Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035919 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 4.3e-133 478.0 245 100.0
CSS0035630 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.4e-128 462.2 236 100.0
Dinv06101 Davidia involucrata HOM05D000372 ORTHO05D003436 2.6e-106 389.0 237 84.8
Hma1.2p1_0102F.1_g049740 Hydrangea macrophylla HOM05D000372 ORTHO05D003436 1.2e-103 380.2 237 82.7
Dinv19797 Davidia involucrata HOM05D000372 ORTHO05D003436 1.6e-103 379.8 236 82.6
Thecc.09G009700 Theobroma cacao HOM05D000372 ORTHO05D003436 5.1e-102 374.8 237 80.6
Haze_18342 Corylus avellana HOM05D000372 ORTHO05D003436 1.1e-101 373.6 237 80.2
Lj7C743T9 Lonicera japonica HOM05D000372 ORTHO05D003436 1.9e-101 372.9 238 81.9
CANSAT25G2139 Cannabis sativa HOM05D000372 ORTHO05D003436 4.3e-101 371.7 235 80.0
Cfa017850 Carpinus fangiana HOM05D000372 ORTHO05D003436 5.7e-101 371.3 237 79.3
QL02p017417 Quercus lobata HOM05D000372 ORTHO05D003436 2.8e-100 369.0 237 79.7
TAR383G1081 Trochodendron aralioides HOM05D000372 ORTHO05D003436 3.7e-100 368.6 237 79.3
Duzib187G1714 Durio zibethinus HOM05D000372 ORTHO05D003436 3.1e-99 365.5 237 78.9
Duzib150G0268 Durio zibethinus HOM05D000372 ORTHO05D003436 9.0e-99 364.0 237 79.7
CiPaw.16G070900 Carya illinoinensis HOM05D000372 ORTHO05D003436 2.0e-98 362.8 237 78.9
Cpa.g.sc23.44 Carica papaya HOM05D000372 ORTHO05D003436 2.6e-98 362.5 237 77.6
vmacro05111 Vaccinium macrocarpon HOM05D000372 ORTHO05D003436 2.6e-98 362.5 236 80.5
Prupe.1G400900 Prunus persica HOM05D000372 ORTHO05D003436 5.9e-98 361.3 237 77.2
Eucgr.C04019 Eucalyptus grandis HOM05D000372 ORTHO05D003436 7.6e-98 360.9 237 77.6
Gorai.009G066300 Gossypium raimondii HOM05D000372 ORTHO05D003436 1.7e-97 359.8 237 77.6
Gohir.A05G062700 Gossypium hirsutum HOM05D000372 ORTHO05D003436 2.2e-97 359.4 237 77.2
Gohir.D05G065500 Gossypium hirsutum HOM05D000372 ORTHO05D003436 2.2e-97 359.4 237 77.6
Rhsim07G0169300 Rhododendron simsii HOM05D000372 ORTHO05D003436 2.2e-97 359.4 236 78.4
Gohir.D05G065200 Gossypium hirsutum HOM05D000372 ORTHO05D003436 6.5e-97 357.8 237 77.2
Gorai.009G066000 Gossypium raimondii HOM05D000372 ORTHO05D003436 6.5e-97 357.8 237 77.2
Ca_15798_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 1.4e-96 356.7 239 78.2
Gohir.A05G063000 Gossypium hirsutum HOM05D000372 ORTHO05D003436 5.5e-96 354.8 237 77.2
Phvul.009G084900 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 1.2e-95 353.6 238 76.1
TPR.G21426 Trifolium pratense HOM05D000372 ORTHO05D003436 1.6e-95 353.2 240 77.1
TWI63G0489 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 1.6e-95 353.2 236 73.7
VMungo1309G2648 Vigna mungo HOM05D000372 ORTHO05D003436 4.6e-95 351.7 238 76.5
Lsat_1_v5_gn_3_25440 Lactuca sativa HOM05D000372 ORTHO05D003436 7.9e-95 350.9 236 73.7
Duzib168G1416 Durio zibethinus HOM05D000372 ORTHO05D003436 1.0e-94 350.5 237 75.1
CSS0024843 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.8e-94 349.7 246 74.0
arahy.Tifrunner.gnm1.ann1.IKLL4G Arachis hypogaea HOM05D000372 ORTHO05D003436 3.0e-94 349.0 237 75.9
Atru.chr7.2608 Acer truncatum HOM05D000372 ORTHO05D003436 3.9e-94 348.6 237 75.5
Glyma.17G220800 Glycine max HOM05D000372 ORTHO05D003436 5.1e-94 348.2 239 74.9
MD08G1047400 Malus domestica HOM05D000372 ORTHO05D003436 5.1e-94 348.2 237 74.3
TWI32G0796 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 1.1e-93 347.1 236 72.0
Glyma.04G058400 Glycine max HOM05D000372 ORTHO05D003436 1.5e-93 346.7 238 74.8
CsaV3_4G036290 Cucumis sativus L. HOM05D000372 ORTHO05D003436 1.9e-93 346.3 237 75.5
arahy.Tifrunner.gnm1.ann1.2363PW Arachis hypogaea HOM05D000372 ORTHO05D003436 4.3e-93 345.1 237 75.1
Lsat_1_v5_gn_5_62200 Lactuca sativa HOM05D000372 ORTHO05D003436 4.3e-93 345.1 238 73.5
HanXRQChr06g0174111 Helianthus annuus HOM05D000372 ORTHO05D003436 5.7e-93 344.7 236 72.9
Medtr3g105590 Medicago truncatula HOM05D000372 ORTHO05D003436 7.4e-93 344.4 240 75.4
MELO3C016937.2 Cucumis melo HOM05D000372 ORTHO05D003436 9.7e-93 344.0 237 75.1
COL.COLO4_19011 Corchorus olitorius HOM05D000372 ORTHO05D003436 1.3e-92 343.6 237 74.7
ClCG05G016010 Citrullus lanatus HOM05D000372 ORTHO05D003436 2.2e-92 342.8 237 74.7
Nn8g40299 Nelumbo nucifera HOM05D000372 ORTHO05D003436 2.2e-92 342.8 231 76.2
Glyma.U003300 Glycine max HOM05D000372 ORTHO05D003436 3.7e-92 342.0 238 73.5
Phvul.001G043600 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 4.8e-92 341.7 239 72.8
Cc08_g06200 Coffea canephora HOM05D000372 ORTHO05D003436 1.1e-91 340.5 238 74.4
Sed0022125 Sechium edule HOM05D000372 ORTHO05D003436 1.1e-91 340.5 237 73.8
VMungo0647G1491 Vigna mungo HOM05D000372 ORTHO05D003436 1.8e-91 339.7 239 72.4
arahy.Tifrunner.gnm1.ann1.54Q5ZL Arachis hypogaea HOM05D000372 ORTHO05D003436 2.4e-91 339.3 237 73.0
MD15G1046500 Malus domestica HOM05D000372 ORTHO05D003436 2.4e-91 339.3 237 71.3
Psat5g033760 Pisum sativum HOM05D000372 ORTHO05D003436 2.4e-91 339.3 239 74.5
Oeu008769.1 Olea europaea HOM05D000372 ORTHO05D003436 3.1e-91 339.0 237 74.7
Sed0000787 Sechium edule HOM05D000372 ORTHO05D003436 4.1e-91 338.6 237 73.0
arahy.Tifrunner.gnm1.ann1.672M4G Arachis hypogaea HOM05D000372 ORTHO05D003436 5.3e-91 338.2 237 72.6
Nitab4.5_0000502g0160 Nicotiana tabacum HOM05D000372 ORTHO05D003436 1.2e-90 337.0 240 75.0
ECA240G4325 Erigeron canadensis HOM05D000372 ORTHO05D003436 5.9e-90 334.7 238 69.7
ATR0580G441 Amborella trichopoda HOM05D000372 ORTHO05D003436 1.0e-89 334.0 237 70.9
Ciclev10010162m.g Citrus clementina HOM05D000372 ORTHO05D003436 1.0e-89 334.0 236 73.3
SalBow8G1746 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.3e-89 333.6 237 73.0
SalBow8G4869 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.3e-89 333.6 237 73.0
MBI14_g24282_MAGBIO Magnolia biondii HOM05D000372 ORTHO05D003436 1.7e-89 333.2 237 70.9
Nitab4.5_0006884g0010 Nicotiana tabacum HOM05D000372 ORTHO05D003436 1.7e-89 333.2 240 74.2
Lj1g0015187 Lotus japonicus HOM05D000372 ORTHO05D003436 2.2e-89 332.8 238 73.1
PGSC0003DMG400029542 Solanum tuberosum HOM05D000372 ORTHO05D003436 2.2e-89 332.8 240 74.2
Aqoxy7G03181 Aquilegia oxysepala HOM05D000372 ORTHO05D003436 2.9e-89 332.4 237 73.0
Sopen08g022620 Solanum pennellii HOM05D000372 ORTHO05D003436 2.9e-89 332.4 240 74.6
Solyc08g068960.3 Solanum lycopersicum HOM05D000372 ORTHO05D003436 3.8e-89 332.0 240 74.2
Manes.03G005600 Manihot esculenta HOM05D000372 ORTHO05D003436 1.9e-88 329.7 239 71.1
Manes.16G133700 Manihot esculenta HOM05D000372 ORTHO05D003436 1.9e-88 329.7 233 72.1
Migut.E01430 Erythranthe guttata HOM05D000372 ORTHO05D003436 2.5e-88 329.3 236 72.5
Lj5g0022261 Lotus japonicus HOM05D000372 ORTHO05D003436 4.2e-88 328.6 240 71.2
CAN.G808.7 Capsicum annuum HOM05D000372 ORTHO05D003436 9.4e-88 327.4 241 72.6
ECA246G0477 Erigeron canadensis HOM05D000372 ORTHO05D003436 1.6e-87 326.6 236 68.6
Oeu023248.1 Olea europaea HOM05D000372 ORTHO05D003436 1.6e-87 326.6 237 73.4
RcHm_v2.0_Chr6g0304671 Rosa chinensis HOM05D000372 ORTHO05D003436 1.6e-87 326.6 238 71.0
Ca_13081_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 6.1e-87 324.7 241 70.1
Lalb_Chr14g0375411 Lupinus albus HOM05D000372 ORTHO05D003436 6.1e-87 324.7 237 71.3
Potri.006G270500 Populus trichocarpa HOM05D000372 ORTHO05D003436 7.9e-87 324.3 236 69.5
PGR044G0422 Punica granatum HOM05D000372 ORTHO05D003436 7.9e-87 324.3 237 67.1
Potri.018G011400 Populus trichocarpa HOM05D000372 ORTHO05D003436 1.4e-86 323.6 236 69.9
Sabra06G0210300 Salix brachista HOM05D000372 ORTHO05D003436 1.4e-86 323.6 236 69.5
Peaxi162Scf00288g01010 Petunia axillaris HOM05D000372 ORTHO05D003436 2.3e-86 322.8 240 70.8
FAN27G2462 Fragaria x ananassa HOM05D000372 ORTHO05D003436 6.7e-86 321.2 240 70.8
FAN20G1896 Fragaria x ananassa HOM05D000372 ORTHO05D003436 8.8e-86 320.9 240 70.8
Lsat_1_v5_gn_3_116581 Lactuca sativa HOM05D000372 ORTHO05D003436 2.0e-85 319.7 236 68.6
FvH4_2g37120 Fragaria vesca HOM05D000372 ORTHO05D003436 4.4e-85 318.5 240 70.8
Psat6g023640 Pisum sativum HOM05D000372 ORTHO05D003436 4.4e-85 318.5 241 69.7
Psat7g193560 Pisum sativum HOM05D000372 ORTHO05D003436 4.4e-85 318.5 241 69.7
HanXRQChr03g0082521 Helianthus annuus HOM05D000372 ORTHO05D003436 5.7e-85 318.2 222 72.1
FAN15G3394 Fragaria x ananassa HOM05D000372 ORTHO05D003436 7.4e-85 317.8 240 69.6
Sabra18G0012300 Salix brachista HOM05D000372 ORTHO05D003436 9.7e-85 317.4 236 68.6
DCAR_003039 Daucus carota HOM05D000372 ORTHO05D003436 2.2e-84 316.2 236 67.8
SalBow4G3322 Salvia bowleyana HOM05D000372 ORTHO05D003436 8.2e-84 314.3 237 68.8
Medtr1g013360 Medicago truncatula HOM05D000372 ORTHO05D003436 9.1e-83 310.8 242 68.6
THA.LOC104819942 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 5.0e-81 305.1 237 65.8
TPR.G38926 Trifolium pratense HOM05D000372 ORTHO05D003436 3.2e-80 302.4 224 68.8
EL10Ac2g02429 Beta vulgaris HOM05D000372 ORTHO05D003436 1.4e-78 297.0 240 64.2
Sc23g0006190 Simmondsia chinensis HOM05D000372 ORTHO05D003436 1.8e-78 296.6 237 63.3
Migut.A00416 Erythranthe guttata HOM05D000372 ORTHO05D003436 3.9e-78 295.4 242 68.2
Sc09g0010830 Simmondsia chinensis HOM05D000372 ORTHO05D003436 5.2e-78 295.0 237 62.9
HPP92_011627 Vanilla planifolia HOM05D000372 ORTHO05D003436 1.3e-76 290.4 237 64.6
Hund25587 Selenicereus undatus HOM05D000372 ORTHO05D003436 1.1e-75 287.3 237 61.2
SGA_v2.0_scaffold121G33025 Striga asiatica HOM05D000372 ORTHO05D003436 3.1e-75 285.8 233 66.5
Actinidia23121 Actinidia chinensis HOM05D000372 ORTHO05D003436 3.8e-73 278.9 241 67.2
DCAR_003038 Daucus carota HOM05D000372 ORTHO05D003436 2.5e-72 276.2 235 59.6
PSO063G4267 Papaver somniferum HOM05D000372 ORTHO05D003436 1.6e-71 273.5 238 62.6
PSO782G1259 Papaver somniferum HOM05D000372 ORTHO05D003436 1.6e-71 273.5 238 62.6
SEGI_17810 Sequoiadendron giganteum HOM05D000372 ORTHO05D003436 2.7e-71 272.7 236 59.3
TPR.G38882 Trifolium pratense HOM05D000372 ORTHO05D003436 1.4e-70 270.4 222 64.9
CSS0002412 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.3e-70 269.6 235 64.7
CSS0030725 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.3e-68 263.8 236 63.1
THA.LOC104803327 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 2.7e-66 256.1 237 57.0
CSS0018460 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.7e-65 253.4 189 72.5
AUR62037701 Chenopodium quinoa HOM05D000372 ORTHO05D003436 1.7e-65 253.4 233 57.5
HanXRQChr06g0174121 Helianthus annuus HOM05D000372 ORTHO05D003436 1.5e-64 250.4 231 58.9
Sp6g32740 Schrenkiella parvula HOM05D000372 ORTHO05D003436 4.7e-63 245.4 237 54.4
Thhalv10012606m.g Eutrema salsugineum HOM05D000372 ORTHO05D003436 1.4e-62 243.8 237 54.0
AL6G21260 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 1.8e-62 243.4 237 53.6
AT5G10720 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 6.8e-62 241.5 237 54.9
BcaB01g05503 Brassica carinata HOM05D000372 ORTHO05D003436 1.2e-61 240.7 237 53.2
C03p05430 Brassica napus HOM05D000372 ORTHO05D003436 1.2e-61 240.7 237 53.2
BolC3t13054H Brassica oleracea HOM05D000372 ORTHO05D003436 1.2e-61 240.7 237 53.2
BcaC03g13326 Brassica carinata HOM05D000372 ORTHO05D003436 1.5e-61 240.4 236 53.4
BolC2t06420H Brassica oleracea HOM05D000372 ORTHO05D003436 1.5e-61 240.4 236 53.4
BcaC04g19290 Brassica carinata HOM05D000372 ORTHO05D003436 3.4e-61 239.2 237 52.3
C09p66090 Brassica napus HOM05D000372 ORTHO05D003436 4.4e-61 238.8 237 52.3
BolC9t59429H Brassica oleracea HOM05D000372 ORTHO05D003436 4.4e-61 238.8 237 52.3
BraA10t44741Z Brassica rapa HOM05D000372 ORTHO05D003436 4.4e-61 238.8 237 52.3
A03p04730 Brassica napus HOM05D000372 ORTHO05D003436 7.5e-61 238.0 237 51.9
A10p26890 Brassica napus HOM05D000372 ORTHO05D003436 7.5e-61 238.0 237 52.3
BraA03t09813Z Brassica rapa HOM05D000372 ORTHO05D003436 7.5e-61 238.0 238 52.1
C02p04600 Brassica napus HOM05D000372 ORTHO05D003436 2.2e-60 236.5 236 52.5
A02p00610 Brassica napus HOM05D000372 ORTHO05D003436 3.7e-60 235.7 236 53.0
BraA02t05044Z Brassica rapa HOM05D000372 ORTHO05D003436 3.7e-60 235.7 236 53.0
Carub.0006s0919 Capsella rubella HOM05D000372 ORTHO05D003436 3.7e-60 235.7 237 51.5
CARHR202600 Cardamine hirsuta HOM05D000372 ORTHO05D003436 3.7e-60 235.7 242 51.2
Ah.10g025030 Amaranthus hybridus HOM05D000372 ORTHO05D003436 6.3e-60 235.0 202 60.9
BcaB01g06273 Brassica carinata HOM05D000372 ORTHO05D003436 6.3e-60 235.0 237 51.5
Aa31LG3G16390 Aethionema arabicum HOM05D000372 ORTHO05D003436 1.1e-59 234.2 237 52.7
BcaB05g21500 Brassica carinata HOM05D000372 ORTHO05D003436 1.1e-59 234.2 232 53.9
Medtr1g014670 Medicago truncatula HOM05D000372 ORTHO05D003436 1.8e-59 233.4 201 63.7
Sp2g22540 Schrenkiella parvula HOM05D000372 ORTHO05D003436 1.8e-59 233.4 235 51.9
Sp2g06120 Schrenkiella parvula HOM05D000372 ORTHO05D003436 4.1e-59 232.3 237 52.3
GSVIVG01033164001 Vitis vinifera HOM05D000372 ORTHO05D003436 9.1e-59 231.1 237 55.3
Aa31LG3G16410 Aethionema arabicum HOM05D000372 ORTHO05D003436 1.6e-58 230.3 237 52.3
AUR62020299 Chenopodium quinoa HOM05D000372 ORTHO05D003436 1.3e-57 227.3 177 65.0
BcaB01g06275 Brassica carinata HOM05D000372 ORTHO05D003436 1.7e-57 226.9 241 51.9
A03p04720 Brassica napus HOM05D000372 ORTHO05D003436 3.8e-57 225.7 237 51.5
BraA03t09812Z Brassica rapa HOM05D000372 ORTHO05D003436 3.8e-57 225.7 237 51.5
Migut.E00913 Erythranthe guttata HOM05D000372 ORTHO05D003436 6.5e-57 224.9 208 61.5
BcaB08g37314 Brassica carinata HOM05D000372 ORTHO05D003436 1.2e-55 220.7 237 50.2
Os06g0654300 Oryza sativa ssp. japonica HOM05D000372 ORTHO05D003436 6.8e-54 214.9 238 50.8
AL6G21200 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 1.3e-52 210.7 238 50.8
Rhsim07G0169400 Rhododendron simsii HOM05D000372 ORTHO05D003436 7.0e-51 204.9 155 70.3
Psat6g023560 Pisum sativum HOM05D000372 ORTHO05D003436 1.2e-50 204.1 200 58.0
Sc23g0007090 Simmondsia chinensis HOM05D000372 ORTHO05D003436 1.9e-48 196.8 153 64.7
Zm00001eb274910 Zea mays HOM05D000372 ORTHO05D003436 3.3e-48 196.1 230 48.3
Zm00001eb389570 Zea mays HOM05D000372 ORTHO05D003436 5.6e-48 195.3 237 46.8
CARHR155340 Cardamine hirsuta HOM05D000372 ORTHO05D003436 5.7e-45 185.3 228 48.2
PSO170G2710 Papaver somniferum HOM05D000372 ORTHO05D003436 5.7e-45 185.3 195 56.4
Aa31sc15G100 Aethionema arabicum HOM05D000372 ORTHO05D003436 2.7e-42 176.4 237 46.0
Oeu008770.2 Olea europaea HOM05D000372 ORTHO05D003436 5.9e-42 175.3 237 45.6
AT5G10680 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 7.8e-34 148.3 165 50.3
arahy.Tifrunner.gnm1.ann1.CV2UMV Arachis hypogaea HOM05D000372 ORTHO05D003436 8.9e-30 134.8 92 78.3
Mapoly0139s0010 Marchantia polymorpha HOM05D000372 ORTHO05D003436 2.2e-28 130.2 229 40.2
Pp3c1_9540 Physcomitrium patens HOM05D000372 ORTHO05D003436 3.8e-20 102.8 237 32.1
Pp3c1_29920 Physcomitrium patens HOM05D000372 ORTHO05D003436 4.9e-20 102.4 241 31.1
SMO271G0024 Selaginella moellendorffii HOM05D000372 ORTHO05D003436 1.1e-19 101.3 177 40.1
Glyma.18G115250 Glycine max HOM05D000372 ORTHO05D003436 3.5e-18 96.3 75 62.7
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 4.6e-18 95.9 86 64.0
Pp3c2_36790 Physcomitrium patens HOM05D000372 ORTHO05D003436 6.6e-17 92.0 241 31.5
BcaB01g05505 Brassica carinata HOM05D000372 ORTHO05D003436 5.4e-11 72.4 70 52.9
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 7.8e-10 68.6 64 54.7
A08p23760 Brassica napus HOM05D000372 ORTHO05D003436 9.6e-08 61.6 119 36.1


User provided reference genes

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