Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 9.7e-66 253.8 181 100.0
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 5.2e-51 204.9 127 84.3
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 3.4e-50 202.2 127 82.7
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.7e-47 192.6 130 78.5
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.9e-45 186.4 128 78.1
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 7.2e-45 184.5 128 78.1
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 4.0e-43 178.7 89 100.0
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.0e-42 176.4 126 76.2
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 2.6e-42 176.0 126 75.4
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.4e-42 175.3 127 74.0
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 5.7e-42 174.9 126 75.4
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.3e-41 173.7 126 74.6
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.3e-41 173.7 126 74.6
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.7e-41 173.3 127 74.8
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 4.9e-41 171.8 126 72.2
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 8.3e-41 171.0 126 73.8
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.1e-40 170.6 126 73.0
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 4.1e-40 168.7 127 72.4
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.1e-40 168.7 127 71.7
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 5.4e-40 168.3 179 57.0
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.6e-39 166.8 127 71.7
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 1.6e-39 166.8 126 70.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.7e-39 166.0 126 71.4
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 4.5e-39 165.2 128 69.5
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.3e-38 163.7 127 70.9
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.3e-38 163.7 127 70.9
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.3e-38 163.7 127 70.9
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 2.3e-38 162.9 117 74.4
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 2.3e-38 162.9 130 67.7
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.9e-38 162.2 135 69.6
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 5.0e-38 161.8 126 70.6
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 8.6e-38 161.0 128 69.5
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.9e-37 159.8 127 70.9
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 3.3e-37 159.1 127 70.1
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 4.3e-37 158.7 127 68.5
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.3e-37 158.7 128 68.8
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 7.3e-37 157.9 131 67.9
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 1.6e-36 156.8 127 70.1
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 2.1e-36 156.4 127 67.7
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 2.1e-36 156.4 129 67.4
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.1e-36 156.4 127 68.5
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 2.8e-36 156.0 131 70.2
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.6e-36 155.6 116 69.8
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 4.7e-36 155.2 127 66.9
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 6.1e-36 154.8 126 71.4
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 6.1e-36 154.8 127 66.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.0e-35 154.1 127 67.7
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 2.3e-35 152.9 128 69.5
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 4.0e-35 152.1 127 68.5
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 5.2e-35 151.8 95 82.1
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 6.8e-35 151.4 128 68.8
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 6.8e-35 151.4 129 64.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.2e-34 150.6 127 66.9
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.2e-34 150.6 127 66.1
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.2e-34 150.6 127 66.1
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 2.0e-34 149.8 127 65.4
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 2.0e-34 149.8 119 73.1
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 2.6e-34 149.4 127 66.1
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 2.6e-34 149.4 127 66.1
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.6e-34 149.4 117 70.9
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.6e-34 149.4 127 66.1
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 3.4e-34 149.1 132 62.9
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 4.4e-34 148.7 126 67.5
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 7.5e-34 147.9 131 65.6
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 9.8e-34 147.5 169 53.3
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.3e-33 147.1 127 64.6
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.7e-33 146.7 118 68.6
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.7e-33 146.7 127 64.6
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.4e-33 144.8 124 66.1
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 8.3e-33 144.4 124 66.1
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.9e-32 143.3 117 67.5
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.9e-32 143.3 130 66.2
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.9e-32 143.3 129 63.6
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.9e-32 143.3 92 77.2
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 2.4e-32 142.9 128 64.8
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.2e-32 142.5 177 52.0
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 4.1e-32 142.1 120 67.5
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 4.1e-32 142.1 127 65.4
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 4.1e-32 142.1 127 65.4
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 4.1e-32 142.1 127 65.4
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 5.4e-32 141.7 127 63.0
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.2e-31 140.6 127 62.2
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.2e-31 140.6 127 62.2
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.2e-31 140.6 127 62.2
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.2e-31 140.6 127 64.6
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.6e-31 140.2 127 61.4
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.6e-31 140.2 127 62.2
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.6e-31 140.2 114 68.4
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.0e-31 139.8 127 62.2
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.0e-31 139.8 125 64.0
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 3.5e-31 139.0 117 66.7
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 7.8e-31 137.9 127 62.2
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.0e-30 137.5 127 61.4
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.0e-30 137.5 127 61.4
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.7e-30 136.7 127 61.4
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 2.3e-30 136.3 127 60.6
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 2.3e-30 136.3 127 61.4
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 3.0e-30 136.0 177 50.3
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 3.0e-30 136.0 120 65.0
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 5.0e-30 135.2 127 60.6
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 6.6e-30 134.8 132 59.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 6.6e-30 134.8 134 59.7
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 6.6e-30 134.8 112 66.1
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 4.3e-29 132.1 73 90.4
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 5.6e-29 131.7 91 79.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 1.6e-28 130.2 104 70.2
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.6e-28 130.2 129 58.9
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 2.8e-28 129.4 127 58.3
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 4.7e-28 128.6 127 58.3
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 4.7e-28 128.6 127 58.3
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 8.9e-27 124.4 115 61.7
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.5e-26 123.6 98 67.3
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 7.5e-26 121.3 97 69.1
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.7e-25 120.2 127 61.4
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 6.4e-25 118.2 75 78.7
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 1.1e-24 117.5 67 88.1
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 9.2e-24 114.4 98 64.3
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 6.0e-23 111.7 76 75.0
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.0e-22 110.9 131 52.7
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 3.9e-22 109.0 115 55.7
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 4.0e-19 99.0 115 50.4
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 5.2e-19 98.6 77 66.2
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 8.9e-19 97.8 225 35.1
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.2e-16 89.4 79 62.0
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.7e-14 83.6 95 54.7
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 9.6e-13 77.8 130 42.3
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 1.6e-12 77.0 95 48.4
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.5e-10 70.5 60 66.7
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.3e-09 67.4 38 89.5
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 1.4e-08 63.9 48 64.6
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.4e-08 63.9 85 49.4
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 9.3e-08 61.2 80 43.8
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 6.0e-07 58.5 34 82.4


User provided reference genes

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