Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036106 Camellia sinensis var. sinensis HOM05D005403 ORTHO05D006572 8.4e-28 126.3 65 100.0
MD04G1222600 Malus domestica HOM05D005403 ORTHO05D006572 1.2e-10 69.3 43 74.4
RcHm_v2.0_Chr3g0451391 Rosa chinensis HOM05D005403 ORTHO05D006572 2.1e-10 68.6 43 72.1
MD12G1238700 Malus domestica HOM05D005403 ORTHO05D006572 2.7e-10 68.2 43 72.1
Prupe.6G341600 Prunus persica HOM05D005403 ORTHO05D006572 2.7e-10 68.2 43 72.1
Actinidia05774 Actinidia chinensis HOM05D005403 ORTHO05D006572 1.0e-09 66.2 43 72.1
CANSAT54G1830 Cannabis sativa HOM05D005403 ORTHO05D006572 1.0e-09 66.2 43 69.8
Cc02_g31920 Coffea canephora HOM05D005403 ORTHO05D006572 1.0e-09 66.2 43 72.1
TAR362G0997 Trochodendron aralioides HOM05D005403 ORTHO05D006572 1.3e-09 65.9 43 69.8
GSVIVG01021827001 Vitis vinifera HOM05D005403 ORTHO05D006572 1.3e-09 65.9 43 67.4
FvH4_6g03140 Fragaria vesca HOM05D005403 ORTHO05D006572 2.3e-09 65.1 43 67.4
FAN02G1200 Fragaria x ananassa HOM05D005403 ORTHO05D006572 2.3e-09 65.1 43 67.4
FAN05G1135 Fragaria x ananassa HOM05D005403 ORTHO05D006572 2.3e-09 65.1 43 67.4
FAN05G5291 Fragaria x ananassa HOM05D005403 ORTHO05D006572 2.3e-09 65.1 43 67.4
FAN09G2181 Fragaria x ananassa HOM05D005403 ORTHO05D006572 2.3e-09 65.1 43 67.4
TAR365G0414 Trochodendron aralioides HOM05D005403 ORTHO05D006572 2.3e-09 65.1 43 67.4
Dinv05370 Davidia involucrata HOM05D005403 ORTHO05D006572 3.0e-09 64.7 43 69.8
Actinidia30938 Actinidia chinensis HOM05D005403 ORTHO05D006572 3.9e-09 64.3 43 69.8
Nn1g02427 Nelumbo nucifera HOM05D005403 ORTHO05D006572 3.9e-09 64.3 43 67.4
Sc09g0003870 Simmondsia chinensis HOM05D005403 ORTHO05D006572 3.9e-09 64.3 43 69.8
Thecc.05G286500 Theobroma cacao HOM05D005403 ORTHO05D006572 3.9e-09 64.3 42 69.0
TWI74G0584 Tripterygium wilfordii HOM05D005403 ORTHO05D006572 3.9e-09 64.3 43 69.8
TWI77G0725 Tripterygium wilfordii HOM05D005403 ORTHO05D006572 3.9e-09 64.3 43 69.8
Dinv20864 Davidia involucrata HOM05D005403 ORTHO05D006572 5.1e-09 63.9 43 69.8
FAN14G0649 Fragaria x ananassa HOM05D005403 ORTHO05D006572 5.1e-09 63.9 43 65.1
CiPaw.08G124800 Carya illinoinensis HOM05D005403 ORTHO05D006572 6.7e-09 63.5 43 67.4
Manes.08G133000 Manihot esculenta HOM05D005403 ORTHO05D006572 6.7e-09 63.5 43 67.4
QL03p025010 Quercus lobata HOM05D005403 ORTHO05D006572 6.7e-09 63.5 43 67.4
arahy.Tifrunner.gnm1.ann1.XU8J57 Arachis hypogaea HOM05D005403 ORTHO05D006572 8.7e-09 63.2 43 67.4
Cc02_g31890 Coffea canephora HOM05D005403 ORTHO05D006572 8.7e-09 63.2 40 75.0
Phvul.007G187000 Phaseolus vulgaris HOM05D005403 ORTHO05D006572 8.7e-09 63.2 43 65.1
SGA_v2.0_scaffold81G26087 Striga asiatica HOM05D005403 ORTHO05D006572 8.7e-09 63.2 43 72.1
Nn6g34152 Nelumbo nucifera HOM05D005403 ORTHO05D006572 1.1e-08 62.8 43 67.4
Nitab4.5_0005582g0040 Nicotiana tabacum HOM05D005403 ORTHO05D006572 1.1e-08 62.8 43 65.1
Hund06962 Selenicereus undatus HOM05D005403 ORTHO05D006572 1.1e-08 62.8 43 65.1
VMungo0720G0096 Vigna mungo HOM05D005403 ORTHO05D006572 1.1e-08 62.8 43 65.1
Manes.09G153900 Manihot esculenta HOM05D005403 ORTHO05D006572 1.5e-08 62.4 43 65.1
Ca_10048_v3 Cicer arietinum L. HOM05D005403 ORTHO05D006572 1.9e-08 62.0 43 62.8
Glyma.10G161600 Glycine max HOM05D005403 ORTHO05D006572 1.9e-08 62.0 43 65.1
AT3G04780 Arabidopsis thaliana HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
A05p42780 Brassica napus HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
C05p62500 Brassica napus HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
BraA05t22974Z Brassica rapa HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
Carub.0003s0395 Capsella rubella HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
DCAR_027617 Daucus carota HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
Eucgr.B02113 Eucalyptus grandis HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
Sp3g03620 Schrenkiella parvula HOM05D005403 ORTHO05D006572 2.5e-08 61.6 43 65.1
AL3G14940 Arabidopsis lyrata HOM05D005403 ORTHO05D006572 3.3e-08 61.2 43 65.1
BcaB04g21347 Brassica carinata HOM05D005403 ORTHO05D006572 3.3e-08 61.2 43 65.1
BcaNung06422 Brassica carinata HOM05D005403 ORTHO05D006572 3.3e-08 61.2 43 65.1
PSO210G2729 Papaver somniferum HOM05D005403 ORTHO05D006572 3.3e-08 61.2 44 65.9
PSO832G0823 Papaver somniferum HOM05D005403 ORTHO05D006572 3.3e-08 61.2 44 65.9
PGR083G0704 Punica granatum HOM05D005403 ORTHO05D006572 3.3e-08 61.2 43 65.1
Sopen01g041120 Solanum pennellii HOM05D005403 ORTHO05D006572 3.3e-08 61.2 43 65.1
THA.LOC104818636 Tarenaya hassleriana HOM05D005403 ORTHO05D006572 3.3e-08 61.2 43 65.1
EL10Ac4g09116 Beta vulgaris HOM05D005403 ORTHO05D006572 4.3e-08 60.8 43 65.1
BNapus_Darmor_BZH_scaffold_78p01010 Brassica napus HOM05D005403 ORTHO05D006572 4.3e-08 60.8 43 62.8
BolC1t05726H Brassica oleracea HOM05D005403 ORTHO05D006572 4.3e-08 60.8 43 62.8
BraA01t04505Z Brassica rapa HOM05D005403 ORTHO05D006572 4.3e-08 60.8 43 62.8
CAN.G134.109 Capsicum annuum HOM05D005403 ORTHO05D006572 4.3e-08 60.8 43 67.4
Duzib106G1152 Durio zibethinus HOM05D005403 ORTHO05D006572 4.3e-08 60.8 42 61.9
vmacro05240 Vaccinium macrocarpon HOM05D005403 ORTHO05D006572 4.3e-08 60.8 43 65.1
CARHR079030 Cardamine hirsuta HOM05D005403 ORTHO05D006572 5.7e-08 60.5 43 62.8
MBI11_g35357_MAGBIO Magnolia biondii HOM05D005403 ORTHO05D006572 5.7e-08 60.5 43 60.5
Nitab4.5_0004469g0080 Nicotiana tabacum HOM05D005403 ORTHO05D006572 5.7e-08 60.5 43 62.8
AUR62001024 Chenopodium quinoa HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 65.1
AUR62004927 Chenopodium quinoa HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 65.1
Migut.N01905 Erythranthe guttata HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 65.1
Gohir.D11G263600 Gossypium hirsutum HOM05D005403 ORTHO05D006572 7.4e-08 60.1 42 61.9
Gorai.007G283600 Gossypium raimondii HOM05D005403 ORTHO05D006572 7.4e-08 60.1 42 61.9
HanXRQChr15g0493451 Helianthus annuus HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 62.8
Lj5g0020047 Lotus japonicus HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 62.8
Potri.005G052100 Populus trichocarpa HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 62.8
Rhsim10G0108600 Rhododendron simsii HOM05D005403 ORTHO05D006572 7.4e-08 60.1 44 63.6
Sabra05G0045800 Salix brachista HOM05D005403 ORTHO05D006572 7.4e-08 60.1 43 62.8
Lsat_1_v5_gn_4_137100 Lactuca sativa HOM05D005403 ORTHO05D006572 9.7e-08 59.7 43 62.8
Lalb_Chr06g0168031 Lupinus albus HOM05D005403 ORTHO05D006572 9.7e-08 59.7 45 64.4
Peaxi162Scf00282g00219 Petunia axillaris HOM05D005403 ORTHO05D006572 9.7e-08 59.7 43 60.5
Psat6g146440 Pisum sativum HOM05D005403 ORTHO05D006572 9.7e-08 59.7 53 54.7
Thhalv10021632m.g Eutrema salsugineum HOM05D005403 ORTHO05D006572 1.3e-07 59.3 43 62.8
Hma1.2p1_0332F.1_g127630 Hydrangea macrophylla HOM05D005403 ORTHO05D006572 1.3e-07 59.3 43 65.1
PGSC0003DMG400019449 Solanum tuberosum HOM05D005403 ORTHO05D006572 1.3e-07 59.3 43 60.5
Gorai.013G201200 Gossypium raimondii HOM05D005403 ORTHO05D006572 1.6e-07 58.9 42 59.5
Aa31LG5G15180 Aethionema arabicum HOM05D005403 ORTHO05D006572 2.2e-07 58.5 43 60.5
Duzib177G0905 Durio zibethinus HOM05D005403 ORTHO05D006572 2.2e-07 58.5 42 59.5
Gohir.A13G170400 Gossypium hirsutum HOM05D005403 ORTHO05D006572 2.8e-07 58.2 42 59.5
Gohir.D13G175800 Gossypium hirsutum HOM05D005403 ORTHO05D006572 2.8e-07 58.2 42 59.5
Potri.013G039500 Populus trichocarpa HOM05D005403 ORTHO05D006572 2.8e-07 58.2 43 58.1
ATR0665G176 Amborella trichopoda HOM05D005403 ORTHO05D006572 3.7e-07 57.8 38 65.8
Oeu027466.2 Olea europaea HOM05D005403 ORTHO05D006572 3.7e-07 57.8 40 65.0
SalBow8G2599 Salvia bowleyana HOM05D005403 ORTHO05D006572 3.7e-07 57.8 43 58.1
Ciclev10002653m.g Citrus clementina HOM05D005403 ORTHO05D006572 4.8e-07 57.4 43 58.1
Solyc01g097450.3 Solanum lycopersicum HOM05D005403 ORTHO05D006572 4.8e-07 57.4 43 60.5
Ah.06g192240 Amaranthus hybridus HOM05D005403 ORTHO05D006572 8.2e-07 56.6 43 60.5
Sabra13G0036900 Salix brachista HOM05D005403 ORTHO05D006572 8.2e-07 56.6 43 58.1
SGA_v2.0_scaffold80G25907 Striga asiatica HOM05D005403 ORTHO05D006572 8.2e-07 56.6 43 62.8
unitig_21.g20052 Utricularia gibba HOM05D005403 ORTHO05D006572 8.2e-07 56.6 43 62.8
Lalb_Chr02g0148771 Lupinus albus HOM05D005403 ORTHO05D006572 1.8e-06 55.5 38 63.2
Haze_04345 Corylus avellana HOM05D005403 ORTHO05D006572 2.4e-06 55.1 58 51.7
ECA232G3347 Erigeron canadensis HOM05D005403 ORTHO05D006572 2.4e-06 55.1 38 63.2
TPR.G30942 Trifolium pratense HOM05D005403 ORTHO05D006572 4.1e-06 54.3 44 59.1
Os03g0795500 Oryza sativa ssp. japonica HOM05D005403 ORTHO05D006572 6.9e-06 53.5 35 62.9


User provided reference genes

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