Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036021 Camellia sinensis var. sinensis HOM05D006251 ORTHO05D007695 3.5e-89 331.6 175 100.0
CSS0009604 Camellia sinensis var. sinensis HOM05D006251 ORTHO05D007695 2.4e-29 132.9 189 49.2
Cfa008862 Carpinus fangiana HOM05D006251 ORTHO05D007695 4.3e-26 122.1 71 91.5
ClCG08G010490 Citrullus lanatus HOM05D006251 ORTHO05D007695 1.2e-25 120.6 71 88.7
Haze_20966 Corylus avellana HOM05D006251 ORTHO05D007695 2.1e-25 119.8 72 90.3
MELO3C011414.2 Cucumis melo HOM05D006251 ORTHO05D007695 3.6e-25 119.0 71 87.3
GSVIVG01010778001 Vitis vinifera HOM05D006251 ORTHO05D007695 6.2e-25 118.2 188 44.7
CiPaw.05G123800 Carya illinoinensis HOM05D006251 ORTHO05D007695 1.8e-24 116.7 71 85.9
CsaV3_6G033740 Cucumis sativus L. HOM05D006251 ORTHO05D007695 2.3e-24 116.3 71 85.9
Nn3g17499 Nelumbo nucifera HOM05D006251 ORTHO05D007695 3.1e-24 115.9 72 83.3
Actinidia16152 Actinidia chinensis HOM05D006251 ORTHO05D007695 4.0e-24 115.5 189 45.5
Dinv20151 Davidia involucrata HOM05D006251 ORTHO05D007695 4.0e-24 115.5 187 43.9
TWI79G1568 Tripterygium wilfordii HOM05D006251 ORTHO05D007695 6.8e-24 114.8 70 85.7
Lj3A1029T38 Lonicera japonica HOM05D006251 ORTHO05D007695 1.2e-23 114.0 71 84.5
COL.COLO4_12139 Corchorus olitorius HOM05D006251 ORTHO05D007695 1.5e-23 113.6 71 83.1
MD13G1060000 Malus domestica HOM05D006251 ORTHO05D007695 2.0e-23 113.2 69 85.5
MD16G1059400 Malus domestica HOM05D006251 ORTHO05D007695 2.0e-23 113.2 70 84.3
Gohir.A12G057700 Gossypium hirsutum HOM05D006251 ORTHO05D007695 2.6e-23 112.8 71 83.1
Gohir.D12G057500 Gossypium hirsutum HOM05D006251 ORTHO05D007695 2.6e-23 112.8 71 83.1
Gorai.008G060600 Gossypium raimondii HOM05D006251 ORTHO05D007695 2.6e-23 112.8 71 83.1
Thecc.01G144600 Theobroma cacao HOM05D006251 ORTHO05D007695 2.6e-23 112.8 71 83.1
Haze_11885 Corylus avellana HOM05D006251 ORTHO05D007695 3.4e-23 112.5 66 90.9
Duzib147G1163 Durio zibethinus HOM05D006251 ORTHO05D007695 3.4e-23 112.5 71 83.1
QL03p073745 Quercus lobata HOM05D006251 ORTHO05D007695 4.4e-23 112.1 69 88.4
Manes.01G026600 Manihot esculenta HOM05D006251 ORTHO05D007695 5.8e-23 111.7 73 80.8
Prupe.1G289400 Prunus persica HOM05D006251 ORTHO05D007695 7.5e-23 111.3 70 82.9
Ciclev10032914m.g Citrus clementina HOM05D006251 ORTHO05D007695 9.8e-23 110.9 72 83.3
Lalb_Chr10g0098941 Lupinus albus HOM05D006251 ORTHO05D007695 9.8e-23 110.9 69 82.6
Atru.chr11.1602 Acer truncatum HOM05D006251 ORTHO05D007695 1.7e-22 110.2 187 42.2
Rhsim09G0125900 Rhododendron simsii HOM05D000634 ORTHO05D007695 2.2e-22 109.8 175 46.9
vmacro10437 Vaccinium macrocarpon HOM05D006251 ORTHO05D007695 3.7e-22 109.0 180 45.0
Aqoxy3G00920 Aquilegia oxysepala HOM05D006251 ORTHO05D007695 4.9e-22 108.6 73 78.1
PSO017G1239 Papaver somniferum HOM05D006251 ORTHO05D007695 6.4e-22 108.2 72 77.8
GSVIVG01010785001 Vitis vinifera HOM05D006251 ORTHO05D007695 6.4e-22 108.2 72 80.6
Sc04g0007470 Simmondsia chinensis HOM05D006251 ORTHO05D007695 1.1e-21 107.5 185 42.7
Eucgr.G02430 Eucalyptus grandis HOM05D006251 ORTHO05D007695 1.4e-21 107.1 71 81.7
VMungo1215G0794 Vigna mungo HOM05D006251 ORTHO05D007695 1.4e-21 107.1 69 78.3
PSO478G0833 Papaver somniferum HOM05D006251 ORTHO05D007695 1.9e-21 106.7 72 76.4
Ca_05001_v3 Cicer arietinum L. HOM05D006251 ORTHO05D007695 3.2e-21 105.9 68 77.9
DCAR_030047 Daucus carota HOM05D006251 ORTHO05D007695 3.2e-21 105.9 178 44.4
RcHm_v2.0_Chr4g0437961 Rosa chinensis HOM05D006251 ORTHO05D007695 4.1e-21 105.5 177 44.6
Glyma.02G120500 Glycine max HOM05D006251 ORTHO05D007695 5.4e-21 105.1 68 79.4
BcaC05g25275 Brassica carinata HOM05D006251 ORTHO05D007695 7.1e-21 104.8 71 76.1
C05p11520 Brassica napus HOM05D006251 ORTHO05D007695 7.1e-21 104.8 71 76.1
BolC5t29901H Brassica oleracea HOM05D006251 ORTHO05D007695 7.1e-21 104.8 71 76.1
Carub.0001s1343 Capsella rubella HOM05D006251 ORTHO05D007695 9.2e-21 104.4 73 74.0
Glyma.01G062300 Glycine max HOM05D006251 ORTHO05D007695 9.2e-21 104.4 68 79.4
Sp1g12220 Schrenkiella parvula HOM05D006251 ORTHO05D007695 9.2e-21 104.4 72 75.0
Cc11_g11800 Coffea canephora HOM05D006251 ORTHO05D007695 1.2e-20 104.0 187 41.2
Phvul.003G040600 Phaseolus vulgaris HOM05D006251 ORTHO05D007695 1.2e-20 104.0 69 75.4
BraA06t24166Z Brassica rapa HOM05D006251 ORTHO05D007695 2.1e-20 103.2 71 74.6
PGR119G0343 Punica granatum HOM05D006251 ORTHO05D007695 2.7e-20 102.8 74 75.7
FvH4_4g29710 Fragaria vesca HOM05D006251 ORTHO05D007695 3.5e-20 102.4 70 81.4
FAN07G0390 Fragaria x ananassa HOM05D000634 ORTHO05D007695 3.5e-20 102.4 70 81.4
FAN12G1640 Fragaria x ananassa HOM05D006251 ORTHO05D007695 3.5e-20 102.4 70 81.4
FAN17G1351 Fragaria x ananassa HOM05D006251 ORTHO05D007695 3.5e-20 102.4 70 81.4
FAN22G1444 Fragaria x ananassa HOM05D006251 ORTHO05D007695 3.5e-20 102.4 70 81.4
CANSAT64G0858 Cannabis sativa HOM05D006251 ORTHO05D007695 4.6e-20 102.1 71 78.9
CARHR014090 Cardamine hirsuta HOM05D006251 ORTHO05D007695 6.0e-20 101.7 72 70.8
Thhalv10008898m.g Eutrema salsugineum HOM05D006251 ORTHO05D007695 6.0e-20 101.7 67 77.6
AL1G25480 Arabidopsis lyrata HOM05D006251 ORTHO05D007695 1.0e-19 100.9 73 71.2
BcaB02g06466 Brassica carinata HOM05D006251 ORTHO05D007695 1.3e-19 100.5 71 71.8
Ah.03g138780 Amaranthus hybridus HOM05D006251 ORTHO05D007695 1.7e-19 100.1 179 42.5
HanXRQChr15g0477161 Helianthus annuus HOM05D006251 ORTHO05D007695 2.3e-19 99.8 180 42.8
Nitab4.5_0007615g0010 Nicotiana tabacum HOM05D006251 ORTHO05D007695 3.9e-19 99.0 67 74.6
THA.LOC104812006 Tarenaya hassleriana HOM05D006251 ORTHO05D007695 5.1e-19 98.6 72 75.0
AUR62003081 Chenopodium quinoa HOM05D006251 ORTHO05D007695 6.6e-19 98.2 73 74.0
EL10Ac6g15019 Beta vulgaris HOM05D006251 ORTHO05D007695 8.6e-19 97.8 72 73.6
AT1G13690 Arabidopsis thaliana HOM05D006251 ORTHO05D007695 1.1e-18 97.4 73 68.5
AUR62007897 Chenopodium quinoa HOM05D006251 ORTHO05D007695 1.1e-18 97.4 73 72.6
Lsat_1_v5_gn_3_53680 Lactuca sativa HOM05D006251 ORTHO05D007695 1.9e-18 96.7 180 42.2
Migut.E00044 Erythranthe guttata HOM05D006251 ORTHO05D007695 2.5e-18 96.3 74 70.3
Medtr5g044970 Medicago truncatula HOM05D006251 ORTHO05D007695 2.5e-18 96.3 67 76.1
TPR.G23760 Trifolium pratense HOM05D006251 ORTHO05D007695 2.5e-18 96.3 67 76.1
Aa31LG1G1230 Aethionema arabicum HOM05D006251 ORTHO05D007695 3.3e-18 95.9 66 77.3
TAR622G1376 Trochodendron aralioides HOM05D006251 ORTHO05D007695 3.3e-18 95.9 66 81.8
SalBow2G3351 Salvia bowleyana HOM05D006251 ORTHO05D007695 4.3e-18 95.5 178 42.1
Zm00001eb219260 Zea mays HOM05D006251 ORTHO05D007695 4.3e-18 95.5 178 41.6
Potri.008G097500 Populus trichocarpa HOM05D006251 ORTHO05D007695 5.6e-18 95.1 73 74.0
PGSC0003DMG400001940 Solanum tuberosum HOM05D006251 ORTHO05D007695 2.1e-17 93.2 72 70.8
unitig_22.g6893 Utricularia gibba HOM05D006251 ORTHO05D007695 2.1e-17 93.2 178 41.6
MSTRG.2302 Avicennia marina HOM05D006251 ORTHO05D007695 4.7e-17 92.0 71 71.8
Solyc04g005350.3 Solanum lycopersicum HOM05D006251 ORTHO05D007695 8.1e-17 91.3 179 40.2
Sopen04g001330 Solanum pennellii HOM05D006251 ORTHO05D007695 8.1e-17 91.3 179 40.2
ECA246G1802 Erigeron canadensis HOM05D006251 ORTHO05D007695 1.1e-16 90.9 180 41.7
arahy.Tifrunner.gnm1.ann1.BKZY3B Arachis hypogaea HOM05D006251 ORTHO05D007695 1.8e-16 90.1 71 69.0
arahy.Tifrunner.gnm1.ann1.5K1Z4H Arachis hypogaea HOM05D006251 ORTHO05D007695 6.8e-16 88.2 71 67.6
SGA_v2.0_scaffold59G20670 Striga asiatica HOM05D006251 ORTHO05D007695 1.2e-15 87.4 71 67.6
CDE07G1948 Ceratophyllum demersum HOM05D006251 ORTHO05D007695 2.0e-15 86.7 69 71.0
MBI16_g03090_MAGBIO Magnolia biondii HOM05D006251 ORTHO05D007695 2.6e-15 86.3 58 79.3
HPP92_017644 Vanilla planifolia HOM05D006251 ORTHO05D007695 4.4e-15 85.5 71 66.2
Pp3c23_9430 Physcomitrium patens HOM05D006251 ORTHO05D007695 2.2e-14 83.2 69 68.1
Lj2g0007519 Lotus japonicus HOM05D006251 ORTHO05D007695 2.9e-14 82.8 70 62.9
Migut.K00754 Erythranthe guttata HOM05D006251 ORTHO05D007695 2.4e-13 79.7 61 68.9
Sed0021896 Sechium edule HOM05D006251 ORTHO05D007695 2.4e-13 79.7 71 70.4
Pp3c24_3880 Physcomitrium patens HOM05D006251 ORTHO05D007695 1.6e-12 77.0 69 62.3
Hma1.2p1_0566F.1_g179940 Hydrangea macrophylla HOM05D006251 ORTHO05D007695 1.7e-11 73.6 50 82.0
ATR0827G163 Amborella trichopoda HOM05D006251 ORTHO05D007695 3.0e-11 72.8 67 59.7
Os03g0600400 Oryza sativa ssp. japonica HOM05D006251 ORTHO05D007695 2.5e-10 69.7 54 72.2
SMO356G0608 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 3.8e-06 55.8 50 58.0
Nitab4.5_0008776g0040 Nicotiana tabacum HOM05D006251 ORTHO05D007695 6.4e-06 55.1 72 47.2
Potri.010G157000 Populus trichocarpa HOM05D006251 ORTHO05D007695 6.4e-06 55.1 38 81.6
Nitab4.5_0001118g0050 Nicotiana tabacum HOM05D006251 ORTHO05D007695 8.4e-06 54.7 72 47.2


User provided reference genes

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