Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.6e-80 302.8 162 100.0
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.4e-71 272.3 154 90.9
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.4e-69 263.8 154 93.5
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-63 245.0 162 80.2
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 6.3e-56 221.1 154 80.5
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-54 216.9 131 90.1
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.8e-47 193.0 154 72.1
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 2.4e-47 192.6 152 71.7
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 4.1e-47 191.8 157 72.6
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 6.9e-47 191.0 152 72.4
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.5e-46 189.9 152 71.7
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 1.5e-46 189.9 187 64.7
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 3.4e-46 188.7 158 71.5
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.5e-46 188.3 152 70.4
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 1.3e-45 186.8 155 71.6
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.7e-45 186.4 155 69.7
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 2.2e-45 186.0 154 65.6
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 2.9e-45 185.7 154 61.7
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.8e-45 185.3 155 67.7
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 3.8e-45 185.3 156 69.2
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 8.5e-45 184.1 153 69.9
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.1e-44 183.7 154 69.5
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 2.5e-44 182.6 153 69.3
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 3.2e-44 182.2 159 69.2
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.2e-44 182.2 154 68.8
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.2e-44 182.2 154 69.5
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 3.2e-44 182.2 154 65.6
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 7.2e-44 181.0 155 69.7
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 7.2e-44 181.0 155 69.7
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.1e-43 179.5 154 66.2
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 2.7e-43 179.1 154 62.3
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.6e-43 178.7 156 64.7
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 3.6e-43 178.7 150 68.0
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 7.9e-43 177.6 159 67.3
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.0e-42 177.2 153 68.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-42 176.8 112 91.1
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-42 176.8 112 91.1
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.8e-42 176.4 154 65.6
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.8e-42 176.4 155 67.1
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.8e-42 176.4 155 60.6
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 2.3e-42 176.0 156 66.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 2.3e-42 176.0 154 62.3
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 3.0e-42 175.6 154 64.9
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 3.0e-42 175.6 158 65.8
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 3.0e-42 175.6 155 68.4
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 3.9e-42 175.3 159 64.2
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 6.7e-42 174.5 158 62.0
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 6.7e-42 174.5 156 64.1
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 8.8e-42 174.1 152 62.5
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.1e-41 173.7 156 64.7
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-41 173.3 152 62.5
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.5e-41 173.3 150 68.0
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.5e-41 173.3 154 64.3
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 7.4e-41 171.0 156 64.1
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 7.4e-41 171.0 156 65.4
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.2e-40 169.5 155 67.1
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 2.2e-40 169.5 156 64.1
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 4.8e-40 168.3 153 64.7
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 8.2e-40 167.5 152 61.2
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 8.2e-40 167.5 157 61.1
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.8e-39 166.4 157 61.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.4e-39 166.0 160 60.6
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 2.4e-39 166.0 158 61.4
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 2.4e-39 166.0 158 61.4
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 3.1e-39 165.6 154 59.1
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 4.1e-39 165.2 157 61.1
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 4.1e-39 165.2 157 61.8
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 5.3e-39 164.9 154 61.0
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 6.9e-39 164.5 159 61.0
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.2e-38 163.7 156 60.9
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.5e-38 163.3 158 60.8
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.5e-38 163.3 159 60.4
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 2.0e-38 162.9 155 61.9
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 2.0e-38 162.9 155 62.6
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 3.4e-38 162.2 176 57.4
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 7.7e-38 161.0 155 61.9
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.0e-37 160.6 155 61.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.2e-37 159.5 155 61.3
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 2.9e-37 159.1 157 63.1
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.5e-36 156.0 154 60.4
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 7.9e-35 151.0 146 64.4
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 3.3e-33 145.6 151 62.3
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.3e-32 143.7 155 58.7
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 2.8e-32 142.5 175 52.0
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.4e-31 140.2 154 61.0
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.4e-31 140.2 154 54.5
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 7.7e-30 134.4 153 54.2
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.3e-29 133.7 154 54.5
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.9e-29 132.5 155 54.8
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 8.5e-29 131.0 129 59.7
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 1.5e-28 130.2 157 47.8
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.9e-28 129.8 155 54.8
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 5.5e-28 128.3 134 59.7
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 5.5e-28 128.3 155 52.9
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 7.2e-28 127.9 155 56.8
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.6e-27 126.7 152 53.9
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 4.7e-27 125.2 151 49.7
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.4e-26 123.6 153 48.4
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 4.4e-25 118.6 152 52.6
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 5.7e-25 118.2 110 71.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 7.5e-25 117.9 156 41.7
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 2.8e-24 115.9 153 46.4
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.7e-22 109.4 97 63.9
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.7e-21 106.7 154 50.0
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 4.2e-20 102.1 166 39.2
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 7.2e-20 101.3 96 55.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 3.4e-17 92.4 91 53.8
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 5.9e-14 81.6 178 37.6
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.0e-13 80.9 89 49.4
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 1.6e-11 73.6 45 71.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 8.8e-10 67.8 124 41.1
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.2e-09 67.4 155 38.1
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 2.6e-09 66.2 57 57.9
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 7.5e-09 64.7 64 60.9
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 1.7e-08 63.5 109 40.4
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 9.2e-07 57.8 59 57.6
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.6e-06 57.0 230 24.3


User provided reference genes

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