Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.0e-44 181.4 90 100.0
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.3e-38 161.0 102 85.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 4.1e-25 117.9 94 67.0
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 7.1e-25 117.1 88 72.7
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.2e-24 116.3 88 72.7
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 3.5e-24 114.8 95 66.3
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.7e-23 112.5 89 66.3
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.7e-23 112.5 89 66.3
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 2.3e-23 112.1 88 68.2
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.0e-23 111.7 88 68.2
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 3.9e-23 111.3 88 65.9
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 6.6e-23 110.5 91 67.0
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 8.6e-23 110.2 88 68.2
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 1.1e-22 109.8 88 67.0
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 2.5e-22 108.6 86 67.4
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.5e-22 108.6 90 66.7
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 3.3e-22 108.2 91 64.8
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 3.3e-22 108.2 86 66.3
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 7.3e-22 107.1 87 64.4
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 7.3e-22 107.1 91 64.8
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 7.3e-22 107.1 88 64.8
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.2e-21 106.3 91 63.7
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.2e-21 106.3 91 60.4
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 1.6e-21 105.9 88 65.9
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 1.6e-21 105.9 88 67.0
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 2.1e-21 105.5 86 66.3
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 2.1e-21 105.5 91 63.7
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 2.8e-21 105.1 89 65.2
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 2.8e-21 105.1 91 61.5
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 3.6e-21 104.8 88 65.9
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 6.2e-21 104.0 90 64.4
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.1e-20 103.2 86 62.8
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 1.4e-20 102.8 91 62.6
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 1.4e-20 102.8 91 58.2
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 1.4e-20 102.8 88 63.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.8e-20 102.4 88 63.6
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.8e-20 102.4 88 63.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.8e-20 102.4 88 63.6
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 2.4e-20 102.1 88 62.5
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 4.0e-20 101.3 86 64.0
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 5.2e-20 100.9 93 61.3
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 6.8e-20 100.5 88 61.4
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 8.9e-20 100.1 88 59.1
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.2e-19 99.8 88 63.6
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.6e-19 98.6 84 63.1
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 2.6e-19 98.6 91 56.0
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 3.4e-19 98.2 85 64.7
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.4e-19 98.2 85 64.7
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.4e-19 98.2 85 64.7
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.4e-19 98.2 85 64.7
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.4e-19 98.2 85 64.7
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 5.8e-19 97.4 91 56.0
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 9.9e-19 96.7 86 59.3
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 9.9e-19 96.7 85 63.5
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 9.9e-19 96.7 96 57.3
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 9.9e-19 96.7 72 70.8
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 3.8e-18 94.7 96 61.5
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 4.9e-18 94.4 88 61.4
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 6.4e-18 94.0 88 60.2
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 8.4e-18 93.6 95 58.9
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 8.4e-18 93.6 89 56.2
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.1e-17 93.2 88 60.2
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.1e-17 93.2 89 56.2
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 1.9e-17 92.4 88 59.1
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.9e-17 92.4 93 58.1
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 3.2e-17 91.7 84 57.1
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 3.2e-17 91.7 84 57.1
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 4.2e-17 91.3 86 60.5
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 5.4e-17 90.9 71 64.8
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 7.1e-17 90.5 88 59.1
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 7.1e-17 90.5 88 59.1
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 7.1e-17 90.5 88 59.1
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 7.1e-17 90.5 88 59.1
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 7.1e-17 90.5 88 59.1
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 7.1e-17 90.5 88 59.1
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 7.1e-17 90.5 84 57.1
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 9.2e-17 90.1 86 59.3
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 9.2e-17 90.1 95 56.8
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.6e-16 89.4 88 58.0
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.6e-16 89.4 88 58.0
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.6e-16 89.4 86 59.3
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.6e-16 89.4 86 59.3
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 2.1e-16 89.0 91 58.2
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 7.8e-16 87.0 86 51.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.0e-15 86.7 86 58.1
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 3.9e-15 84.7 63 66.7
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 3.3e-14 81.6 66 60.6
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 4.3e-14 81.3 72 58.3
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.6e-13 79.3 68 57.4
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 6.2e-13 77.4 43 76.7
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 6.2e-13 77.4 84 57.1
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 8.1e-13 77.0 80 55.0
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 8.1e-13 77.0 80 55.0
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 1.8e-12 75.9 81 49.4
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.8e-12 75.9 83 56.6
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 5.3e-12 74.3 84 50.0
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 6.9e-12 73.9 69 55.1
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 9.6e-06 53.5 84 40.5


User provided reference genes

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