1
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 8.8e-118 427.6 329 62.6
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.6e-117 426.0 328 62.8
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 3.4e-117 425.6 325 63.4
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.4e-117 425.2 330 62.4
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.7e-116 423.3 322 62.7
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 3.7e-116 422.2 293 71.0
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.3e-116 421.4 325 63.7
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.4e-115 420.2 327 62.7
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 1.4e-115 420.2 325 64.9
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 5.4e-115 418.3 327 63.3
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 7.0e-115 417.9 325 63.4
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 2.0e-114 416.4 327 62.7
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.0e-113 414.1 322 63.4
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.7e-113 413.3 325 63.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.2e-113 412.9 328 61.3
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 1.1e-112 410.6 327 62.7
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.9e-112 409.8 334 61.4
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 2.5e-112 409.5 326 59.2
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 2.5e-112 409.5 325 60.3
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 7.2e-112 407.9 327 59.9
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 9.4e-112 407.5 329 61.4
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.2e-111 407.1 329 62.3
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-111 407.1 333 61.9
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 2.7e-111 406.0 330 60.0
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.7e-111 405.2 333 61.6
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 4.7e-111 405.2 334 59.9
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 4.7e-111 405.2 327 63.3
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.2e-109 400.6 327 62.1
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 4.9e-108 395.2 327 57.8
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 5.4e-107 391.7 345 55.4
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.4e-107 391.7 333 59.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 7.0e-107 391.3 324 61.4
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 2.7e-106 389.4 323 61.9
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 3.8e-105 385.6 327 59.9
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 8.6e-105 384.4 297 64.6
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.5e-104 382.9 324 61.1
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 1.2e-103 380.6 330 55.2
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.6e-103 380.2 323 60.4
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 4.7e-103 378.6 286 64.7
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 5.2e-102 375.2 367 54.8
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 2.0e-101 373.2 333 55.9
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.1e-99 367.5 330 54.5
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 9.5e-96 354.4 333 52.3
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 6.2e-95 351.7 324 53.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 5.2e-94 348.6 322 55.0
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 6.8e-94 348.2 324 52.8
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.2e-93 347.4 326 53.7
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.5e-93 347.1 326 54.0
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.5e-93 347.1 326 54.0
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 5.8e-93 345.1 310 54.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 6.4e-92 341.7 266 64.3
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 2.0e-90 336.7 325 51.4
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.7e-89 333.6 336 51.8
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 8.6e-89 331.3 330 52.1
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 3.3e-88 329.3 332 53.0
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 9.5e-88 327.8 327 50.8
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.8e-87 326.2 329 54.1
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 3.5e-82 309.3 264 59.1
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 3.3e-80 302.8 329 47.1
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 8.9e-78 294.7 327 50.5
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.5e-77 293.9 264 58.7
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 9.9e-77 291.2 339 44.2
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 5.4e-75 285.4 354 46.6
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 7.8e-74 281.6 213 65.7
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 2.0e-69 266.9 329 44.7
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.0e-65 254.6 181 68.5
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 6.6e-65 251.9 383 38.9
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.8e-63 246.5 382 38.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.6e-55 220.7 157 70.7
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 6.7e-49 198.7 133 69.2
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.3e-48 196.4 133 69.9
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.5e-40 170.2 123 67.5
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 9.0e-38 161.8 117 65.8
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.3e-36 157.9 133 54.1
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 5.0e-36 156.0 325 30.8
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.1e-34 150.6 104 70.2
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 6.7e-33 145.6 195 43.6
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.9e-32 144.1 118 66.1
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 4.2e-27 126.3 147 49.7
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 7.2e-27 125.6 87 67.8
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 9.4e-27 125.2 98 61.2
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.2e-21 108.2 268 29.9
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 2.7e-18 97.1 320 25.3
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.4e-17 94.7 61 72.1
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.1e-14 85.1 98 49.0
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 5.9e-13 79.3 65 53.8
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.5e-11 74.7 48 68.8
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 2.3e-09 67.4 49 65.3
Actinidia40385 Actinidia chinensis HOM05D002637 ORTHO05D055098 1.4e-06 58.2 80 45.0


User provided reference genes

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