Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 6.0e-36 153.7 79 100.0
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 7.3e-34 146.7 79 98.7
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 3.1e-24 114.8 84 77.4
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 4.4e-23 110.9 86 73.3
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 5.8e-23 110.5 80 75.0
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.9e-22 108.2 81 72.8
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.4e-21 105.9 78 71.8
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 1.9e-21 105.5 82 69.5
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 2.1e-20 102.1 77 70.1
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 4.6e-20 100.9 79 69.6
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 6.0e-20 100.5 87 63.2
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 6.0e-20 100.5 87 64.4
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 6.0e-20 100.5 77 70.1
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 6.0e-20 100.5 92 60.9
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 6.0e-20 100.5 88 63.6
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.3e-19 99.4 61 80.3
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 1.7e-19 99.0 86 64.0
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 1.7e-19 99.0 89 65.2
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 1.7e-19 99.0 83 63.9
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 2.3e-19 98.6 74 71.6
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 2.3e-19 98.6 61 78.7
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 3.9e-19 97.8 60 81.7
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 5.1e-19 97.4 85 63.5
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 5.1e-19 97.4 85 61.2
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 5.1e-19 97.4 79 63.3
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 6.6e-19 97.1 87 64.4
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 1.1e-18 96.3 86 59.3
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 1.1e-18 96.3 86 59.3
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 1.1e-18 96.3 86 59.3
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 1.1e-18 96.3 86 59.3
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.1e-18 96.3 74 68.9
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.1e-18 96.3 73 71.2
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 1.5e-18 95.9 72 69.4
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 1.9e-18 95.5 85 63.5
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 1.9e-18 95.5 87 64.4
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 1.9e-18 95.5 68 75.0
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 1.9e-18 95.5 82 63.4
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 1.9e-18 95.5 67 76.1
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 1.9e-18 95.5 74 66.2
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 1.9e-18 95.5 83 62.7
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 2.5e-18 95.1 57 75.4
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 2.5e-18 95.1 79 62.0
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 3.3e-18 94.7 60 80.0
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 4.3e-18 94.4 61 77.0
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 4.3e-18 94.4 86 61.6
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 4.3e-18 94.4 81 64.2
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 4.3e-18 94.4 89 61.8
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 5.6e-18 94.0 85 61.2
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.3e-18 93.6 78 62.8
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.3e-18 93.6 57 82.5
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 7.3e-18 93.6 73 67.1
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 9.6e-18 93.2 80 63.8
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 1.3e-17 92.8 57 77.2
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 1.3e-17 92.8 85 58.8
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 1.6e-17 92.4 71 70.4
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 1.6e-17 92.4 86 61.6
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 2.1e-17 92.0 72 68.1
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.1e-17 92.0 74 68.9
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.8e-17 91.7 57 80.7
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 2.8e-17 91.7 73 67.1
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 2.8e-17 91.7 85 62.4
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 3.6e-17 91.3 78 61.5
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 3.6e-17 91.3 68 69.1
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.6e-17 91.3 73 68.5
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 3.6e-17 91.3 82 61.0
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 3.6e-17 91.3 76 63.2
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 3.6e-17 91.3 62 74.2
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 4.8e-17 90.9 81 63.0
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 4.8e-17 90.9 80 62.5
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 6.2e-17 90.5 68 66.2
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 8.1e-17 90.1 73 65.8
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 1.1e-16 89.7 86 62.8
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 1.8e-16 89.0 78 64.1
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 1.8e-16 89.0 84 59.5
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 3.1e-16 88.2 77 66.2
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 4.0e-16 87.8 92 58.7
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 4.0e-16 87.8 60 73.3
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 6.9e-16 87.0 88 54.5
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 6.9e-16 87.0 78 59.0
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 2.6e-15 85.1 58 75.9
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 5.8e-15 84.0 57 73.7
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 7.6e-15 83.6 73 63.0
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.3e-14 82.8 80 60.0
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 1.7e-14 82.4 84 58.3
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 2.2e-14 82.0 46 82.6
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 8.4e-14 80.1 67 61.2
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 1.1e-13 79.7 76 57.9
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 1.4e-13 79.3 71 59.2
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 3.2e-13 78.2 50 74.0
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 1.2e-12 76.3 67 62.7
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 3.5e-12 74.7 48 70.8
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 7.9e-12 73.6 79 51.9
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 1.0e-11 73.2 49 67.3
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 3.9e-11 71.2 79 54.4
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 2.1e-09 65.5 74 45.9
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 4.5e-07 57.8 62 48.4
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.3e-06 56.2 49 53.1


User provided reference genes

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