Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 3.8e-132 474.9 257 100.0
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 5.6e-91 338.2 248 77.4
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 4.9e-79 298.5 257 62.3
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 1.9e-75 286.6 287 62.4
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 1.1e-73 280.8 256 60.5
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 3.8e-71 272.3 257 60.7
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 6.4e-71 271.6 253 58.9
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.1e-70 270.8 263 57.4
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.1e-70 270.8 257 58.8
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 1.1e-67 260.8 260 58.5
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 5.6e-67 258.5 221 64.7
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 2.1e-66 256.5 262 58.4
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 2.1e-66 256.5 258 58.5
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 2.8e-66 256.1 254 58.7
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 6.2e-66 255.0 259 57.1
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 8.1e-66 254.6 261 57.1
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.4e-65 253.8 259 56.8
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.8e-65 253.4 260 57.7
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 1.3e-63 247.3 281 57.7
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 4.9e-63 245.4 259 56.8
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 4.9e-63 245.4 259 56.8
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.2e-62 242.7 259 56.4
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 4.2e-62 242.3 259 56.4
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 5.4e-62 241.9 254 57.1
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.7e-61 239.6 259 55.2
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.7e-61 239.6 259 55.2
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 4.6e-61 238.8 271 52.4
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 2.5e-59 233.0 258 55.4
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 2.1e-58 229.9 229 58.1
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 2.8e-58 229.6 257 55.3
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.1e-57 227.6 256 50.8
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 2.4e-57 226.5 251 53.4
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 3.1e-57 226.1 245 54.7
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 9.0e-57 224.6 224 57.1
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 3.4e-56 222.6 242 52.9
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 1.7e-55 220.3 250 56.0
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.7e-55 220.3 227 54.6
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 1.7e-55 220.3 260 51.2
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 6.4e-55 218.4 235 53.6
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 8.4e-55 218.0 259 50.2
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.9e-54 216.9 254 58.3
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 5.4e-54 215.3 258 50.0
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 2.7e-53 213.0 263 52.1
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 1.3e-52 210.7 260 49.2
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 1.3e-52 210.7 237 53.6
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.8e-52 210.3 258 53.9
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 2.3e-52 209.9 252 48.8
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 3.0e-52 209.5 227 54.2
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 3.9e-52 209.1 207 57.5
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 8.7e-52 208.0 253 50.6
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 1.5e-51 207.2 250 52.4
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 4.3e-51 205.7 250 51.6
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.3e-50 204.1 249 51.8
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 2.1e-50 203.4 254 49.6
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 1.1e-49 201.1 199 59.8
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 3.1e-49 199.5 201 55.2
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 4.0e-49 199.1 240 50.0
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 4.0e-49 199.1 222 53.2
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 5.3e-49 198.7 216 53.2
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.5e-48 197.2 201 54.7
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.5e-48 197.2 201 54.7
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 2.6e-48 196.4 283 46.6
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.6e-48 196.4 226 52.2
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 2.6e-48 196.4 261 44.8
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 4.5e-48 195.7 217 53.0
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 5.8e-48 195.3 229 52.0
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 7.6e-48 194.9 199 55.8
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 7.6e-48 194.9 227 51.5
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.3e-47 194.1 227 51.1
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 2.9e-47 193.0 253 48.6
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 5.5e-46 188.7 235 46.0
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 7.1e-46 188.3 197 54.8
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.2e-45 187.6 298 44.3
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.6e-45 187.2 247 47.4
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 3.5e-45 186.0 235 54.5
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 6.0e-45 185.3 270 48.9
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 1.0e-44 184.5 234 47.0
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 1.3e-44 184.1 224 49.1
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.3e-44 183.3 212 50.0
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 2.3e-44 183.3 221 54.3
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 2.3e-44 183.3 237 47.3
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 5.1e-44 182.2 216 49.1
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 5.1e-44 182.2 297 42.4
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 8.7e-44 181.4 276 46.0
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 5.6e-43 178.7 186 53.2
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 7.4e-43 178.3 240 46.2
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 2.8e-42 176.4 184 55.4
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 1.1e-41 174.5 244 46.7
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.1e-41 174.5 148 59.5
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 2.6e-40 169.9 137 62.8
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 2.5e-38 163.3 267 43.1
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 3.2e-38 162.9 267 43.1
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 2.7e-37 159.8 130 61.5
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.8e-36 157.1 176 54.0
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 2.3e-36 156.8 189 49.7
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 3.1e-33 146.4 133 59.4
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 4.5e-32 142.5 244 40.6
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.4e-30 137.5 187 47.6
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.9e-30 137.1 105 64.8
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 1.2e-29 134.4 269 36.1
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 5.7e-27 125.6 226 38.5
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 1.1e-25 121.3 183 42.1
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.3e-23 114.4 139 46.0
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 2.5e-22 110.2 135 46.7
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 3.2e-22 109.8 192 39.6
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 9.4e-22 108.2 135 45.9
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.2e-21 107.8 239 38.5
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 2.1e-21 107.1 147 47.6
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 1.2e-16 91.3 66 66.7
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 2.2e-15 87.0 101 55.4
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 1.4e-14 84.3 136 41.9
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 4.7e-13 79.3 127 47.2
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 6.1e-13 79.0 127 47.2
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 3.9e-12 76.3 50 72.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 6.7e-12 75.5 52 65.4
PGSC0003DMG402008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 1.4e-09 67.8 46 58.7
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 1.8e-09 67.4 101 53.5
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 2.0e-08 63.9 78 50.0
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 2.2e-07 60.5 105 46.7
A03p08120 Brassica napus HOM05D006369 ORTHO05D007764 9.4e-06 55.1 172 34.9
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 9.4e-06 55.1 131 35.1
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 9.4e-06 55.1 59 57.6


User provided reference genes

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