Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 6.9e-168 594.0 314 100.0
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 7.6e-159 563.9 328 93.0
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.5e-90 337.0 337 62.6
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.2e-87 327.4 353 60.1
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.5e-63 246.1 372 47.8
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.8e-41 172.9 180 58.9
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.6e-36 157.5 177 56.5
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.2e-34 151.4 185 53.0
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-34 150.6 196 51.0
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 7.4e-29 132.1 286 37.4
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.1e-23 114.0 138 53.6
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-09 66.6 226 28.3
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-09 66.6 177 36.2
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-09 66.6 177 36.2
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.5e-09 65.5 160 35.6
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-07 58.9 125 41.6
Thecc.08G074900 Theobroma cacao HOM05D011157 ORTHO05D013820 1.4e-06 58.2 131 36.6
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-06 57.4 178 32.0
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 2.3e-06 57.4 171 31.0
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 3.0e-06 57.0 139 36.7
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 56.2 121 33.1


User provided reference genes

Program Settings