Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036097 Camellia sinensis var. sinensis HOM05D013334 ORTHO05D015998 6.1e-113 411.0 231 100.0
CSS0028127 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.1e-43 178.7 110 91.8
CSS0029366 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.1e-43 178.7 110 91.8
CSS0002633 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.9e-42 176.8 110 90.9
CSS0016346 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.9e-42 176.8 110 90.9
CSS0011756 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.8e-41 172.9 110 90.0
CSS0037427 Camellia sinensis var. sinensis HOM05D013334 ORTHO05D000014 5.3e-40 168.7 106 89.6
CSS0009102 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-22 108.6 113 59.3
CSS0034212 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-20 103.6 113 57.5
CSS0009823 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.6e-20 102.4 113 56.6
Actinidia33656 Actinidia chinensis HOM05D000023 ORTHO05D000014 4.6e-12 75.9 110 49.1
Actinidia37568 Actinidia chinensis HOM05D009210 ORTHO05D010367 3.9e-11 72.8 77 50.6
QL10p013035 Quercus lobata HOM05D000023 ORTHO05D000014 8.7e-11 71.6 94 48.9
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 1.5e-10 70.9 98 48.0
CSS0017113 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.9e-10 70.5 107 50.5
QL10p003965 Quercus lobata HOM05D000023 ORTHO05D000014 2.5e-10 70.1 95 52.6
Nitab4.5_0001557g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 9.7e-10 68.2 91 40.7
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-09 67.4 110 46.4
CSS0034924 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.2e-09 65.1 106 47.2
Nitab4.5_0002330g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 1.4e-08 64.3 91 39.6
GSVIVG01028492001 Vitis vinifera HOM05D000023 ORTHO05D012697 1.2e-07 61.2 99 45.5
CSS0008330 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.0e-07 60.5 106 45.3
GSVIVG01012413001 Vitis vinifera HOM05D000023 ORTHO05D000014 3.4e-07 59.7 99 44.4
Hma1.2p1_2288F.1_g318960 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.5e-07 59.3 98 45.9
Hma1.2p1_0696F.1_g204560 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-07 58.9 72 47.2
Hma1.2p1_0696F.1_g204562 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-07 58.9 72 47.2
Hma1.2p1_0696F.1_g204573 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-07 58.9 72 47.2
Hma1.2p1_0696F.1_g204576 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-07 58.9 72 47.2
Hma1.2p1_0696F.1_g204595 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-07 58.9 72 47.2
Hma1.2p1_0696F.1_g204596 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.9e-07 58.9 72 47.2
C09p51190 Brassica napus HOM05D000023 ORTHO05D000014 7.7e-07 58.5 100 41.0
Nn8g40496 Nelumbo nucifera HOM05D017141 ORTHO05D000014 1.0e-06 58.2 107 44.9
CSS0050162 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.3e-06 57.8 94 50.0
Hund06285 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-06 57.8 47 63.8
Sopen06g035070 Solanum pennellii HOM05D013334 ORTHO05D015998 1.3e-06 57.8 90 38.9
MSTRG.16385 Avicennia marina HOM05D000023 ORTHO05D000014 1.7e-06 57.4 122 42.6
Hma1.2p1_0696F.1_g204565 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-06 57.4 67 52.2
Hma1.2p1_0696F.1_g204590 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-06 57.4 67 52.2
QL01p046256 Quercus lobata HOM05D000003 ORTHO05D000006 1.7e-06 57.4 76 51.3
SHI26408 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-06 57.4 110 41.8
MSTRG.22845 Avicennia marina HOM05D000023 ORTHO05D000014 2.2e-06 57.0 83 47.0
Hund01372 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-06 57.0 117 38.5
Hund02011 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-06 57.0 120 41.7
Peaxi162Scf00517g00315 Petunia axillaris HOM05D013334 ORTHO05D015998 2.9e-06 56.6 85 40.0
Hund04191 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-06 56.6 47 63.8
Hund15381 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-06 56.6 75 48.0
Hund15382 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-06 56.6 75 48.0
Hund01915 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-06 56.2 47 63.8
Hund20765 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-06 56.2 44 63.6
THA.LOC104803372 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 5.0e-06 55.8 96 41.7
CSS0048849 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.5e-06 55.5 98 41.8
Hma1.2p1_0696F.1_g204543 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204563 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204564 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204566 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204567 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204579 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204580 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204592 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
Hma1.2p1_0696F.1_g204593 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-06 55.5 72 45.8
HanXRQChr13g0408971 Helianthus annuus HOM05D040207 ORTHO05D010367 8.5e-06 55.1 98 40.8
Hund12336 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.5e-06 55.1 129 36.4
PGSC0003DMG400020082 Solanum tuberosum HOM05D013334 ORTHO05D015998 8.5e-06 55.1 91 36.3


User provided reference genes

Program Settings