Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.8e-100 369.4 203 100.0
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.7e-98 361.7 212 90.6
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 1.0e-79 300.4 232 69.8
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.9e-79 298.5 213 76.5
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.2e-77 293.5 212 75.9
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.8e-77 292.4 212 74.1
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 5.2e-76 288.1 212 74.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 5.2e-76 288.1 212 74.1
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.5e-75 286.6 217 72.8
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.3e-74 283.5 221 69.7
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.4e-73 279.3 216 72.2
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.4e-73 279.3 213 72.8
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 5.4e-73 278.1 220 68.6
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.1e-73 277.7 215 71.2
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.2e-72 276.9 215 71.6
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.7e-72 275.8 217 70.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 3.5e-72 275.4 212 72.6
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.0e-71 273.9 215 68.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.7e-71 273.1 218 70.6
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 6.6e-71 271.2 216 69.9
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.1e-70 270.4 218 69.7
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.9e-70 269.6 216 69.9
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 7.3e-70 267.7 234 65.8
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 7.3e-70 267.7 212 70.3
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 7.3e-70 267.7 220 66.8
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.5e-70 267.3 216 69.0
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.6e-69 266.5 212 69.8
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.6e-69 266.5 223 65.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.8e-69 265.8 212 67.5
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 6.2e-69 264.6 212 67.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 6.2e-69 264.6 206 69.9
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.1e-68 263.8 215 69.3
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.8e-68 263.1 208 68.3
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 4.0e-68 261.9 220 66.8
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 6.8e-68 261.2 212 67.5
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 6.8e-68 261.2 213 68.1
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 2.0e-67 259.6 215 65.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.0e-67 259.6 211 68.2
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.6e-67 259.2 140 91.4
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 5.8e-67 258.1 214 67.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.6e-67 257.7 217 66.8
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.7e-66 256.5 216 67.1
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.9e-66 255.8 221 65.2
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.9e-66 255.0 142 89.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.9e-66 255.0 193 71.0
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 6.4e-66 254.6 217 64.5
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.4e-65 253.4 211 70.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.4e-65 253.4 142 88.0
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 3.2e-65 252.3 142 88.0
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 5.4e-65 251.5 219 63.0
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 5.4e-65 251.5 148 82.4
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.2e-64 250.4 139 89.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.2e-64 250.4 195 69.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.1e-64 249.6 203 68.0
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.7e-64 249.2 205 67.8
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.6e-64 248.4 146 85.6
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.3e-63 246.9 138 88.4
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 2.3e-63 246.1 145 84.8
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 3.9e-63 245.4 142 85.2
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 6.6e-63 244.6 212 63.7
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 6.6e-63 244.6 212 62.7
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.5e-62 243.4 142 82.4
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.5e-62 242.7 138 86.2
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 2.5e-62 242.7 218 62.4
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.3e-62 242.3 206 66.0
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.6e-61 240.0 142 81.0
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 3.6e-61 238.8 215 62.8
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.6e-61 238.8 212 63.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.7e-61 238.4 147 83.0
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 8.1e-61 237.7 142 80.3
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.1e-60 237.3 211 63.5
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-60 237.3 142 85.9
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.1e-60 237.3 140 82.9
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 3.1e-60 235.7 210 61.9
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 5.2e-60 235.0 144 78.5
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 2.0e-59 233.0 194 67.0
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.0e-59 233.0 137 83.2
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 5.8e-59 231.5 169 75.7
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 5.8e-59 231.5 208 61.5
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 7.6e-59 231.1 141 80.9
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.9e-58 229.2 207 59.9
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 8.4e-58 227.6 194 62.9
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.1e-57 227.3 128 85.9
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.9e-57 226.5 137 80.3
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.9e-57 226.5 217 63.1
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.6e-56 223.4 166 69.3
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.6e-56 223.4 166 69.3
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.7e-55 219.9 214 57.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.0e-55 219.2 176 66.5
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.5e-54 216.9 136 77.9
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 4.3e-54 215.3 218 59.2
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.3e-54 215.3 193 62.2
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 7.3e-54 214.5 223 57.4
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 7.3e-54 214.5 135 76.3
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 9.6e-54 214.2 222 55.9
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.8e-52 209.9 138 70.3
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.5e-51 206.8 156 64.7
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.6e-51 206.1 155 69.0
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.5e-48 195.7 109 89.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.7e-47 193.4 107 89.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.3e-46 188.7 110 87.3
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 4.3e-46 188.7 172 64.0
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 5.6e-46 188.3 131 67.9
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 4.3e-38 162.2 148 63.5
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.8e-37 158.7 159 57.9
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.6e-35 151.4 148 60.1
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.9e-34 149.4 147 59.2
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.8e-34 149.1 159 55.3
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 2.5e-33 146.4 86 80.2
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.0e-31 139.4 72 93.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 4.2e-25 119.0 155 39.4
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.0e-23 114.4 68 82.4
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.0e-23 114.4 68 82.4
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.1e-17 94.4 58 75.9
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.6e-16 90.5 102 52.9
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.2e-13 80.1 52 73.1


User provided reference genes

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