Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 3.2e-74 281.6 135 100.0
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 6.1e-73 277.3 135 99.3
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 8.3e-62 240.4 120 95.8
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 7.6e-31 137.5 107 60.7
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 1.1e-29 133.7 96 67.7
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 3.2e-29 132.1 82 74.4
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 7.1e-29 131.0 83 73.5
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 6.0e-28 127.9 81 74.1
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 6.0e-28 127.9 101 59.4
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 5.6e-26 121.3 100 57.0
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 7.3e-26 120.9 102 57.8
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 6.2e-25 117.9 84 64.3
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 1.4e-24 116.7 82 63.4
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 2.4e-24 115.9 80 66.2
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 3.1e-24 115.5 110 53.6
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 4.0e-24 115.2 93 61.3
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 5.3e-24 114.8 94 56.4
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 2.0e-23 112.8 101 55.4
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 2.6e-23 112.5 72 69.4
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 3.4e-23 112.1 87 57.5
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 3.4e-23 112.1 107 54.2
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 3.4e-23 112.1 82 62.2
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 3.4e-23 112.1 81 63.0
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 5.8e-23 111.3 89 57.3
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 5.8e-23 111.3 96 58.3
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 9.9e-23 110.5 81 61.7
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 2.9e-22 109.0 81 60.5
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 2.9e-22 109.0 81 60.5
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 3.8e-22 108.6 77 64.9
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 8.4e-22 107.5 79 62.0
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 1.1e-21 107.1 79 60.8
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 1.9e-21 106.3 96 54.2
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 1.9e-21 106.3 103 49.5
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 1.9e-21 106.3 85 60.0
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 1.9e-21 106.3 88 58.0
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 1.9e-21 106.3 97 55.7
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 1.9e-21 106.3 100 53.0
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 3.2e-21 105.5 76 65.8
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 7.1e-21 104.4 83 60.2
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 7.1e-21 104.4 97 54.6
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 1.2e-20 103.6 99 56.6
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 1.2e-20 103.6 86 59.3
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 1.6e-20 103.2 80 63.8
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 2.7e-20 102.4 79 57.0
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 3.5e-20 102.1 81 63.0
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 3.5e-20 102.1 102 48.0
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 4.6e-20 101.7 83 60.2
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 4.6e-20 101.7 83 60.2
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 7.9e-20 100.9 84 57.1
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 7.9e-20 100.9 83 59.0
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 1.3e-19 100.1 86 52.3
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 2.3e-19 99.4 83 57.8
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 3.0e-19 99.0 84 57.1
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 3.0e-19 99.0 82 61.0
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 3.0e-19 99.0 83 59.0
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 3.9e-19 98.6 84 56.0
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 3.9e-19 98.6 97 50.5
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 5.1e-19 98.2 97 51.5
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 5.1e-19 98.2 77 62.3
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 1.1e-18 97.1 131 43.5
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 5.6e-18 94.7 96 47.9
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 1.6e-17 93.2 89 49.4
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 3.6e-17 92.0 102 47.1
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 3.1e-16 89.0 77 57.1
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 3.1e-16 89.0 95 47.4
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 4.0e-16 88.6 103 45.6
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 6.9e-16 87.8 106 43.4
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 9.0e-16 87.4 83 51.8
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 1.5e-15 86.7 103 45.6
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 3.4e-15 85.5 101 43.6
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 4.5e-15 85.1 82 50.0
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 5.8e-15 84.7 106 41.5
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 5.8e-15 84.7 106 41.5
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 7.6e-15 84.3 54 72.2
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 3.5e-12 75.5 50 62.0
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 3.5e-12 75.5 101 39.6
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.0e-11 73.9 73 50.7
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 5.1e-11 71.6 65 52.3
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 2.8e-09 65.9 50 60.0


User provided reference genes

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