Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 5.6e-98 360.9 179 100.0
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 9.2e-93 343.6 170 100.0
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 1.6e-57 226.5 169 68.6
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 1.5e-47 193.4 173 62.4
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 1.1e-45 187.2 182 59.9
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.9e-43 178.7 158 63.3
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 2.5e-42 176.0 180 54.4
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 3.3e-42 175.6 184 56.5
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 1.3e-41 173.7 176 56.2
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 2.8e-41 172.6 180 53.3
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 8.2e-41 171.0 175 60.0
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 2.4e-40 169.5 184 53.3
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.2e-39 167.2 180 51.7
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 5.9e-39 164.9 181 52.5
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 8.5e-38 161.0 187 49.7
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.9e-37 159.8 175 54.9
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 4.2e-37 158.7 180 53.3
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 9.4e-37 157.5 169 55.0
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 6.1e-36 154.8 181 48.1
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 7.9e-36 154.5 169 53.8
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 7.9e-36 154.5 169 53.8
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.4e-35 153.7 172 54.1
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 2.3e-35 152.9 176 51.7
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 2.0e-34 149.8 169 48.5
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.6e-34 149.4 178 50.0
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.3e-33 147.1 186 47.8
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 2.2e-33 146.4 173 52.0
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 8.2e-33 144.4 180 47.2
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 3.1e-32 142.5 173 49.1
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 1.2e-31 140.6 171 47.4
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 1.5e-31 140.2 169 47.3
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.5e-31 140.2 178 47.8
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 2.6e-31 139.4 169 46.2
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.3e-30 137.1 170 47.6
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 2.2e-30 136.3 176 43.8
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 2.9e-30 136.0 165 47.9
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.5e-29 133.7 182 45.6
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 2.5e-29 132.9 171 46.2
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.6e-28 130.2 179 46.4
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 8.0e-28 127.9 179 43.6
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 5.2e-27 125.2 159 48.4
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 5.2e-27 125.2 173 46.8
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 8.8e-27 124.4 135 57.8
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 8.8e-27 124.4 166 45.8
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.1e-26 124.0 192 42.2
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 3.3e-26 122.5 173 45.7
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.7e-25 120.2 197 40.6
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.7e-25 120.2 197 40.6
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 8.2e-25 117.9 164 44.5
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.1e-24 117.5 161 46.0
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 4.1e-24 115.5 167 44.9
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.3e-24 115.2 168 43.5
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 2.0e-23 113.2 62 83.9
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.0e-23 113.2 172 44.2
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.5e-23 112.1 163 44.2
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 5.9e-23 111.7 170 42.9
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 7.7e-23 111.3 179 41.3
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.3e-22 110.5 170 41.2
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 1.3e-22 110.5 175 44.0
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 1.7e-22 110.2 170 42.4
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 1.7e-22 110.2 177 44.6
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.7e-22 110.2 172 43.6
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 3.8e-22 109.0 168 42.3
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 9.4e-21 104.4 121 50.4
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 2.1e-20 103.2 174 43.7
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 2.7e-20 102.8 170 38.2
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 3.6e-20 102.4 174 37.4
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 3.6e-20 102.4 171 39.2
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 8.0e-20 101.3 165 39.4
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 8.0e-20 101.3 166 42.2
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 1.4e-19 100.5 170 37.6
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.8e-19 100.1 166 41.6
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.3e-19 99.8 175 42.3
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 2.3e-19 99.8 100 56.0
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.2e-18 97.4 79 62.0
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 2.0e-18 96.7 169 38.5
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 2.6e-18 96.3 169 39.1
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 3.4e-18 95.9 121 48.8
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.7e-17 93.6 93 53.8
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 6.3e-17 91.7 170 38.8
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 8.3e-17 91.3 167 38.9
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.1e-16 90.9 43 95.3
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.1e-16 90.9 107 48.6
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 1.8e-16 90.1 169 36.7
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 1.8e-16 90.1 135 43.7
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 1.8e-16 90.1 106 48.1
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.4e-16 89.7 114 48.2
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.4e-16 89.7 117 47.9
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 3.1e-16 89.4 101 52.5
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 4.1e-16 89.0 169 36.7
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.6e-15 87.0 169 37.3
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 1.6e-15 87.0 54 70.4
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 4.5e-15 85.5 107 46.7
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 7.7e-15 84.7 132 42.4
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 1.0e-14 84.3 176 36.9
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.3e-14 84.0 108 47.2
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 2.2e-14 83.2 180 35.6
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 5.0e-14 82.0 130 40.8
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.0e-14 82.0 96 52.1
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 8.5e-14 81.3 176 35.8
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 1.1e-13 80.9 166 37.3
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.9e-13 80.1 134 39.6
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.9e-13 80.1 134 39.6
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 1.2e-12 77.4 99 46.5
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 2.7e-12 76.3 108 43.5
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 5.2e-11 72.0 53 58.5
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 5.2e-11 72.0 167 33.5
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 4.4e-10 68.9 31 96.8
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.3e-09 67.4 31 93.5
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 1.7e-09 67.0 31 93.5
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 3.7e-09 65.9 31 87.1
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 7.0e-08 61.6 55 60.0
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 7.7e-07 58.2 104 33.7
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 7.7e-07 58.2 48 50.0
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 2.3e-06 56.6 31 80.6
TPR.G12357 Trifolium pratense HOM05D006739 ORTHO05D008402 2.3e-06 56.6 80 36.2


User provided reference genes

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