Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036066 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D008781 2.1e-141 505.8 269 100.0
CSS0011538 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D008781 6.6e-111 404.4 198 99.5
Actinidia24629 Actinidia chinensis HOM05D000188 ORTHO05D008781 6.7e-95 351.3 199 85.9
Actinidia28899 Actinidia chinensis HOM05D000188 ORTHO05D008781 1.9e-94 349.7 194 87.6
Actinidia08784 Actinidia chinensis HOM05D000188 ORTHO05D008781 4.3e-94 348.6 194 88.1
Rhsim03G0225800 Rhododendron simsii HOM05D000188 ORTHO05D008781 2.8e-85 319.3 191 81.2
Thecc.05G229200 Theobroma cacao HOM05D000188 ORTHO05D008781 6.2e-85 318.2 197 77.7
Nn1g09370 Nelumbo nucifera HOM05D000188 ORTHO05D008781 8.1e-85 317.8 199 80.4
Aqoxy7G00904 Aquilegia oxysepala HOM05D000188 ORTHO05D008781 1.4e-84 317.0 190 80.5
COL.COLO4_35630 Corchorus olitorius HOM05D000188 ORTHO05D008781 2.4e-84 316.2 197 76.1
Gorai.007G248100 Gossypium raimondii HOM05D000188 ORTHO05D008781 9.0e-84 314.3 197 77.2
Gohir.D11G235400 Gossypium hirsutum HOM05D000188 ORTHO05D008781 2.6e-83 312.8 197 76.6
Nitab4.5_0005545g0030 Nicotiana tabacum HOM05D000188 ORTHO05D008781 3.4e-83 312.4 190 80.0
CAN.G732.28 Capsicum annuum HOM05D000188 ORTHO05D008781 7.6e-83 311.2 196 77.6
Gohir.A11G221800 Gossypium hirsutum HOM05D000188 ORTHO05D008781 1.0e-82 310.8 197 75.6
Nitab4.5_0000021g0910 Nicotiana tabacum HOM05D000188 ORTHO05D008781 1.0e-82 310.8 190 79.5
MSTRG.26918 Avicennia marina HOM05D000188 ORTHO05D008781 1.3e-82 310.5 200 75.0
ClCG01G005410 Citrullus lanatus HOM05D000188 ORTHO05D008781 1.3e-82 310.5 193 79.3
HanXRQChr16g0512181 Helianthus annuus HOM05D000188 ORTHO05D008781 1.3e-82 310.5 192 77.6
ECA232G2771 Erigeron canadensis HOM05D000188 ORTHO05D008781 1.7e-82 310.1 197 75.6
Peaxi162Scf00516g00430 Petunia axillaris HOM05D000188 ORTHO05D008781 2.2e-82 309.7 192 79.2
DCAR_010524 Daucus carota HOM05D000188 ORTHO05D008781 3.8e-82 308.9 194 76.3
PGR102G0056 Punica granatum HOM05D000188 ORTHO05D008781 4.9e-82 308.5 194 76.3
Cpa.g.sc73.90 Carica papaya HOM05D000188 ORTHO05D008781 1.9e-81 306.6 194 76.3
CiPaw.05G210300 Carya illinoinensis HOM05D000188 ORTHO05D008781 1.9e-81 306.6 190 80.0
Lsat_1_v5_gn_9_48021 Lactuca sativa HOM05D000188 ORTHO05D008781 2.5e-81 306.2 194 77.8
Sopen03g028130 Solanum pennellii HOM05D000188 ORTHO05D008781 2.5e-81 306.2 190 77.9
MELO3C005388.2 Cucumis melo HOM05D000188 ORTHO05D008781 4.2e-81 305.4 198 77.3
QL09p005917 Quercus lobata HOM05D000188 ORTHO05D008781 4.2e-81 305.4 189 80.4
PGSC0003DMG400026493 Solanum tuberosum HOM05D000188 ORTHO05D008781 4.2e-81 305.4 190 76.8
Solyc03g097370.4 Solanum lycopersicum HOM05D000188 ORTHO05D008781 7.1e-81 304.7 190 77.4
Ciclev10030616m.g Citrus clementina HOM05D000188 ORTHO05D008781 9.3e-81 304.3 193 76.2
CsaV3_5G005650 Cucumis sativus L. HOM05D000188 ORTHO05D008781 9.3e-81 304.3 194 76.8
Duzib177G0630 Durio zibethinus HOM05D000188 ORTHO05D008781 2.7e-80 302.8 197 74.6
Manes.08G158300 Manihot esculenta HOM05D000188 ORTHO05D008781 3.5e-80 302.4 192 78.1
TWI60G1287 Tripterygium wilfordii HOM05D000188 ORTHO05D008781 3.5e-80 302.4 194 75.3
SGA_v2.0_scaffold244G44328 Striga asiatica HOM05D000188 ORTHO05D008781 1.3e-79 300.4 185 77.8
Eucgr.A02997 Eucalyptus grandis HOM05D000188 ORTHO05D008781 1.8e-79 300.1 191 77.5
Sed0008561 Sechium edule HOM05D000188 ORTHO05D008781 3.9e-79 298.9 190 77.4
Dinv19310 Davidia involucrata HOM05D000188 ORTHO05D008781 7.4e-78 294.7 206 76.2
Potri.013G073900 Populus trichocarpa HOM05D000188 ORTHO05D008781 9.6e-78 294.3 194 73.7
Cfa016122 Carpinus fangiana HOM05D000188 ORTHO05D008781 2.1e-77 293.1 190 77.4
Sabra13G0064100 Salix brachista HOM05D000188 ORTHO05D008781 1.4e-76 290.4 203 70.4
Sed0018723 Sechium edule HOM05D000188 ORTHO05D008781 1.8e-76 290.0 195 72.8
AT5G35970 Arabidopsis thaliana HOM05D000188 ORTHO05D008781 2.6e-75 286.2 197 70.1
Atru.chr2.1726 Acer truncatum HOM05D000188 ORTHO05D008781 5.9e-75 285.0 197 73.1
Atru.chr2.1731 Acer truncatum HOM05D000188 ORTHO05D008781 5.9e-75 285.0 197 73.1
THA.LOC104823790 Tarenaya hassleriana HOM05D000188 ORTHO05D008781 1.0e-74 284.3 194 71.6
AL7G44890 Arabidopsis lyrata HOM05D000188 ORTHO05D008781 1.3e-74 283.9 193 70.5
CARHR216680 Cardamine hirsuta HOM05D000188 ORTHO05D008781 2.2e-74 283.1 189 72.0
Thhalv10003611m.g Eutrema salsugineum HOM05D000188 ORTHO05D008781 2.9e-74 282.7 200 68.5
C04p43530 Brassica napus HOM05D000188 ORTHO05D008781 8.5e-74 281.2 194 69.6
BolC4t25933H Brassica oleracea HOM05D000188 ORTHO05D008781 8.5e-74 281.2 194 69.6
A04p10060 Brassica napus HOM05D000188 ORTHO05D008781 1.9e-73 280.0 194 70.1
Carub.0007s3175 Capsella rubella HOM05D000188 ORTHO05D008781 4.2e-73 278.9 193 69.9
Lj6g0025975 Lotus japonicus HOM05D000188 ORTHO05D008781 5.5e-73 278.5 186 74.2
BraA04t16668Z Brassica rapa HOM05D000188 ORTHO05D008781 1.2e-72 277.3 194 69.1
EL10Ac1g01289 Beta vulgaris HOM05D000188 ORTHO05D008781 1.6e-72 276.9 195 67.7
Hund09814 Selenicereus undatus HOM05D000188 ORTHO05D008781 2.1e-72 276.6 184 72.8
Aa31LG9G17940 Aethionema arabicum HOM05D000188 ORTHO05D008781 2.7e-72 276.2 193 68.9
arahy.Tifrunner.gnm1.ann1.GEGB9W Arachis hypogaea HOM05D000188 ORTHO05D008781 4.6e-72 275.4 186 74.7
Migut.H00001 Erythranthe guttata HOM05D000188 ORTHO05D008781 7.9e-72 274.6 200 70.0
Phvul.007G280900 Phaseolus vulgaris HOM05D000188 ORTHO05D008781 1.0e-71 274.2 185 71.4
Sp7g06150 Schrenkiella parvula HOM05D000188 ORTHO05D008781 1.3e-71 273.9 193 68.9
TPR.G30236 Trifolium pratense HOM05D000188 ORTHO05D008781 1.3e-71 273.9 204 68.6
Ca_26295_v3 Cicer arietinum L. HOM05D000188 ORTHO05D008781 3.0e-71 272.7 198 68.7
Psat6g101880 Pisum sativum HOM05D000188 ORTHO05D008781 1.1e-70 270.8 183 73.2
AUR62002098 Chenopodium quinoa HOM05D000188 ORTHO05D008781 1.9e-70 270.0 187 66.3
AUR62028216 Chenopodium quinoa HOM05D000188 ORTHO05D008781 2.5e-70 269.6 187 65.8
Lalb_Chr01g0020661 Lupinus albus HOM05D000188 ORTHO05D008781 2.5e-70 269.6 187 72.7
arahy.Tifrunner.gnm1.ann1.JCMX0M Arachis hypogaea HOM05D000188 ORTHO05D008781 5.7e-70 268.5 184 73.4
Lj3A882G54 Lonicera japonica HOM05D000188 ORTHO05D008781 2.2e-69 266.5 186 72.0
Ah.04g156110 Amaranthus hybridus HOM05D000188 ORTHO05D008781 4.8e-69 265.4 200 65.0
VMungo0720G2754 Vigna mungo HOM05D000188 ORTHO05D008781 8.2e-69 264.6 184 70.1
Medtr1g040155 Medicago truncatula HOM05D000188 ORTHO05D008781 1.8e-68 263.5 203 66.5
Glyma.10G000200 Glycine max HOM05D000188 ORTHO05D008781 4.1e-68 262.3 198 67.2
PSO675G8488 Papaver somniferum HOM05D000188 ORTHO05D008781 6.9e-68 261.5 208 66.8
PSO502G0008 Papaver somniferum HOM05D000188 ORTHO05D008781 1.5e-67 260.4 208 65.9
Glyma.02G001000 Glycine max HOM05D000188 ORTHO05D008781 2.9e-66 256.1 188 68.6
ATR0568G207 Amborella trichopoda HOM05D000188 ORTHO05D008781 1.9e-65 253.4 186 66.7
Lalb_Chr03g0037951 Lupinus albus HOM05D000188 ORTHO05D008781 1.3e-61 240.7 186 63.4
SEGI_19094 Sequoiadendron giganteum HOM05D000188 ORTHO05D008781 3.2e-57 226.1 183 62.8
Os09g0130800 Oryza sativa ssp. japonica HOM05D000188 ORTHO05D008781 9.4e-57 224.6 194 57.7
Sc19g0000060 Simmondsia chinensis HOM05D000188 ORTHO05D008781 6.1e-56 221.9 175 68.6
CDE11G0723 Ceratophyllum demersum HOM05D000188 ORTHO05D008781 2.3e-55 219.9 197 55.3
Actinidia24511 Actinidia chinensis HOM05D000188 ORTHO05D008781 7.4e-54 214.9 156 71.8
Cc02_g00010 Coffea canephora HOM05D000188 ORTHO05D008781 3.6e-48 196.1 119 80.7
GSVIVG01024253001 Vitis vinifera HOM05D000188 ORTHO05D008781 1.3e-45 187.6 119 75.6
Pp3c5_28660 Physcomitrium patens HOM05D000188 ORTHO05D008781 1.8e-44 183.7 179 49.2
Mapoly0024s0074 Marchantia polymorpha HOM05D000188 ORTHO05D008781 9.4e-41 171.4 185 49.7
AagrBONN_evm.TU.Sc2ySwM_117.1489 Anthoceros agrestis HOM05D000188 ORTHO05D008781 1.2e-40 171.0 185 48.6
TAR629G0071 Trochodendron aralioides HOM05D000188 ORTHO05D008781 4.7e-32 142.5 81 84.0
arahy.Tifrunner.gnm1.ann1.R2W1IV Arachis hypogaea HOM05D000223 ORTHO05D026897 4.0e-31 139.4 115 60.9
SMO118G0482 Selaginella moellendorffii HOM05D000188 ORTHO05D008781 5.9e-27 125.6 161 42.2
arahy.Tifrunner.gnm1.ann1.6W0043 Arachis hypogaea HOM05D001315 ORTHO05D026897 2.5e-25 120.2 77 71.4
TAR629G3326 Trochodendron aralioides HOM05D000188 ORTHO05D008781 5.9e-19 99.0 62 80.6
vmacro06356 Vaccinium macrocarpon HOM05D000188 ORTHO05D008781 8.6e-18 95.1 60 76.7
Haze_00340 Corylus avellana HOM05D000188 ORTHO05D008781 3.2e-12 76.6 61 67.2
Zm00001eb309350 Zea mays HOM05D000188 ORTHO05D008781 4.0e-07 59.7 62 48.4


User provided reference genes

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